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MT-ND6
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  • MT-ND6
CANCER LIVER CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LIHC TCGA LIHC VALIDATION PROTEIN LIHC CPTAC
Dictionary
Liver cancer
Human cancer
Liver hepatocellular carcinoma
LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-ND6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5387.01
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5391.1
Number of samples 362
Samples
Sample Description pTPM
TCGA-WJ-A86L-01A 68 years, female, white, stage:Stage I, alive, 345 days 26064.3
TCGA-DD-A116-01A 68 years, male, asian, stage:Stage IIIA, dead, 1622 days 21482.8
TCGA-RC-A6M5-01A 20 years, female, white, stage:Stage IVA, alive, 15 days 20997.7
TCGA-DD-A3A6-01A 72 years, female, white, stage:Stage II, dead, 3258 days 19886.9
TCGA-NI-A8LF-01A 74 years, male, white, stage:Stage I, alive, 799 days 19677.7
TCGA-DD-AAEB-01A 60 years, male, asian, stage:Stage I, alive, 478 days 18775.2
TCGA-BD-A3ER-01A 62 years, male, white, stage:Stage II, alive, 1115 days 16894.1
TCGA-WQ-AB4B-01A 62 years, male, white, stage:Stage II, alive, 395 days 16214.8
TCGA-K7-A5RG-01A 66 years, male, black or african american, stage:Stage I, alive, 519 days 15976.1
TCGA-RC-A7SF-01A 66 years, male, asian, stage:Stage I, alive, 579 days 15605.5
TCGA-CC-A7IF-01A 59 years, male, asian, stage:Stage IIIA, dead, 649 days 15561.5
TCGA-BC-A10R-01A 66 years, female, white, stage:'--, dead, 308 days 15514.9
TCGA-EP-A26S-01A 70 years, male, white, stage:Stage I, alive, 608 days 15304.7
TCGA-DD-AAD6-01A 66 years, male, asian, stage:Stage IIIA, alive, 672 days 15222.8
TCGA-G3-A25U-01A 63 years, female, asian, stage:Stage I, alive, 1636 days 14975.3
TCGA-WX-AA47-01A 33 years, female, white, stage:Stage IIIA, dead, 556 days 14522.8
TCGA-RC-A6M4-01A 74 years, female, white, stage:Stage IIIA, alive, 22 days 14398.1
TCGA-DD-A115-01A 53 years, male, white, stage:Stage IIIA, dead, 2542 days 13738.3
TCGA-DD-A3A2-01A 76 years, female, white, stage:Stage I, dead, 2131 days 13204.9
TCGA-DD-A4NG-01A 77 years, male, white, stage:Stage IIIA, dead, 802 days 13172.4
TCGA-DD-AAEI-01A 72 years, male, asian, stage:Stage I, alive, 1531 days 13115.0
TCGA-ED-A4XI-01A 58 years, male, asian, stage:Stage II, alive, 819 days 13047.3
TCGA-DD-A1ED-01A 68 years, male, white, stage:Stage I, alive, 2301 days 12650.3
TCGA-G3-AAV1-01A 51 years, male, asian, stage:Stage IIIC, dead, 359 days 12460.2
TCGA-BC-A3KG-01A 68 years, female, white, stage:Stage II, alive, 680 days 12408.9
TCGA-MR-A8JO-01A 34 years, male, white, stage:Stage I, alive, 330 days 12356.7
TCGA-DD-A4NE-01A 75 years, female, white, stage:Stage IIIA, dead, 660 days 12341.9
TCGA-BC-A10Y-01A 76 years, male, white, stage:'--, dead, 711 days 12267.3
TCGA-DD-A73D-01A 68 years, female, white, stage:Stage II, alive, 693 days 12230.4
TCGA-ZP-A9D0-01A 67 years, female, black or african american, stage:'--, alive, 1091 days 12174.9
TCGA-DD-A3A5-01A 66 years, female, white, stage:Stage III, dead, 3125 days 11982.5
TCGA-4R-AA8I-01A 66 years, male, white, stage:Stage II, dead, 262 days 11925.1
TCGA-CC-A9FS-01A 55 years, male, asian, stage:Stage II, alive, 211 days 11639.3
TCGA-RC-A7SK-01A 59 years, male, asian, stage:Stage I, alive, 472 days 11520.5
TCGA-BD-A3EP-01A 75 years, female, black or african american, stage:Stage I, alive, 409 days 11452.7
TCGA-2Y-A9H6-01A 68 years, female, white, stage:Stage I, alive, 357 days 11246.2
TCGA-DD-A1EK-01A 64 years, female, white, stage:Stage IVB, dead, 558 days 11070.4
TCGA-DD-AADL-01A 58 years, male, asian, stage:Stage I, alive, 636 days 11065.7
TCGA-DD-AACX-01A 66 years, male, asian, stage:Stage II, alive, 170 days 11010.1
TCGA-DD-AADS-01A 63 years, male, asian, stage:Stage I, alive, 474 days 10932.2
TCGA-DD-A4NI-01A 67 years, male, white, stage:Stage II, alive, 816 days 10917.4
TCGA-DD-A4NL-01A 46 years, male, white, stage:Stage I, alive, 1711 days 10724.6
TCGA-G3-A3CI-01A 71 years, male, white, stage:Stage I, alive, 180 days 10688.2
TCGA-DD-AACV-01A 53 years, male, asian, stage:Stage I, alive, 1531 days 10605.0
TCGA-ED-A97K-01A 54 years, male, asian, stage:Stage IIIA, alive, 6 days 10479.6
