We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SOWAHA
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SOWAHA
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:154.3 nTPM
HPA Brain:200.8 nTPM
GTEx:154.3 nTPM
FANTOM5:203.9 Scaled Tags Per Million
Pig:80.2 nTPM
Mouse:99.7 nTPM
Allen mouse:6.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA064621
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 197.2
2289 Male, age 61, right hemisphere 263.9
2290 Female, age 72, unknown 241.9
1857 Female, age 85, left hemisphere 217.1
2288 Male, age 75, left hemisphere 213.8
2846 Female, age 79, unknown 203.7
1854 Male, age 80, left hemisphere 179.2
1781 Male, age 74, unknown 133.0
2481 Female, age 94, left hemisphere 124.8
Globus pallidus, externus
nTPM: 37.8
2646 Male, age 61, right hemisphere 76.8
2395 Male, age 75, both hemispheres 36.7
2567 Female, age 72, unknown 31.5
2772 Female, age 79, unknown 25.1
1996 Male, age 80, right hemisphere 18.9
Globus pallidus, internus
nTPM: 30.2
2483 Female, age 94, right hemisphere 86.8
2566 Female, age 72, unknown 25.4
2287 Male, age 75, right hemisphere 23.9
2778 Female, age 91, both hemispheres 22.5
2111 Female, age 85, right hemisphere 22.2
2037 Male, age 80, right hemisphere 15.6
1818 Male, age 74, unknown 14.9
Nucleus accumbens
nTPM: 171.9
2824 Male, age 61, right hemisphere 258.6
1783 Male, age 74, unknown 227.1
1806 Female, age 85, left hemisphere 223.3
2286 Male, age 75, left hemisphere 190.7
1856 Female, age 91, right hemisphere 167.5
2698 Female, age 72, unknown 134.3
2732 Male, age 80, right hemisphere 92.8
2391 Female, age 94, left hemisphere 80.6
Nucleus basalis of Meynert
nTPM: 165.3
2484 Female, age 94, left hemisphere 227.3
2393 Male, age 80, right hemisphere 169.8
2569 Male, age 61, both hemispheres 138.6
2821 Male, age 75, both hemispheres 125.6
Nucleus of the diagonal band
nTPM: 71.5
2029 Male, age 61, right hemisphere 82.1
2195 Female, age 85, both hemispheres 77.7
1812 Female, age 91, both hemispheres 73.3
1979 Male, age 74, unknown 63.7
2775 Male, age 80, right hemisphere 60.9
Putamen
nTPM: 200.8
2647 Male, age 75, left hemisphere 259.2
2489 Female, age 72, unknown 229.7
2466 Female, age 79, unknown 219.4
1838 Male, age 80, right hemisphere 210.6
1829 Male, age 74, unknown 193.4
1937 Female, age 91, right hemisphere 158.6
2482 Female, age 94, left hemisphere 135.0
Septal nuclei
nTPM: 62.8
1960 Male, age 74, unknown 102.9
2059 Female, age 85, both hemispheres 89.2
2031 Female, age 72, unknown 68.0
2009 Female, age 91, both hemispheres 55.0
2394 Male, age 61, left hemisphere 54.6
2629 Female, age 94, right hemisphere 45.1
2199 Male, age 80, right hemisphere 24.6
Stria terminalis, bed nucleus
nTPM: 44.3
2486 Female, age 94, both hemispheres 74.7
1974 Female, age 91, both hemispheres 35.4
2201 Male, age 74, unknown 22.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 104.6
Samples: 246

