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MT-ND1
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  • MT-ND1
TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in glomeruli: Not detected
Cells in tubules: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:46651.7 nTPM
HPA:14877.3 nTPM
GTEx:46651.7 nTPM

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA066847Antibody CAB033779
Cells in glomeruli Not detectedNot detected
Cells in tubules MediumHigh





KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14877.3
overview
Female, age 58
Kidney sample 55
nTPM: 7018.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 15163.2
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 14178.7
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 15972.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 30761.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 9260.8
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 19372.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 12012.4
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 10155.6
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46651.7
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 46651.7
Samples: 85

Max nTPM: 119431.4
Min nTPM: 2143.5
Std nTPM: 29410.2
Median nTPM: 45913.9
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 119431.4
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 107548.2
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 106728.6
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 103083.7
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 100005.9
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 97559.8
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 92784.0
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 91401.6
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 89542.1
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 87694.5
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 86669.2
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 85259.1
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 83395.2
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 80874.3
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 80016.4
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 78486.5
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 76675.2
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 75204.2
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 72374.6
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 69717.3
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 68146.2
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 67704.8
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 64621.6
GTEX-O5YV-1226-SM-EV795 60-69 years, female 62734.9
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 59687.6
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 56541.6
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 55569.2
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 55123.1
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 54576.8
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 54368.9
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 54028.9
GTEX-14C39-2126-SM-664OH 40-49 years, male 53522.2
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 52893.3
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 52478.1
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 50873.5
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 50040.8
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 49691.5
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 49554.6
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 47766.6
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 46686.6
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 46516.7
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 46360.7
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 45913.9
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 45803.1
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 44644.4
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 43512.4
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 42999.4
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 41424.9
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 39791.5
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 38963.9
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 36449.1
GTEX-13112-2126-SM-5GCO4 50-59 years, male 35397.6
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 34302.0
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 34251.3
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 32925.8
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 28151.8
GTEX-12696-0926-SM-5FQTV 60-69 years, male 27494.4
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 27318.9
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 25912.0
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 25096.3
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 24551.2
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 23569.0
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 22825.3
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 20833.0
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 19686.2
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 19137.2
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 17114.2
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 15986.8
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 15838.2
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 14359.5
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 14115.8
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 14110.5
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 12947.4
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 12930.9
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 10524.7
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 10482.2
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 10444.2
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 10316.8
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 9376.6
GTEX-RN64-1626-SM-48FD7 50-59 years, male 8954.9
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 8349.9
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 6637.1
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 3599.5
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 2269.1
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 2143.5
Show allShow less
Kidney - Medulla
Average nTPM: 27741.7
Samples: 4

Max nTPM: 36590.1
Min nTPM: 14458.4
Std nTPM: 8777.5
Median nTPM: 29959.2
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 36590.1
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 34628.4
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 25290.0
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 14458.4

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