TCGA-2Y-A9GU-01A 55 years, female, white, stage:Stage I, alive, 1939 days 10375.7
TCGA-RC-A7SB-01A 53 years, male, asian, stage:Stage II, alive, 588 days 10304.0
TCGA-BC-A3KF-01A 66 years, female, white, stage:Stage I, alive, 8 days 10165.7
TCGA-2Y-A9GW-01A 64 years, male, white, stage:Stage I, dead, 1271 days 10149.4
TCGA-LG-A9QD-01A 68 years, male, white, stage:Stage IIIA, alive, 366 days 10085.1
TCGA-UB-AA0U-01A 60 years, male, white, stage:Stage II, alive, 327 days 10003.8
TCGA-MR-A520-01A 58 years, male, white, stage:Stage I, alive, 229 days 9938.5
TCGA-DD-AAEA-01A 65 years, male, asian, stage:Stage I, alive, 575 days 9874.3
TCGA-MI-A75H-01A 77 years, male, white, stage:'--, alive, 747 days 9838.1
TCGA-G3-A25Z-01A 58 years, male, asian, stage:Stage I, alive, 655 days 9512.3
TCGA-DD-A1EA-01A 68 years, male, asian, stage:Stage II, alive, 2415 days 9396.6
TCGA-G3-A7M7-01A 65 years, male, white, stage:Stage I, alive, 361 days 9369.4
TCGA-DD-AAED-01A 51 years, male, asian, stage:Stage I, alive, 763 days 9298.8
TCGA-G3-A5SL-01A 70 years, male, white, stage:Stage II, alive, 621 days 9188.5
TCGA-CC-A8HT-01A 74 years, male, asian, stage:Stage IIIA, dead, 140 days 9186.0
TCGA-XR-A8TC-01A 43 years, female, white, stage:Stage I, alive, 1339 days 9166.0
TCGA-EP-A12J-01A 62 years, male, black or african american, stage:Stage I, alive, 570 days 9160.4
TCGA-MI-A75C-01A 64 years, male, white, stage:Stage I, alive, 291 days 9123.1
TCGA-ZP-A9D1-01A 56 years, female, white, stage:'--, alive, 21 days 9016.9
TCGA-CC-A7IL-01A 61 years, male, asian, stage:Stage IIIA, dead, 278 days 8960.7
TCGA-UB-A7MD-01A 67 years, male, black or african american, stage:Stage I, dead, 52 days 8860.3
TCGA-UB-AA0V-01A 69 years, female, white, stage:Stage I, alive, 314 days 8642.0
TCGA-DD-AAD2-01A 66 years, male, asian, stage:Stage I, alive, 658 days 8595.6
TCGA-DD-AADK-01A 68 years, female, asian, stage:Stage II, alive, 1049 days 8555.7
TCGA-2Y-A9GS-01A 58 years, male, white, stage:'--, dead, 724 days 8506.4
TCGA-DD-AAE3-01A 50 years, male, asian, stage:Stage I, alive, 566 days 8504.1
TCGA-3K-AAZ8-01A 65 years, male, black or african american, stage:Stage IIIB, alive, 396 days 8416.9
TCGA-DD-AADF-01A 64 years, female, asian, stage:Stage I, dead, 115 days 8200.1
TCGA-DD-AAD0-01A 73 years, female, asian, stage:Stage I, alive, 137 days 8157.1
TCGA-ED-A459-01A 47 years, male, asian, stage:Stage II, alive, 910 days 8142.9
TCGA-BW-A5NO-01A 50 years, male, black or african american, stage:Stage IIIA, alive, 20 days 8104.9
TCGA-2Y-A9H5-01A 59 years, female, white, stage:Stage I, dead, 555 days 8082.4
TCGA-DD-AAE9-01A 69 years, male, asian, stage:Stage I, alive, 722 days 8062.2
TCGA-DD-AADA-01A 66 years, female, asian, stage:Stage I, alive, 1233 days 8052.8
TCGA-WX-AA46-01A 61 years, male, white, stage:Stage II, alive, 756 days 8024.5
TCGA-5C-AAPD-01A 61 years, male, asian, stage:Stage II, alive, 20 days 8015.9
TCGA-LG-A6GG-01A 79 years, female, white, stage:Stage II, alive, 387 days 7967.5
TCGA-BC-A69I-01A 69 years, male, white, stage:Stage I, alive, 387 days 7889.8
TCGA-ZP-A9CY-01A 66 years, female, white, stage:'--, alive, 782 days 7818.5
TCGA-DD-A1EB-01A 72 years, female, stage:Stage I, alive, 2017 days 7808.0
TCGA-XR-A8TF-01A 74 years, male, white, stage:Stage I, dead, 693 days 7800.1
TCGA-BC-A10X-01A 52 years, female, white, stage:Stage IIIA, dead, 770 days 7748.0
TCGA-2Y-A9H4-01A 68 years, male, black or african american, stage:Stage I, alive, 1452 days 7730.8
TCGA-5R-AA1D-01A 17 years, female, white, stage:Stage IIIA, alive, 449 days 7715.6
TCGA-G3-A5SJ-01A 59 years, male, white, stage:Stage I, alive, 698 days 7696.7
TCGA-G3-A5SM-01A 58 years, male, white, stage:Stage II, alive, 520 days 7635.3
TCGA-G3-A6UC-01A 65 years, male, white, stage:Stage IIIB, alive, 671 days 7513.7
TCGA-DD-AADG-01A 70 years, male, asian, stage:Stage IIIA, alive, 1145 days 7309.7
TCGA-FV-A3R3-01A 38 years, female, white, stage:Stage I, dead, 366 days 7298.1
TCGA-DD-AAVW-01A 35 years, male, asian, stage:Stage I, alive, 2317 days 7284.5
TCGA-CC-A8HV-01A 51 years, female, asian, stage:Stage II, dead, 279 days 7134.3
TCGA-DD-AAVQ-01A 38 years, male, asian, stage:Stage I, alive, 2728 days 7082.8
