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PRMT6
HPA
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  • PRMT6
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PRMT6
Synonyms FLJ10559, HRMT1L6
Gene descriptioni

Full gene name according to HGNC.

Protein arginine methyltransferase 6
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p13.3
Chromosome location (bp) 107056674 - 107067636
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
Ensembl ENSG00000198890 (version 109)
Entrez gene 55170
HGNC HGNC:18241
UniProt Q96LA8 (UniProt - Evidence at protein level)
neXtProt NX_Q96LA8
GeneCards PRMT6
Antibodypedia PRMT6 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Arginine methyltransferase that can catalyze the formation of both omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA), with a strong preference for the formation of aDMA 1, 2, 3, 4, 5. Preferentially methylates arginyl residues present in a glycine and arginine-rich domain and displays preference for monomethylated substrates 6, 7, 8, 9. Specifically mediates the asymmetric dimethylation of histone H3 'Arg-2' to form H3R2me2a 10, 11, 12. H3R2me2a represents a specific tag for epigenetic transcriptional repression and is mutually exclusive with methylation on histone H3 'Lys-4' (H3K4me2 and H3K4me3) 13, 14. Acts as a transcriptional repressor of various genes such as HOXA2, THBS1 and TP53 15. Repression of TP53 blocks cellular senescence (By similarity). Also methylates histone H2A and H4 'Arg-3' (H2AR3me and H4R3me, respectively). Acts as a regulator of DNA base excision during DNA repair by mediating the methylation of DNA polymerase beta (POLB), leading to the stimulation of its polymerase activity by enhancing DNA binding and processivity 16. Methylates HMGA1 17, 18. Regulates alternative splicing events. Acts as a transcriptional coactivator of a number of steroid hormone receptors including ESR1, ESR2, PGR and NR3C1. Promotes fasting-induced transcriptional activation of the gluconeogenic program through methylation of the CRTC2 transcription coactivator (By similarity). May play a role in innate immunity against HIV-1 in case of infection by methylating and impairing the function of various HIV-1 proteins such as Tat, Rev and Nucleocapsid protein p7 (NC) 19. Methylates GPS2, protecting GPS2 from ubiquitination and degradation (By similarity). Methylates SIRT7, inhibiting SIRT7 histone deacetylase activity and promoting mitochondria biogenesis 20.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chromatin regulator, Methyltransferase, Repressor, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA repair, Host-virus interaction, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

S-adenosyl-L-methionine
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene belongs to the arginine N-methyltransferase family, which catalyze the sequential transfer of methyl group from S-adenosyl-L-methionine to the side chain nitrogens of arginine residues within proteins, to form methylated arginine derivatives and S-adenosyl-L-homocysteine. This protein can catalyze both, the formation of omega-N monomethylarginine and asymmetrical dimethylarginine, with a strong preference for the latter. It specifically mediates the asymmetric dimethylation of Arg2 of histone H3, and the methylated form represents a specific tag for epigenetic transcriptional repression. This protein also forms a complex with, and methylates DNA polymerase beta, resulting in stimulation of polymerase activity by enhancing DNA binding and processivity. [provided by RefSeq, Sep 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PRMT6-201
ENSP00000359095
ENST00000370078
Q96LA8
[Direct mapping] Protein arginine N-methyltransferase 6
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0006281 [DNA repair]
GO:0006284 [base-excision repair]
GO:0006325 [chromatin organization]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008469 [histone-arginine N-methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0010821 [regulation of mitochondrion organization]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0019919 [peptidyl-arginine methylation, to asymmetrical-dimethyl arginine]
GO:0032259 [methylation]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035242 [protein-arginine omega-N asymmetric methyltransferase activity]
GO:0035246 [peptidyl-arginine N-methylation]
GO:0036211 [protein modification process]
GO:0042054 [histone methyltransferase activity]
GO:0042393 [histone binding]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0070611 [histone methyltransferase activity (H3-R2 specific)]
GO:0070612 [histone methyltransferase activity (H2A-R3 specific)]
GO:0090398 [cellular senescence]
GO:1901726 [negative regulation of histone deacetylase activity]
GO:1901796 [regulation of signal transduction by p53 class mediator]
Show all
375 aa
41.9 kDa
No 0

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