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MT-ND2
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TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55748.3 nTPM
HPA Brain:19853.2 nTPM
GTEx:55748.3 nTPM
Pig:6873.2 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19853.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 12798.8
2565 Male, age 75, midline 18809.5
2194 Female, age 79, both hemispheres 17184.9
2816 Male, age 47, midline 11797.4
2048 Male, age 55, midline 11669.2
1981 Female, age 72, midline 4533.3
Cervical spinal cord, dorsal horn
nTPM: 9216.7
2297 Male, age 75, both hemispheres 18243.7
2721 Male, age 90, both hemispheres 16281.5
1877 Male, age 55, unknown 9050.5
2069 Male, age 47, both hemispheres 4534.6
2173 Female, age 72, unknown 4088.3
2296 Male, age 66, both hemispheres 3102.0
Cervical spinal cord, ventral horn
nTPM: 19853.2
2480 Male, age 75, both hemispheres 40244.7
2820 Female, age 79, both hemispheres 30725.3
2295 Male, age 66, both hemispheres 17875.7
2068 Male, age 55, unknown 15291.4
2809 Male, age 90, both hemispheres 13275.0
2098 Female, age 72, unknown 1707.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55748.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 55748.3
Samples: 159

Max nTPM: 360496.6
Min nTPM: 9440.9
Std nTPM: 50728.3
Median nTPM: 42003.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 360496.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 289996.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 277861.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 195748.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 191191.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 169541.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 160252.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 158990.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 141162.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 135479.5
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 135455.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 134623.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 128873.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 124202.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 118069.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 110155.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 102155.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 100826.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 99620.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 90960.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 90559.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 89464.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 87144.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 86375.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 85757.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 82979.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 79950.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 78517.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 78481.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 78207.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 75711.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 75637.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 73915.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 72650.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 69778.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 69225.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 68831.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 68487.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 68274.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 67681.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 67637.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 66611.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 65438.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 64017.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 60369.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 59337.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 59229.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 58920.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 57680.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 56814.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 54675.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 54322.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 53728.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 53460.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 53121.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 52339.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 52291.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 51980.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 49421.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 48851.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 48340.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 48221.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 48206.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 48034.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 47921.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 47063.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 46791.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 46648.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 46429.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 46109.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 46086.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 45392.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 44878.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 44733.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 44202.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 43198.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 43121.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 42980.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 42901.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 42003.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 41781.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 41582.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 40297.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 40287.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 39466.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 38998.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 38485.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 36696.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 36250.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 36087.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 35336.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 35227.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 34692.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 34224.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 34006.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 33324.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 32613.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 32390.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 32299.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 32124.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 31644.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 30909.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 30725.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 30306.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 30151.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 30057.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 29994.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 29640.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 29612.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 28689.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 28645.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 28199.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 28018.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 28016.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 27625.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 27415.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 26287.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 25426.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 25052.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 24269.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 24089.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 23969.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 23861.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 23793.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 23538.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 23005.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 22994.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 22586.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 22446.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 22237.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 22121.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 21650.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 21441.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 21371.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 21333.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 21144.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 20858.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 20854.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 20369.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 20319.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 19646.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 18968.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 18805.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 18647.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 18106.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 17182.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 16741.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 16415.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 16116.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 15622.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 15578.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 15128.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 14917.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 14472.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 13670.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 12913.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 12886.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 11075.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 9440.9
Show allShow less

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6873.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 6412.0
Samples: 4

Max nTPM: 8373.0
Min nTPM: 4349.0
Sample A Female 8373.0
Sample B Female 7161.8
Sample C Male 4349.0
Sample D Male 5764.1
Ventral spinal cord
nTPM: 6873.3
Samples: 4

Max nTPM: 11632.4
Min nTPM: 2846.4
Sample A Female 11632.4
Sample B Female 2846.4
Sample C Male 7146.9
Sample D Male 5867.3

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