TCGA-DD-AACS-01A 39 years, male, asian, stage:Stage I, alive, 1804 days 7070.8
TCGA-2Y-A9GV-01A 54 years, female, white, stage:Stage I, dead, 2532 days 7064.2
TCGA-K7-A5RF-01A 64 years, male, white, stage:Stage I, alive, 631 days 7058.2
TCGA-DD-AAW1-01A 55 years, male, asian, stage:Stage IIIA, alive, 1989 days 6986.4
TCGA-FV-A496-01A 84 years, female, white, stage:Stage I, alive, 10 days 6973.2
TCGA-HP-A5N0-01A 90 years, female, stage:'--, dead, 752 days 6915.9
TCGA-DD-A4NR-01A 85 years, female, white, stage:Stage I, dead, 9 days 6900.0
TCGA-DD-A1EC-01A 20 years, female, white, stage:Stage I, alive, 602 days 6854.3
TCGA-DD-AAVP-01A 48 years, male, asian, stage:Stage I, alive, 2752 days 6829.9
TCGA-DD-A4NJ-01A 54 years, female, white, stage:Stage II, alive, 928 days 6818.1
TCGA-2Y-A9H2-01A 64 years, female, white, stage:Stage I, alive, 1731 days 6765.4
TCGA-DD-A4NF-01A 72 years, male, white, stage:Stage I, alive, 942 days 6760.6
TCGA-BD-A2L6-01A 69 years, male, white, stage:'--, alive, 1363 days 6708.1
TCGA-DD-AACE-01A 62 years, male, asian, stage:Stage I, alive, 2184 days 6691.5
TCGA-BC-A110-01A 51 years, female, black or african american, stage:'--, dead, 2116 days 6675.4
TCGA-CC-A7IH-01A 58 years, male, asian, stage:Stage IIIA, alive, 365 days 6603.9
TCGA-2Y-A9H1-01A 58 years, male, white, stage:Stage I, dead, 1229 days 6598.1
TCGA-DD-A1EL-01A 23 years, male, black or african american, stage:Stage II, dead, 415 days 6575.1
TCGA-DD-AAE1-01A 52 years, male, asian, stage:Stage I, alive, 552 days 6542.0
TCGA-2Y-A9GZ-01A 82 years, female, white, stage:Stage II, dead, 848 days 6502.4
TCGA-DD-AAEE-01A 55 years, male, asian, stage:Stage I, alive, 810 days 6483.3
TCGA-DD-AAVR-01A 44 years, male, asian, stage:Stage I, alive, 2513 days 6302.7
TCGA-DD-AAE2-01A 51 years, male, asian, stage:Stage I, alive, 638 days 6290.7
TCGA-BC-A5W4-01A 69 years, male, white, stage:Stage IIIA, dead, 547 days 6229.1
TCGA-G3-A3CK-01A 61 years, male, asian, stage:Stage I, alive, 585 days 6218.9
TCGA-DD-AACQ-01A 50 years, male, asian, stage:Stage II, dead, 432 days 6208.1
TCGA-XR-A8TG-01A 58 years, male, white, stage:Stage I, alive, 898 days 6110.7
TCGA-ZP-A9CV-01A 59 years, male, white, stage:'--, dead, 1088 days 6109.0
TCGA-DD-A73F-01A 77 years, female, white, stage:Stage I, alive, 1085 days 6064.6
TCGA-G3-A5SK-01A 58 years, male, white, stage:Stage I, alive, 744 days 6045.9
TCGA-DD-AACF-01A 68 years, male, asian, stage:Stage I, dead, 365 days 5928.7
TCGA-DD-A4ND-01A 56 years, female, white, stage:Stage I, alive, 2746 days 5917.1
TCGA-DD-A118-01A 77 years, female, white, stage:Stage II, alive, 3437 days 5913.8
TCGA-G3-A3CH-01A 53 years, male, asian, stage:Stage IIIA, alive, 780 days 5913.5
TCGA-BC-A8YO-01A 66 years, female, white, stage:Stage IIIC, alive, 562 days 5811.7
TCGA-2Y-A9H3-01A 45 years, male, white, stage:Stage II, alive, 1516 days 5784.9
TCGA-G3-A25V-01A 68 years, male, white, stage:Stage I, alive, 860 days 5659.5
TCGA-BC-A10Q-01A 72 years, female, white, stage:'--, dead, 1135 days 5642.0
TCGA-G3-A7M8-01A 31 years, male, asian, stage:Stage I, alive, 430 days 5460.6
TCGA-DD-AAD8-01A 73 years, female, asian, stage:Stage I, alive, 1219 days 5412.6
TCGA-2Y-A9H8-01A 85 years, female, white, stage:'--, dead, 633 days 5408.5
TCGA-DD-AAE6-01A 59 years, female, asian, stage:Stage I, alive, 141 days 5401.9
TCGA-DD-A11C-01A 69 years, male, white, stage:Stage I, alive, 662 days 5397.1
TCGA-DD-AAEG-01A 59 years, female, asian, stage:Stage I, alive, 719 days 5387.0
TCGA-BC-A10Z-01A 62 years, female, white, stage:Stage I, dead, 34 days 5369.3
TCGA-2Y-A9GX-01A 68 years, male, white, stage:Stage I, alive, 2442 days 5358.2
TCGA-NI-A4U2-01A 71 years, male, white, stage:Stage IIIA, dead, 1791 days 5349.0
TCGA-2Y-A9GT-01A 51 years, male, white, stage:Stage I, dead, 1624 days 5348.3
TCGA-DD-A3A8-01A 75 years, male, white, stage:Stage II, dead, 11 days 5339.5
TCGA-DD-A73B-01A 72 years, female, white, stage:Stage I, dead, 283 days 5297.8
TCGA-CC-5259-01A 60 years, female, asian, stage:Stage IIIC, alive, 250 days 5288.6
TCGA-G3-A25Y-01A 52 years, female, asian, stage:Stage I, dead, 452 days 5234.4
TCGA-5R-AAAM-01A 65 years, female, white, stage:Stage II, dead, 46 days 5187.0
