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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:36.4 nTPM
HPA Brain:68.0 nTPM
GTEx:36.4 nTPM
FANTOM5:83.0 Scaled Tags Per Million
Pig:51.5 nTPM
Mouse:321.7 nTPM
Allen mouse:27.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000161
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 43.6
1781 Male, age 74, unknown 46.8
2846 Female, age 79, unknown 46.2
1857 Female, age 85, left hemisphere 44.7
2290 Female, age 72, unknown 44.7
1854 Male, age 80, left hemisphere 43.0
2481 Female, age 94, left hemisphere 41.5
2288 Male, age 75, left hemisphere 41.0
2289 Male, age 61, right hemisphere 40.6
Globus pallidus, externus
nTPM: 27.1
2646 Male, age 61, right hemisphere 32.7
2395 Male, age 75, both hemispheres 30.9
2772 Female, age 79, unknown 29.4
2567 Female, age 72, unknown 22.7
1996 Male, age 80, right hemisphere 19.6
Globus pallidus, internus
nTPM: 25.1
2483 Female, age 94, right hemisphere 38.6
2287 Male, age 75, right hemisphere 28.3
1818 Male, age 74, unknown 26.9
2566 Female, age 72, unknown 25.1
2778 Female, age 91, both hemispheres 21.9
2037 Male, age 80, right hemisphere 20.6
2111 Female, age 85, right hemisphere 14.1
Nucleus accumbens
nTPM: 47.4
1856 Female, age 91, right hemisphere 62.5
2824 Male, age 61, right hemisphere 57.8
1783 Male, age 74, unknown 48.6
2391 Female, age 94, left hemisphere 47.2
2698 Female, age 72, unknown 46.3
2286 Male, age 75, left hemisphere 41.9
1806 Female, age 85, left hemisphere 39.1
2732 Male, age 80, right hemisphere 35.4
Nucleus basalis of Meynert
nTPM: 39.0
2484 Female, age 94, left hemisphere 44.0
2821 Male, age 75, both hemispheres 42.6
2393 Male, age 80, right hemisphere 40.0
2569 Male, age 61, both hemispheres 29.6
Nucleus of the diagonal band
nTPM: 65.2
2195 Female, age 85, both hemispheres 71.8
2775 Male, age 80, right hemisphere 70.1
1812 Female, age 91, both hemispheres 67.3
2029 Male, age 61, right hemisphere 59.0
1979 Male, age 74, unknown 57.6
Putamen
nTPM: 41.5
1838 Male, age 80, right hemisphere 48.8
1937 Female, age 91, right hemisphere 48.4
2466 Female, age 79, unknown 44.0
1829 Male, age 74, unknown 41.4
2482 Female, age 94, left hemisphere 38.9
2647 Male, age 75, left hemisphere 37.9
2489 Female, age 72, unknown 30.7
Septal nuclei
nTPM: 59.0
1960 Male, age 74, unknown 74.5
2031 Female, age 72, unknown 67.9
2009 Female, age 91, both hemispheres 64.2
2629 Female, age 94, right hemisphere 61.3
2059 Female, age 85, both hemispheres 54.9
2199 Male, age 80, right hemisphere 45.5
2394 Male, age 61, left hemisphere 44.6
Stria terminalis, bed nucleus
nTPM: 68.0
1974 Female, age 91, both hemispheres 72.1
2486 Female, age 94, both hemispheres 66.2
2201 Male, age 74, unknown 65.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.7
Samples: 246

