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CALM1
HPA
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  • CALM1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CALM1
Synonyms CALML2, CAMI, DD132, PHKD, PHKD1
Gene descriptioni

Full gene name according to HGNC.

Calmodulin 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
FDA approved drug targets
Human disease related genes
Metabolic proteins
RAS pathway related proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q32.11
Chromosome location (bp) 90396502 - 90408268
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000198668 (version 109)
Entrez gene 801
HGNC HGNC:1442
UniProt P0DP23 (UniProt - Evidence at protein level)
neXtProt NX_P0DP23
GeneCards CALM1
Antibodypedia CALM1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Calmodulin acts as part of a calcium signal transduction pathway by mediating the control of a large number of enzymes, ion channels, aquaporins and other proteins through calcium-binding 1, 2, 3, 4, 5, 6, 7. Calcium-binding is required for the activation of calmodulin 8, 9, 10, 11, 12, 13, 14. Among the enzymes to be stimulated by the calmodulin-calcium complex are a number of protein kinases, such as myosin light-chain kinases and calmodulin-dependent protein kinase type II (CaMK2), and phosphatases 15, 16, 17, 18, 19, 20, 21. Together with CCP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis 22. Is a regulator of voltage-dependent L-type calcium channels 23. Mediates calcium-dependent inactivation of CACNA1C 24. Positively regulates calcium-activated potassium channel activity of KCNN2 25. Forms a potassium channel complex with KCNQ1 and regulates electrophysiological activity of the channel via calcium-binding 26. Acts as a sensor to modulate the endoplasmic reticulum contacts with other organelles mediated by VMP1:ATP2A2 27.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes one of three calmodulin proteins which are members of the EF-hand calcium-binding protein family. Calcium-induced activation of calmodulin regulates and modulates the function of cardiac ion channels. Two pseudogenes have been identified on chromosome 7 and X. Multiple transcript variants encoding different isoforms have been found for this gene.A missense mutation in the CALM1 gene has been associated with ventricular tachycardia.[provided by RefSeq, May 2020]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CALM1-201
ENSP00000349467
ENST00000356978
P0DP23
[Direct mapping] Calmodulin-1
Show all
B4DJ51
[Target identity:100%; Query identity:100%] Calmodulin 1 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin 3 (Phosphorylase kinase, delta), isoform CRA_b; Epididymis secretory protein Li 72; cDNA FLJ61744, highly similar to Calmodulin
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000086 [G2/M transition of mitotic cell cycle]
GO:0000922 [spindle pole]
GO:0002027 [regulation of heart rate]
GO:0005509 [calcium ion binding]
GO:0005513 [detection of calcium ion]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005815 [microtubule organizing center]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005876 [spindle microtubule]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0008076 [voltage-gated potassium channel complex]
GO:0008179 [adenylate cyclase binding]
GO:0010800 [positive regulation of peptidyl-threonine phosphorylation]
GO:0010801 [negative regulation of peptidyl-threonine phosphorylation]
GO:0010856 [adenylate cyclase activator activity]
GO:0010880 [regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0010881 [regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion]
GO:0016020 [membrane]
GO:0016240 [autophagosome membrane docking]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0019855 [calcium channel inhibitor activity]
GO:0019901 [protein kinase binding]
GO:0019904 [protein domain specific binding]
GO:0021762 [substantia nigra development]
GO:0030017 [sarcomere]
GO:0030234 [enzyme regulator activity]
GO:0031432 [titin binding]
GO:0031514 [motile cilium]
GO:0031954 [positive regulation of protein autophosphorylation]
GO:0031982 [vesicle]
GO:0031997 [N-terminal myristoylation domain binding]
GO:0032465 [regulation of cytokinesis]
GO:0032516 [positive regulation of phosphoprotein phosphatase activity]
GO:0032991 [protein-containing complex]
GO:0034704 [calcium channel complex]
GO:0035307 [positive regulation of protein dephosphorylation]
GO:0042995 [cell projection]
GO:0043209 [myelin sheath]
GO:0043388 [positive regulation of DNA binding]
GO:0043539 [protein serine/threonine kinase activator activity]
GO:0044325 [transmembrane transporter binding]
GO:0046872 [metal ion binding]
GO:0048306 [calcium-dependent protein binding]
GO:0050848 [regulation of calcium-mediated signaling]
GO:0051343 [positive regulation of cyclic-nucleotide phosphodiesterase activity]
GO:0051592 [response to calcium ion]
GO:0055117 [regulation of cardiac muscle contraction]
GO:0060314 [regulation of ryanodine-sensitive calcium-release channel activity]
GO:0060315 [negative regulation of ryanodine-sensitive calcium-release channel activity]
GO:0060316 [positive regulation of ryanodine-sensitive calcium-release channel activity]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:0072542 [protein phosphatase activator activity]
GO:0097225 [sperm midpiece]
GO:0097718 [disordered domain specific binding]
GO:0098901 [regulation of cardiac muscle cell action potential]
GO:0140056 [organelle localization by membrane tethering]
GO:1901020 [negative regulation of calcium ion transmembrane transporter activity]
GO:1901842 [negative regulation of high voltage-gated calcium channel activity]
GO:1901844 [regulation of cell communication by electrical coupling involved in cardiac conduction]
GO:1902494 [catalytic complex]
GO:1905913 [negative regulation of calcium ion export across plasma membrane]
GO:1990456 [mitochondrion-endoplasmic reticulum membrane tethering]
Show all
149 aa
16.8 kDa
No 0
CALM1-202
ENSP00000403491
ENST00000447653
Q96HY3
[Direct mapping] CALM1 protein; Calmodulin 2 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin 3 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin-1; Calmodulin-2; Calmodulin-3; LP7057 protein
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0046872 [metal ion binding]
Show all
113 aa
12.9 kDa
No 0
CALM1-203
ENSP00000442853
ENST00000544280
Q96HY3
[Direct mapping] CALM1 protein; Calmodulin 2 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin 3 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin-1; Calmodulin-2; Calmodulin-3; LP7057 protein
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0046872 [metal ion binding]
Show all
113 aa
12.9 kDa
No 0
CALM1-205
ENSP00000450829
ENST00000553542
Q96HY3
[Direct mapping] CALM1 protein; Calmodulin 2 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin 3 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin-1; Calmodulin-2; Calmodulin-3; LP7057 protein
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0046872 [metal ion binding]
Show all
113 aa
12.9 kDa
No 0
CALM1-214
ENSP00000451062
ENST00000557020
G3V361
[Direct mapping] Calmodulin-1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005509 [calcium ion binding]
GO:0019722 [calcium-mediated signaling]
GO:0046872 [metal ion binding]
Show all
98 aa
11.1 kDa
No 0
CALM1-216
ENSP00000499421
ENST00000659177
Q96HY3
[Direct mapping] CALM1 protein; Calmodulin 2 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin 3 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin-1; Calmodulin-2; Calmodulin-3; LP7057 protein
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0046872 [metal ion binding]
Show all
113 aa
12.9 kDa
No 0
CALM1-217
ENSP00000499498
ENST00000663135
Q96HY3
[Direct mapping] CALM1 protein; Calmodulin 2 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin 3 (Phosphorylase kinase, delta), isoform CRA_a; Calmodulin-1; Calmodulin-2; Calmodulin-3; LP7057 protein
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0046872 [metal ion binding]
Show all
113 aa
12.9 kDa
No 0

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