TCGA-ED-A66Y-01A 51 years, female, asian, stage:Stage IIIA, dead, 296 days 5148.9
TCGA-DD-A4NS-01A 61 years, female, white, stage:Stage I, dead, 2456 days 5105.7
TCGA-DD-AAVX-01A 38 years, male, asian, stage:Stage II, alive, 1718 days 5093.9
TCGA-DD-A4NB-01A 25 years, male, white, stage:Stage I, alive, 989 days 5029.1
TCGA-ZP-A9D4-01A 64 years, female, white, stage:'--, alive, 395 days 5011.7
TCGA-ED-A66X-01A 35 years, male, asian, stage:Stage IIIA, alive, 406 days 4998.5
TCGA-BC-A216-01A 62 years, female, white, stage:Stage IIIA, alive, 1351 days 4956.0
TCGA-QA-A7B7-01A 48 years, male, black or african american, stage:Stage II, alive, 94 days 4947.1
TCGA-DD-A11D-01A 57 years, female, white, stage:Stage I, dead, 1560 days 4913.6
TCGA-DD-A4NO-01A 65 years, male, white, stage:Stage I, alive, 2245 days 4908.2
TCGA-DD-A4NN-01A 56 years, female, white, stage:Stage I, dead, 899 days 4884.5
TCGA-WQ-A9G7-01A 71 years, female, white, stage:'--, alive, 30 days 4803.2
TCGA-DD-AAC9-01A 51 years, male, asian, stage:Stage I, alive, 347 days 4715.7
TCGA-ZS-A9CE-01A 79 years, female, white, stage:Stage II, alive, 1241 days 4707.8
TCGA-DD-A73A-01A 71 years, male, white, stage:Stage I, alive, 728 days 4650.2
TCGA-DD-AAD1-01A 51 years, female, asian, stage:Stage I, alive, 564 days 4617.7
TCGA-K7-AAU7-01A 61 years, male, white, stage:Stage II, alive, 359 days 4562.1
TCGA-G3-A5SI-01A 44 years, male, asian, stage:Stage II, dead, 768 days 4490.3
TCGA-DD-AADR-01A 58 years, male, asian, stage:Stage I, alive, 2028 days 4482.6
TCGA-DD-AADQ-01A 59 years, male, asian, stage:Stage II, alive, 436 days 4472.5
TCGA-EP-A3JL-01A 76 years, male, white, stage:Stage I, alive, 303 days 4425.6
TCGA-DD-A1EE-01A 73 years, male, white, stage:Stage IIIA, dead, 349 days 4403.3
TCGA-DD-A3A7-01A 67 years, male, stage:Stage IIIB, dead, 419 days 4391.7
TCGA-DD-A39W-01A 29 years, female, white, stage:Stage III, dead, 827 days 4383.4
TCGA-O8-A75V-01A 54 years, male, stage:Stage I, alive, 538 days 4284.9
TCGA-FV-A23B-01A 70 years, female, white, stage:Stage II, dead, 1852 days 4222.5
TCGA-DD-AACI-01A 69 years, male, asian, stage:Stage II, alive, 1618 days 4211.1
TCGA-FV-A3R2-01A 75 years, male, white, stage:Stage I, dead, 194 days 4207.8
TCGA-DD-AAW0-01A 54 years, male, asian, stage:Stage I, alive, 2015 days 4185.2
TCGA-KR-A7K0-01A 65 years, male, white, stage:Stage I, dead, 65 days 4116.9
TCGA-MI-A75G-01A 63 years, male, white, stage:Stage II, alive, 698 days 4105.4
TCGA-MI-A75E-01A 61 years, male, white, stage:Stage IIIC, alive, 507 days 4102.7
TCGA-G3-AAUZ-01A 48 years, male, stage:Stage I, alive, 480 days 4099.9
TCGA-G3-AAV2-01A 50 years, male, white, stage:Stage I, alive, 372 days 4084.5
TCGA-FV-A2QR-01A 75 years, male, white, stage:Stage I, dead, 581 days 3993.3
TCGA-DD-A73E-01A 66 years, male, white, stage:Stage I, alive, 44 days 3973.6
TCGA-CC-A5UD-01A 45 years, male, asian, stage:Stage IIIA, dead, 304 days 3939.7
TCGA-DD-AAVV-01A 56 years, male, asian, stage:Stage II, alive, 2455 days 3912.2
TCGA-FV-A3I1-01A 81 years, female, white, stage:Stage II, dead, 247 days 3886.5
TCGA-G3-A3CJ-01A 52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days 3866.5
TCGA-BC-A217-01A 75 years, female, white, stage:Stage II, dead, 1397 days 3861.7
TCGA-ZS-A9CF-01A 64 years, male, white, stage:Stage II, alive, 2412 days 3832.9
TCGA-2Y-A9H0-01A 49 years, male, white, stage:Stage IIIA, alive, 3675 days 3822.2
TCGA-2Y-A9HA-01A 70 years, male, white, stage:Stage II, dead, 36 days 3805.9
TCGA-DD-AACT-01A 69 years, female, asian, stage:Stage I, alive, 1562 days 3802.7
TCGA-WX-AA44-01A 64 years, female, white, stage:Stage I, alive, 615 days 3796.7
TCGA-DD-A1EF-01A 57 years, female, white, stage:Stage I, dead, 394 days 3754.4
TCGA-DD-AAW3-01A 69 years, male, asian, stage:Stage I, alive, 1633 days 3746.0
TCGA-CC-A3MC-01A 54 years, male, asian, stage:Stage IIIA, alive, 363 days 3745.3
TCGA-KR-A7K8-01A 57 years, male, stage:Stage I, alive, 906 days 3738.6
TCGA-DD-AADU-01A 60 years, male, asian, stage:Stage II, alive, 554 days 3736.8
TCGA-LG-A9QC-01A 48 years, male, white, stage:Stage I, alive, 425 days 3678.0
TCGA-XR-A8TE-01A 16 years, male, white, stage:Stage IIIA, alive, 925 days 3658.8
TCGA-PD-A5DF-01A 58 years, female, white, stage:Stage IIIB, dead, 639 days 3629.5
