HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:45.3 nTPM
HPA Brain:90.1 nTPM
GTEx:45.3 nTPM
FANTOM5:13.1 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:66.6 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 90.1
Sample id Sample description nTPM
Hippocampus
nTPM: 78.2
2621 Female, age 67, right hemisphere 91.9
1911 Female, age 85, right hemisphere 86.4
2148 Female, age 91, left hemisphere 83.3
1855 Male, age 76, left hemisphere 79.0
1898 Male, age 80, left hemisphere 71.7
2529 Female, age 94, left hemisphere 56.7
Dentate gyrus
nTPM: 74.2
1927 Female, age 91, both hemispheres 104.1
2531 Female, age 67, both hemispheres 82.5
2530 Female, age 94, left hemisphere 78.7
2010 Male, age 76, both hemispheres 72.4
2528 Male, age 74, both hemispheres 54.6
2246 Female, age 85, both hemispheres 52.9
Entorhinal gyrus
nTPM: 54.4
2613 Female, age 94, left hemisphere 76.2
2686 Male, age 75, right hemisphere 56.5
2764 Male, age 80, right hemisphere 55.4
1787 Male, age 76, left hemisphere 52.1
1938 Female, age 85, left hemisphere 47.0
2117 Female, age 91, right hemisphere 39.0
Hippocampus, CA1
nTPM: 83.9
2749 Male, age 80, left hemisphere 152.5
2527 Male, age 74, both hemispheres 79.5
1873 Female, age 85, both hemispheres 71.4
2045 Male, age 76, both hemispheres 68.1
2082 Female, age 91, right hemisphere 47.8
Hippocampus, CA2
nTPM: 65.8
1963 Male, age 80, left hemisphere 96.5
1892 Male, age 76, both hemispheres 85.5
2249 Male, age 74, both hemispheres 69.1
2437 Female, age 94, left hemisphere 58.2
2113 Female, age 91, right hemisphere 51.4
1940 Female, age 85, left hemisphere 34.2
Hippocampus, CA3
nTPM: 90.1
2137 Male, age 80, left hemisphere 155.9
2861 Female, age 67, both hemispheres 101.9
2620 Female, age 94, left hemisphere 91.1
1867 Male, age 76, both hemispheres 88.0
2436 Male, age 74, both hemispheres 56.4
1891 Female, age 85, both hemispheres 47.2
Parahippocampal cortex
nTPM: 54.5
2245 Female, age 91, both hemispheres 90.5
2622 Female, age 67, right hemisphere 71.8
2018 Male, age 76, both hemispheres 56.4
2250 Female, age 67, right hemisphere 54.8
2693 Female, age 94, both hemispheres 52.6
1990 Female, age 91, right hemisphere 46.6
2532 Female, age 72, left hemisphere 45.8
1850 Male, age 80, both hemispheres 45.0
2692 Male, age 74, both hemispheres 41.5
1933 Female, age 85, both hemispheres 39.9
Perirhinal gyrus
nTPM: 48.5
2521 Female, age 94, right hemisphere 55.6
1847 Female, age 91, left hemisphere 53.0
1794 Male, age 80, right hemisphere 52.5
1841 Female, age 85, right hemisphere 41.8
2848 Male, age 76, right hemisphere 39.9
Subiculum
nTPM: 53.6
1901 Male, age 80, both hemispheres 76.6
2042 Male, age 76, both hemispheres 69.0
1977 Female, age 85, both hemispheres 47.2
2438 Female, age 94, left hemisphere 45.6
2619 Male, age 74, both hemispheres 43.5
2729 Female, age 91, right hemisphere 39.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.3
Samples: 197

Max nTPM: 183.2
Min nTPM: 2.0
Std nTPM: 26.5
Median nTPM: 40.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 183.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 135.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 114.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 101.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 101.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 101.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 100.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 95.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 94.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 93.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 90.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.1
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 9.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.1
Pig sample Sample description nTPM
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 10.7
Min nTPM: 7.1
Sample A Female 8.5
Sample B Female 7.1
Sample C Male 10.7
Sample D Male 7.8
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.5
Sample A Female 12.1
Sample B Female 12.5
Sample C Male 10.1
Sample D Male 9.5
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.5
Sample A Female 8.5
Sample B Female 9.0
Sample C Male 11.0
Sample D Male 10.1
Ventral hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 7.6
Sample A Female 8.4
Sample B Female 7.6
Sample C Male 11.3
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 66.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.7
Samples: 4

Max nTPM: 41.8
Min nTPM: 39.4
Sample A Male 41.8
Sample B Male 41.8
Sample C Female 39.4
Sample D Female 39.8
Hippocampal formation
nTPM: 66.6
Samples: 4

Max nTPM: 85.8
Min nTPM: 49.7
Sample A Male 49.7
Sample B Male 71.1
Sample C Female 85.8
Sample D Female 59.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
68799059 Antisense, RP_050217_01_H12, Mouse strain C57BL/6J (56 days, male) 12.1

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