Max nTPM: 65.1
Min nTPM: 7.3
Std nTPM: 10.6
Median nTPM: 23.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 61.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 54.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 52.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 48.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 47.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 47.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 46.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 45.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 42.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 41.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 40.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 40.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 40.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 39.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 39.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 39.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 39.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 38.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 38.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 38.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 38.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 38.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 37.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 37.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 37.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 37.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 37.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 36.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 36.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 36.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 36.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 36.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 36.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 36.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 36.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 35.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 35.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 35.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 35.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 35.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 34.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 34.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 34.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 34.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 34.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 34.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 33.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 33.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 33.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 33.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 33.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 32.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 32.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 32.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 32.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 32.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 32.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 31.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 31.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 31.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 30.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 30.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 30.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 30.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 29.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 29.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 29.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 28.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 28.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 28.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 28.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 28.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 28.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 28.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 28.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 27.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 27.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 27.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 27.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 27.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 27.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 27.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 27.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 27.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 27.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 27.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 26.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 26.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 26.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 26.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 26.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 25.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 25.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 25.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 25.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 25.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 25.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 25.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 24.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 24.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 24.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 24.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 24.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 24.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 23.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 23.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 23.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 23.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 23.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 23.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 23.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 22.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 22.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 22.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 22.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 22.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 22.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 22.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 22.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 22.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 22.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 22.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 22.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 21.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 21.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 21.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 21.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 21.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 21.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 21.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 21.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 20.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 20.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 20.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 20.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 19.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 19.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 19.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 19.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 19.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 19.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 19.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 19.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 19.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 18.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 18.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 18.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 18.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 18.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 18.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 18.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 18.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 18.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 17.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 17.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 17.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 17.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 17.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 17.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 17.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 17.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 17.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 16.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 16.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 16.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 16.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 15.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 15.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 15.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 15.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 15.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 15.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 15.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 15.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 15.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 15.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 15.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 15.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 15.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 14.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 14.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 14.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 14.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 14.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 14.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 14.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 14.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 14.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 14.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 13.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 13.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 13.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 13.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 12.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 12.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 12.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 12.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 11.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 11.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 11.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 9.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 9.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 7.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 7.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 36.4
Samples: 246

Max nTPM: 90.9
Min nTPM: 7.1
Std nTPM: 15.4
Median nTPM: 36.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 90.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 82.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 73.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 69.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 67.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 67.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 66.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 65.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 63.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 63.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 62.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 60.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 60.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 60.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 60.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 60.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 59.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 59.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 58.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 58.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 57.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 57.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 57.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 57.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 57.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 56.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 56.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 55.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 55.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 55.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 54.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 53.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 53.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 53.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 53.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 52.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 51.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 51.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 51.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 50.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 50.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 50.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 49.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 49.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 49.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 49.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 49.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 49.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 48.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 48.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 48.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 48.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 48.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 48.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 47.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 47.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 47.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 46.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 46.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 46.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 46.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 46.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 45.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 45.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 45.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 45.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 45.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 45.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 44.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 44.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 44.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 44.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 43.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 43.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 43.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 42.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 42.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 42.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 42.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 42.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 42.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 42.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 41.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 41.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 41.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 41.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 41.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 41.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 41.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 41.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 40.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 40.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 40.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 40.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 40.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 40.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 39.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 39.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 39.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 38.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 38.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 38.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 38.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 38.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 37.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 37.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 37.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 37.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 37.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 37.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 37.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 37.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 37.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 36.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 36.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 36.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 36.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 35.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 35.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 35.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 34.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 34.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 33.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 33.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 33.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 32.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 32.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 32.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 32.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 32.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 32.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 31.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 31.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 31.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 31.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 31.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 30.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 30.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 30.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 30.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 30.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 30.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 30.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 29.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 29.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 29.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 28.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 28.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 28.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 28.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 28.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 28.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 28.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 27.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 27.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 26.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 26.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 26.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 25.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 25.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 25.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 25.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 25.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 24.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 24.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 24.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 24.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 24.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 24.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 23.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 23.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 23.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 23.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 22.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 22.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 22.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 21.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 21.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 21.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 21.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 20.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 20.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 20.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 20.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 19.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 19.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 18.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 18.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 18.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 18.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 18.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 18.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 18.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 17.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 17.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 17.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 17.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 17.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 17.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 16.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 16.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 16.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 16.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 16.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 15.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 15.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 15.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 15.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 15.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 15.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 15.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 15.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 14.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 14.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 14.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 14.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 13.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 13.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 12.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 11.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 11.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 10.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 7.1
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Brain - Putamen (basal ganglia)
Average nTPM: 21.6
Samples: 205