TCGA-CC-A3MA-01A 61 years, male, asian, stage:Stage IIIA, dead, 303 days 3612.7
TCGA-CC-A3MB-01A 36 years, male, asian, stage:Stage IIIA, dead, 315 days 3598.9
TCGA-EP-A2KA-01A 52 years, female, white, stage:Stage IIIA, dead, 627 days 3579.6
TCGA-2Y-A9GY-01A 64 years, female, white, stage:Stage II, dead, 757 days 3515.5
TCGA-DD-A3A4-01A 37 years, male, white, stage:Stage IIIA, dead, 612 days 3505.4
TCGA-2Y-A9HB-01A 66 years, male, stage:Stage I, alive, 260 days 3493.2
TCGA-DD-AAEK-01A 51 years, male, asian, stage:Stage II, alive, 1067 days 3460.2
TCGA-DD-A3A9-01A 64 years, female, white, stage:Stage IVB, dead, 931 days 3388.0
TCGA-CC-5258-01A 48 years, male, asian, stage:Stage II, dead, 129 days 3368.6
TCGA-CC-A5UE-01A 48 years, male, asian, stage:Stage IIIB, dead, 272 days 3330.4
TCGA-GJ-A6C0-01A 75 years, female, white, stage:Stage II, dead, 31 days 3322.8
TCGA-BC-A10T-01A 76 years, male, white, stage:'--, dead, 837 days 3319.1
TCGA-DD-AADV-01A 50 years, male, asian, stage:Stage I, alive, 574 days 3259.5
TCGA-DD-A114-01A 42 years, male, black or african american, stage:Stage II, dead, 1149 days 3254.8
TCGA-CC-5262-01A 67 years, male, asian, stage:Stage IIIC, dead, 103 days 3254.3
TCGA-DD-AADC-01A 53 years, male, asian, stage:Stage I, dead, 425 days 3243.7
TCGA-DD-AACL-01A 66 years, female, asian, stage:Stage I, dead, 107 days 3241.5
TCGA-CC-A1HT-01A 50 years, male, asian, stage:Stage IIIA, dead, 101 days 3118.2
TCGA-DD-A39X-01A 78 years, female, white, stage:Stage I, dead, 1694 days 3107.9
TCGA-CC-A8HS-01A 18 years, male, asian, stage:Stage IIIC, dead, 300 days 3103.7
TCGA-DD-A119-01A 40 years, male, asian, stage:Stage IV, dead, 223 days 3083.2
TCGA-DD-AACD-01A 48 years, male, asian, stage:Stage I, dead, 381 days 3078.9
TCGA-FV-A495-01A 51 years, female, white, stage:Stage II, alive, 1 days 3063.4
TCGA-KR-A7K2-01A 64 years, male, white, stage:Stage I, alive, 829 days 3056.6
TCGA-DD-A1EH-01A 23 years, male, white, stage:Stage III, alive, 1495 days 3009.5
TCGA-G3-A7M5-01A 76 years, male, asian, stage:Stage I, alive, 447 days 3003.4
TCGA-CC-A9FW-01A 68 years, male, asian, stage:Stage IIIA, alive, 248 days 3000.4
TCGA-DD-A4NV-01A 61 years, male, white, stage:Stage IIIA, alive, 2398 days 2977.3
TCGA-T1-A6J8-01A 68 years, male, white, stage:'--, alive, 23 days 2975.8
TCGA-ED-A7XO-01A 29 years, male, asian, stage:Stage IIIA, alive, 427 days 2966.6
TCGA-DD-AADD-01A 51 years, male, asian, stage:Stage I, alive, 1231 days 2919.3
TCGA-DD-AACC-01A 61 years, male, asian, stage:Stage I, dead, 1685 days 2916.2
TCGA-EP-A3RK-01A 73 years, male, white, stage:Stage IIIA, alive, 363 days 2910.9
TCGA-HP-A5MZ-01A 78 years, male, stage:Stage I, dead, 91 days 2887.4
TCGA-ED-A7XP-01A 53 years, female, asian, stage:Stage II, alive, 400 days 2871.3
TCGA-G3-AAV0-01A 58 years, male, asian, stage:Stage I, alive, 476 days 2840.3
TCGA-RC-A7SH-01A 42 years, male, asian, stage:Stage II, alive, 468 days 2835.4
TCGA-DD-A4NK-01A 80 years, female, white, stage:Stage IIIA, dead, 1210 days 2794.4
TCGA-DD-AADM-01A 58 years, male, asian, stage:Stage II, dead, 12 days 2766.3
TCGA-CC-A7IK-01A 59 years, male, asian, stage:Stage IIIA, dead, 262 days 2760.6
TCGA-GJ-A9DB-01A 68 years, male, white, stage:Stage I, dead, 67 days 2732.7
TCGA-CC-A8HU-01A 39 years, female, asian, stage:Stage IIIA, dead, 344 days 2731.7
TCGA-CC-A5UC-01A 63 years, male, asian, stage:Stage IIIA, dead, 347 days 2713.3
TCGA-CC-5264-01A 71 years, male, asian, stage:Stage IIIA, dead, 102 days 2705.9
TCGA-DD-A11B-01A 73 years, male, white, stage:Stage I, dead, 14 days 2705.1
TCGA-DD-AADJ-01A 70 years, female, asian, stage:Stage I, alive, 1066 days 2696.0
TCGA-DD-A3A3-01A 45 years, male, asian, stage:Stage I, dead, 535 days 2691.5
TCGA-DD-A39Z-01A 43 years, female, stage:Stage II, dead, 601 days 2691.2
TCGA-DD-AAE7-01A 72 years, male, asian, stage:Stage I, alive, 644 days 2690.5
TCGA-DD-AACA-01A 65 years, male, asian, stage:Stage I, alive, 2301 days 2690.1
TCGA-DD-A1EI-01A 46 years, male, asian, stage:Stage I, alive, 183 days 2650.8
TCGA-DD-AADI-01A 43 years, female, asian, stage:Stage I, alive, 1085 days 2638.0
TCGA-G3-A7M6-01A 60 years, female, white, stage:Stage I, alive, 632 days 2610.3
TCGA-UB-A7MC-01A 59 years, male, white, stage:Stage IIIA, alive, 500 days 2604.1
TCGA-DD-AAEH-01A 73 years, male, asian, stage:Stage I, alive, 784 days 2540.6
TCGA-2Y-A9H9-01A 70 years, male, white, stage:Stage I, alive, 697 days 2534.7
TCGA-DD-AACY-01A 61 years, male, asian, stage:Stage I, alive, 1450 days 2489.0
TCGA-5C-A9VH-01A 70 years, male, white, stage:Stage I, alive, 322 days 2478.9
TCGA-CC-A7IE-01A 57 years, male, asian, stage:Stage IIIA, dead, 217 days 2429.1
TCGA-DD-AACJ-01A 75 years, male, asian, stage:Stage II, alive, 2102 days 2424.7
TCGA-ED-A7PX-01A 48 years, female, asian, stage:Stage II, alive, 6 days 2408.8
TCGA-2Y-A9H7-01A 81 years, female, white, stage:Stage I, alive, 1168 days 2380.1
TCGA-RG-A7D4-01A 69 years, male, black or african american, stage:Stage II, alive, 1098 days 2376.1
TCGA-DD-A73C-01A 65 years, female, white, stage:Stage IIIA, alive, 701 days 2286.4
TCGA-DD-A1EG-01A 76 years, male, white, stage:Stage I, dead, 1372 days 2281.2
TCGA-GJ-A3OU-01A 59 years, male, white, stage:Stage I, alive, 879 days 2277.0
TCGA-DD-AAW2-01A 69 years, male, asian, stage:Stage I, alive, 1855 days 2258.6
TCGA-EP-A2KC-01A 62 years, male, black or african american, stage:Stage I, dead, 19 days 2247.3
TCGA-CC-A7IG-01A 47 years, male, asian, stage:Stage II, dead, 299 days 2123.5
TCGA-BC-A10U-01A 69 years, male, white, stage:'--, dead, 837 days 2111.4
TCGA-DD-A4NH-01A 65 years, female, white, stage:Stage IIIB, alive, 917 days 2101.4
TCGA-RC-A6M6-01A 75 years, male, white, stage:Stage II, alive, 9 days 2072.7
TCGA-DD-AACN-01A 32 years, male, asian, stage:Stage I, alive, 1302 days 2055.1
TCGA-CC-5261-01A 44 years, male, asian, stage:Stage II, dead, 97 days 2042.3
TCGA-G3-AAV4-01A 83 years, female, white, stage:Stage I, dead, 27 days 2026.5
TCGA-ES-A2HT-01A 54 years, male, black or african american, stage:Stage I, dead, 438 days 2020.8
TCGA-ZS-A9CD-01A 73 years, male, white, stage:Stage II, dead, 1386 days 2005.3
TCGA-UB-A7ME-01A 51 years, male, asian, stage:Stage I, alive, 486 days 1992.2
TCGA-DD-AAVZ-01A 38 years, male, asian, stage:Stage I, alive, 1900 days 1987.6
TCGA-DD-A4NP-01A 32 years, male, white, stage:Stage I, alive, 3308 days 1959.6
TCGA-XR-A8TD-01A 49 years, female, white, stage:Stage IIIB, alive, 1030 days 1956.6
TCGA-DD-AAVS-01A 56 years, male, asian, stage:Stage I, alive, 1823 days 1923.3
TCGA-G3-A25S-01A 64 years, male, white, stage:Stage I, dead, 416 days 1861.4
TCGA-G3-A25X-01A 73 years, male, asian, stage:Stage II, alive, 1779 days 1858.4
TCGA-ZS-A9CG-01A 55 years, male, white, stage:Stage II, alive, 341 days 1853.4
TCGA-G3-AAV3-01A 58 years, female, white, stage:Stage II, alive, 412 days 1852.9
TCGA-BC-A10S-01A 81 years, male, white, stage:'--, dead, 1423 days 1849.8
TCGA-DD-AAE4-01A 49 years, female, asian, stage:Stage I, alive, 608 days 1838.4
TCGA-DD-AADW-01A 48 years, male, asian, stage:Stage I, alive, 587 days 1835.7
TCGA-G3-A25T-01A 45 years, female, white, stage:Stage IIIA, alive, 1553 days 1817.2
TCGA-ED-A7PZ-01A 61 years, male, asian, stage:Stage II, alive, 6 days 1774.6
TCGA-CC-5260-01A 61 years, female, asian, stage:Stage IIIC, dead, 87 days 1765.2
TCGA-MI-A75I-01A 61 years, male, black or african american, stage:'--, alive, 630 days 1764.0
TCGA-DD-AACG-01A 52 years, male, asian, stage:Stage II, dead, 469 days 1752.1
TCGA-EP-A2KB-01A 46 years, female, white, stage:Stage I, dead, 596 days 1751.6
TCGA-ED-A627-01A 74 years, male, white, stage:Stage I, alive, 423 days 1751.0
TCGA-CC-5263-01A 35 years, male, asian, stage:Stage IIIA, dead, 129 days 1684.9
TCGA-DD-AACU-01A 59 years, male, asian, stage:Stage I, alive, 1567 days 1658.7
TCGA-UB-A7MF-01A 56 years, male, white, stage:Stage IIIA, dead, 214 days 1656.2
TCGA-G3-AAV7-01A 38 years, male, asian, stage:Stage II, alive, 361 days 1645.3
TCGA-G3-A3CG-01A 80 years, male, white, stage:Stage I, alive, 673 days 1622.8
TCGA-UB-A7MB-01A 24 years, male, white, stage:Stage II, alive, 601 days 1595.7
TCGA-DD-A73G-01A 73 years, female, white, stage:Stage I, alive, 3478 days 1588.0
TCGA-RC-A7S9-01A 47 years, female, asian, stage:Stage I, alive, 640 days 1583.6
TCGA-ZP-A9CZ-01A 72 years, male, asian, stage:'--, alive, 706 days 1562.4
TCGA-DD-AACB-01A 74 years, female, asian, stage:Stage I, alive, 2324 days 1541.6