Max nTPM: 52.5
Min nTPM: 5.7
Std nTPM: 9.5
Median nTPM: 19.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 49.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 42.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 41.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 41.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 39.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 38.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 37.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 37.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 37.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 36.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 35.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 35.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 35.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 35.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 35.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 34.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 34.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 34.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 33.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 33.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 33.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 32.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 32.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 32.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 32.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 31.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 31.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 31.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 31.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 30.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 30.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 30.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 30.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 30.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 29.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 29.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 29.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 28.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 28.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 28.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 28.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 27.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 27.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 27.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 27.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 26.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 26.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 26.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 26.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 26.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 26.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 26.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 25.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 25.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 25.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 25.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 25.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 25.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 24.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 24.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 24.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 23.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 23.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 23.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 23.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 23.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 23.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 22.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 22.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 22.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 22.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 22.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 22.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 21.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 21.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 21.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 21.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 21.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 21.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 21.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 21.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 21.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 20.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 20.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 20.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 19.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 19.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 19.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 19.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 19.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 19.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 19.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 19.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 19.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 19.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 18.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 18.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 18.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 18.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 18.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 18.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 18.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 18.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 18.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 18.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 17.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 17.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 17.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 17.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 17.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 17.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 17.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 17.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 17.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 17.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 16.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 16.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 16.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 16.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 16.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 16.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 16.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 16.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 15.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 15.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 15.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 14.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 14.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 14.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 14.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 14.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 14.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 14.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 14.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 14.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 13.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 13.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 13.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 13.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 13.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 13.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 13.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 13.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 12.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 12.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 12.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 12.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 12.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 12.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 11.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 11.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 11.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 10.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 10.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 10.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 10.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 10.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 10.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 10.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 8.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 7.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 59.8
FF:10164-103B2 76 years, female 59.8
Nucleus accumbens
Scaled Tags Per Million: 72.0
FF:10037-101F1 23-56 years, mixed 72.0
Putamen
Scaled Tags Per Million: 83.0
FF:10176-103C5 60 years, female 83.0
Globus pallidus
Scaled Tags Per Million: 14.3
FF:10175-103C4 60 years, female 18.8
FF:10161-103A8 76 years, female 9.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.5
Pig sample Sample description nTPM
Caudate
nTPM: 35.6
Samples: 4

Max nTPM: 37.4
Min nTPM: 31.4
Sample A Female 37.4
Sample B Female 37.2
Sample C Male 36.4
Sample D Male 31.4
Putamen
nTPM: 31.3
Samples: 4

Max nTPM: 42.3
Min nTPM: 24.5
Sample A Female 24.5
Sample B Female 29.3
Sample C Male 42.3
Sample D Male 29.1
Septum
nTPM: 51.5
Samples: 4

Max nTPM: 80.1
Min nTPM: 30.8
Sample A Female 53.0
Sample B Female 42.1
Sample C Male 80.1
Sample D Male 30.8
Ventral pallidum
nTPM: 37.7
Samples: 4

Max nTPM: 45.4
Min nTPM: 29.6
Sample A Female 44.5
Sample B Female 29.6
Sample C Male 45.4
Sample D Male 31.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

321.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 176.9
Samples: 4

Max nTPM: 186.3
Min nTPM: 173.3
Sample A Male 186.3
Sample B Male 173.7
Sample C Female 174.2
Sample D Female 173.3
Septum
nTPM: 321.7
Samples: 4

Max nTPM: 356.3
Min nTPM: 287.5
Sample A Male 356.3
Sample B Male 304.9
Sample C Female 287.5
Sample D Female 338.2
Ventral forebrain
nTPM: 226.7
Samples: 4

Max nTPM: 284.3
Min nTPM: 195.2
Sample A Male 204.1
Sample B Male 284.3
Sample C Female 195.2
Sample D Female 223.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

27.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 26.5
67765726 Antisense, RP_040916_01_F11, Mouse strain C57BL/6J (56 days, male) 28.8
70743888 Antisense, RP_050725_01_H12, Mouse strain C57BL/6J (56 days, male) 24.2
Pallidum
Expression energy: 27.8
67765726 Antisense, RP_040916_01_F11, Mouse strain C57BL/6J (56 days, male) 31.5
70743888 Antisense, RP_050725_01_H12, Mouse strain C57BL/6J (56 days, male) 24.0

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