TCGA-ZP-A9D2-01A 51 years, male, white, stage:'--, dead, 765 days 1517.0
TCGA-DD-A113-01A 55 years, female, white, stage:Stage II, alive, 2425 days 1514.6
TCGA-5C-A9VG-01A 58 years, male, white, stage:Stage II, alive, 328 days 1503.7
TCGA-ED-A82E-01A 60 years, female, asian, stage:Stage IIIA, alive, 408 days 1503.3
TCGA-DD-AADY-01A 55 years, female, asian, stage:Stage I, alive, 555 days 1457.4
TCGA-CC-A3M9-01A 45 years, male, asian, stage:Stage IIIA, dead, 300 days 1447.7
TCGA-ED-A7PY-01A 20 years, female, asian, stage:Stage II, alive, 390 days 1402.7
TCGA-DD-AADB-01A 51 years, male, asian, stage:Stage I, alive, 1242 days 1401.2
TCGA-DD-AACP-01A 64 years, male, asian, stage:Stage I, alive, 415 days 1393.2
TCGA-DD-A4NQ-01A 60 years, male, white, stage:Stage II, dead, 373 days 1375.6
TCGA-DD-AADP-01A 45 years, male, asian, stage:Stage I, alive, 458 days 1355.8
TCGA-DD-AACO-01A 40 years, male, asian, stage:Stage I, alive, 1876 days 1334.2
TCGA-DD-AA3A-01A 81 years, female, white, stage:Stage I, dead, 410 days 1331.4
TCGA-DD-AAD5-01A 54 years, male, asian, stage:Stage I, alive, 1345 days 1328.6
TCGA-DD-A4NA-01A 67 years, female, white, stage:Stage IIIC, alive, 1008 days 1314.8
TCGA-FV-A3I0-01A 76 years, female, white, stage:Stage II, alive, 848 days 1290.3
TCGA-G3-AAV5-01A 67 years, male, white, stage:Stage II, alive, 354 days 1284.8
TCGA-DD-AACK-01A 70 years, male, asian, stage:Stage I, alive, 9 days 1266.3
TCGA-KR-A7K7-01A 61 years, female, white, stage:Stage II, alive, 951 days 1218.9
TCGA-CC-A7IJ-01A 56 years, male, asian, stage:Stage II, alive, 382 days 1199.0
TCGA-ES-A2HS-01A 80 years, male, white, stage:Stage I, dead, 688 days 1195.2
TCGA-DD-AAD3-01A 43 years, male, asian, stage:Stage I, alive, 1295 days 1166.4
TCGA-ED-A8O6-01A 50 years, female, asian, stage:Stage IIIA, dead, 56 days 1162.2
TCGA-CC-A123-01A 24 years, female, asian, stage:Stage IIIA, alive, 219 days 1088.6
TCGA-CC-A7II-01A 54 years, male, asian, stage:Stage IIIA, alive, 399 days 1038.1
TCGA-ED-A5KG-01A 60 years, female, asian, stage:Stage II, alive, 854 days 1019.3
TCGA-5R-AA1C-01A 57 years, male, white, stage:Stage II, alive, 520 days 1018.2
TCGA-DD-AACW-01A 43 years, male, asian, stage:Stage I, alive, 1424 days 1003.6
TCGA-DD-AADN-01A 59 years, male, asian, stage:Stage I, alive, 898 days 995.6
TCGA-DD-A3A1-01A 65 years, male, stage:Stage IIIA, dead, 233 days 988.6
TCGA-BC-A112-01A 80 years, male, white, stage:'--, dead, 153 days 975.6
TCGA-DD-AACZ-01A 63 years, female, asian, stage:Stage I, dead, 171 days 909.5
TCGA-G3-A7M9-01A 70 years, male, white, stage:Stage IIIB, dead, 56 days 885.7
TCGA-DD-AAE0-01A 45 years, female, asian, stage:Stage IIIA, alive, 555 days 882.7
TCGA-K7-A6G5-01A 66 years, male, white, stage:Stage I, alive, 512 days 855.7
TCGA-DD-AAVY-01A 56 years, male, asian, stage:Stage IIIA, alive, 1970 days 847.9
TCGA-DD-A1EJ-01A 71 years, female, white, stage:Stage IIIC, dead, 1005 days 839.5
TCGA-DD-AACH-01A 69 years, male, asian, stage:Stage II, dead, 195 days 833.5
TCGA-ED-A8O5-01A 59 years, female, asian, stage:Stage IIIA, alive, 406 days 731.2
TCGA-DD-AAVU-01A 46 years, male, asian, stage:Stage II, alive, 2202 days 674.0
TCGA-DD-A39V-01A 77 years, male, white, stage:Stage II, dead, 643 days 661.6
TCGA-FV-A2QQ-01A 80 years, male, white, stage:Stage I, alive, 729 days 650.5
TCGA-FV-A4ZQ-01A 52 years, male, white, stage:Stage I, alive, 12 days 573.4
TCGA-BC-A10W-01A 50 years, male, asian, stage:'--, dead, 91 days 563.8
TCGA-FV-A4ZP-01A 78 years, male, white, stage:Stage IIIA, dead, 2486 days 557.3
TCGA-YA-A8S7-01A 68 years, male, white, stage:Stage IIIA, dead, 412 days 546.9
TCGA-DD-AAC8-01A 72 years, male, asian, stage:Stage I, dead, 16 days 510.5
TCGA-DD-AADO-01A 55 years, male, asian, stage:Stage I, alive, 453 days 510.3
TCGA-UB-A7MA-01A 62 years, female, white, stage:Stage II, alive, 848 days 372.1
TCGA-DD-A39Y-01A 67 years, male, asian, stage:Stage I, dead, 171 days 366.2
TCGA-G3-AAV6-01A 53 years, female, white, stage:Stage IIIA, dead, 65 days 272.5
TCGA-BC-A69H-01A 64 years, male, white, stage:Stage II, alive, 444 days 209.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

  Survival analysis data not available.
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples 330
Samples
Sample ID Sample type nRPX
471 Tumor N/A
351 Tumor N/A
472 Normal N/A
231 Tumor N/A
352 Normal N/A
473 Tumor N/A
111 Normal N/A
232 Normal N/A
353 Tumor N/A
474 Normal N/A
112 Tumor N/A
354 Normal N/A
113 Tumor N/A
355 Tumor N/A
114 Normal N/A
356 Normal N/A
477 Tumor N/A
357 Tumor N/A
478 Normal N/A
358 Normal N/A
911 Tumor N/A
912 Normal N/A
913 Tumor N/A
914 Normal N/A
915 Tumor N/A
916 Normal N/A
917 Tumor N/A
918 Normal N/A
481 Tumor N/A
361 Tumor N/A
482 Normal N/A
362 Normal N/A
483 Tumor N/A
363 Tumor N/A
484 Normal N/A
364 Normal N/A
123 Tumor N/A
365 Tumor N/A
124 Normal N/A
366 Normal N/A
487 Tumor N/A
125 Tumor N/A
367 Tumor N/A
488 Normal N/A
126 Normal N/A
368 Normal N/A
127 Tumor N/A
128 Normal N/A
921 Tumor N/A
922 Normal N/A
923 Tumor N/A
924 Normal N/A
925 Tumor N/A
926 Normal N/A
491 Tumor N/A
492 Normal N/A
493 Tumor N/A
131 Tumor N/A
494 Normal N/A
132 Normal N/A
375 Tumor N/A
376 Normal N/A
497 Tumor N/A
135 Tumor N/A
498 Normal N/A
136 Normal N/A
257 Tumor N/A
137 Tumor N/A
258 Normal N/A
138 Normal N/A
813 Tumor N/A
814 Normal N/A
815 Tumor N/A
816 Normal N/A
937 Tumor N/A
817 Tumor N/A
938 Normal N/A
818 Normal N/A
261 Tumor N/A
141 Tumor N/A
262 Normal N/A
383 Tumor N/A
142 Normal N/A
384 Normal N/A
385 Tumor N/A
386 Normal N/A
145 Tumor N/A
387 Tumor N/A
146 Normal N/A
267 Tumor N/A
388 Normal N/A
147 Tumor N/A
268 Normal N/A
148 Normal N/A
943 Tumor N/A
823 Tumor N/A
944 Normal N/A
824 Normal N/A
1022 Normal N/A
1021 Tumor N/A
391 Tumor N/A
271 Tumor N/A
392 Normal N/A
272 Normal N/A
393 Tumor N/A
394 Normal N/A
395 Tumor N/A
396 Normal N/A
277 Tumor N/A
1016 Normal N/A
278 Normal N/A
1015 Tumor N/A
1014 Normal N/A
951 Tumor N/A
1013 Tumor N/A
952 Normal N/A
953 Tumor N/A
954 Normal N/A
713 Tumor N/A
955 Tumor N/A
714 Normal N/A
956 Normal N/A
715 Tumor N/A
957 Tumor N/A
716 Normal N/A
958 Normal N/A
1032 Normal N/A
1031 Tumor N/A
161 Tumor N/A
162 Normal N/A
283 Tumor N/A
284 Normal N/A
285 Tumor N/A
286 Normal N/A
1028 Normal N/A
1027 Tumor N/A
1026 Normal N/A
1025 Tumor N/A
721 Tumor N/A
963 Tumor N/A
722 Normal N/A
964 Normal N/A
723 Tumor N/A
965 Tumor N/A
724 Normal N/A
966 Normal N/A
967 Tumor N/A
968 Normal N/A
727 Tumor N/A
728 Normal N/A
1044 Normal N/A
1043 Tumor N/A
1042 Normal N/A
1041 Tumor N/A
171 Tumor N/A
172 Normal N/A
297 Tumor N/A
298 Normal N/A
851 Tumor N/A
852 Normal N/A
975 Tumor N/A
976 Normal N/A
977 Tumor N/A
615 Tumor N/A
857 Tumor N/A
978 Normal N/A
616 Normal N/A
737 Tumor N/A
858 Normal N/A
617 Tumor N/A
738 Normal N/A
618 Normal N/A
185 Tumor N/A
186 Normal N/A
187 Tumor N/A
188 Normal N/A
981 Tumor N/A
861 Tumor N/A
982 Normal N/A
741 Tumor N/A
862 Normal N/A
983 Tumor N/A
742 Normal N/A
863 Tumor N/A
984 Normal N/A
1046 Normal N/A
743 Tumor N/A
864 Normal N/A
1045 Tumor N/A
744 Normal N/A
865 Tumor N/A
745 Tumor N/A
866 Normal N/A
746 Normal N/A
867 Tumor N/A
868 Normal N/A
627 Tumor N/A
628 Normal N/A
191 Tumor N/A
192 Normal N/A
195 Tumor N/A
196 Normal N/A
873 Tumor N/A
874 Normal N/A
513 Tumor N/A
755 Tumor N/A
514 Normal N/A
635 Tumor N/A
756 Normal N/A
877 Tumor N/A
515 Tumor N/A
636 Normal N/A
878 Normal N/A
516 Normal N/A
517 Tumor N/A
518 Normal N/A
881 Tumor N/A
882 Normal N/A
641 Tumor N/A
883 Tumor N/A
642 Normal N/A
884 Normal N/A
523 Tumor N/A
524 Normal N/A
525 Tumor N/A
526 Normal N/A
647 Tumor N/A
527 Tumor N/A
648 Normal N/A
528 Normal N/A
411 Tumor N/A
412 Normal N/A
533 Tumor N/A
413 Tumor N/A
534 Normal N/A
414 Normal N/A
535 Tumor N/A
777 Tumor N/A
415 Tumor N/A
536 Normal N/A
778 Normal N/A
416 Normal N/A
537 Tumor N/A
538 Normal N/A
661 Tumor N/A
662 Normal N/A
421 Tumor N/A
663 Tumor N/A
422 Normal N/A
664 Normal N/A
785 Tumor N/A
423 Tumor N/A
665 Tumor N/A
786 Normal N/A
424 Normal N/A
545 Tumor N/A
666 Normal N/A
425 Tumor N/A
546 Normal N/A
426 Normal N/A
427 Tumor N/A
428 Normal N/A
671 Tumor N/A
672 Normal N/A
431 Tumor N/A
311 Tumor N/A
432 Normal N/A
553 Tumor N/A
312 Normal N/A
433 Tumor N/A
554 Normal N/A
313 Tumor N/A
434 Normal N/A
314 Normal N/A
435 Tumor N/A
436 Normal N/A
557 Tumor N/A
558 Normal N/A
563 Tumor N/A
443 Tumor N/A
564 Normal N/A
685 Tumor N/A
444 Normal N/A
686 Normal N/A
445 Tumor N/A
446 Normal N/A
567 Tumor N/A
447 Tumor N/A
568 Normal N/A
327 Tumor N/A
448 Normal N/A
328 Normal N/A
571 Tumor N/A
451 Tumor N/A
572 Normal N/A
331 Tumor N/A
452 Normal N/A
573 Tumor N/A
211 Tumor N/A
332 Normal N/A
574 Normal N/A
695 Tumor N/A
212 Normal N/A
696 Normal N/A
213 Tumor N/A
455 Tumor N/A
697 Tumor N/A
214 Normal N/A
456 Normal N/A
698 Normal N/A
217 Tumor N/A
218 Normal N/A
461 Tumor N/A
341 Tumor N/A
462 Normal N/A
221 Tumor N/A
342 Normal N/A
463 Tumor N/A
222 Normal N/A
343 Tumor N/A
464 Normal N/A
223 Tumor N/A
344 Normal N/A
465 Tumor N/A
224 Normal N/A
466 Normal N/A
467 Tumor N/A
468 Normal N/A
227 Tumor N/A
228 Normal N/A
Show allShow less
LIVER CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Pending cancer tissue analysis

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