Max nTPM: 325.5
Min nTPM: 3.0
Std nTPM: 58.0
Median nTPM: 94.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 325.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 268.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 248.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 240.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 235.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 231.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 227.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 219.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 219.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 219.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 218.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 217.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 217.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 211.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 204.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 201.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 197.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 194.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 194.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 194.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 191.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 190.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 188.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 183.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 182.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 181.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 181.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 179.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 178.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 178.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 176.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 170.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 170.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 169.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 168.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 165.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 165.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 165.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 164.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 163.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 163.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 162.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 161.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 161.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 160.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 160.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 159.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 158.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 158.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 156.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 155.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 155.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 155.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 151.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 150.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 149.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 147.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 146.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 144.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 144.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 144.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 141.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 140.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 139.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 139.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 137.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 137.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 135.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 134.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 134.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 133.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 133.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 132.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 131.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 131.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 129.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 129.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 129.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 127.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 127.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 126.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 124.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 123.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 122.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 122.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 121.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 120.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 120.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 120.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 119.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 119.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 118.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 118.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 118.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 116.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 115.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 113.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 113.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 112.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 112.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 112.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 110.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 109.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 107.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 105.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 104.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 104.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 103.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 103.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 102.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 102.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 101.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 100.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 100.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 100.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 95.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 94.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 94.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 92.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 92.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 91.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 91.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 91.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 90.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 90.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 90.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 90.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 87.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 87.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 86.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 84.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 83.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 82.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 81.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 80.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 80.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 80.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 80.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 79.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 79.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 77.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 76.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 75.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 71.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 71.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 71.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 70.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 69.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 69.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 68.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 68.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 67.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 67.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 65.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 65.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 64.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 64.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 63.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 63.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 62.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 61.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 60.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 59.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 58.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 57.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 57.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 56.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 55.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 54.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 50.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 49.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 49.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 47.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 47.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 45.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 45.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 43.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 42.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 42.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 41.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 40.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 40.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 38.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 38.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 37.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 37.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 37.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 36.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 35.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 32.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 32.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 30.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 29.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 29.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 28.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 27.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 25.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 23.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 23.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 22.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 22.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 20.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 18.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 16.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 154.3
Samples: 246

Max nTPM: 359.1
Min nTPM: 5.1
Std nTPM: 76.7
Median nTPM: 161.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 359.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 351.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 349.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 320.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 319.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 308.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 307.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 299.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 298.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 292.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 286.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 284.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 279.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 276.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 273.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 273.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 266.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 263.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 263.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 262.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 261.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 261.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 258.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 256.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 252.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 250.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 246.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 246.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 240.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 238.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 237.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 235.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 235.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 228.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 228.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 228.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 227.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 226.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 224.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 224.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 223.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 222.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 222.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 218.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 218.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 217.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 217.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 216.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 216.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 216.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 215.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 214.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 214.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 214.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 214.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 213.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 211.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 211.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 211.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 210.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 210.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 209.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 207.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 207.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 203.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 202.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 201.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 201.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 200.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 200.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 199.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 199.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 199.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 198.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 198.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 194.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 194.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 193.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 192.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 192.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 191.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 191.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 190.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 189.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 189.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 187.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 187.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 187.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 186.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 185.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 185.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 185.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 184.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 182.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 182.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 182.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 182.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 182.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 180.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 179.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 179.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 179.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 177.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 177.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 176.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 176.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 175.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 174.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 174.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 172.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 170.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 170.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 169.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 168.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 167.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 167.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 167.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 165.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 164.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 163.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 163.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 162.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 161.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 160.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 159.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 158.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 158.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 157.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 156.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 156.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 156.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 155.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 153.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 152.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 151.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 151.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 150.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 149.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 149.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 148.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 146.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 143.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 141.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 141.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 140.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 135.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 135.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 134.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 134.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 134.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 133.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 132.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 131.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 130.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 127.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 126.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 125.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 122.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 121.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 120.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 120.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 120.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 119.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 119.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 118.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 113.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 112.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 112.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 111.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 107.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 107.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 106.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 105.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 105.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 105.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 104.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 103.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 102.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 99.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 99.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 95.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 95.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 94.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 94.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 94.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 93.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 92.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 92.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 92.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 89.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 88.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 88.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 88.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 87.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 87.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 87.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 85.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 80.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 80.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 79.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 78.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 75.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 72.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 72.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 70.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 69.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 67.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 66.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 64.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 63.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 61.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 61.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 61.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 60.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 59.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 58.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 53.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 50.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 48.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 46.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 43.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 43.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 42.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 41.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 40.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 38.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 37.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 35.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 33.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 33.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 33.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 20.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 19.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 17.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 17.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 15.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 10.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 10.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 10.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 7.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 5.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 106.3
Samples: 205

Max nTPM: 282.6
Min nTPM: 12.3
Std nTPM: 63.4
Median nTPM: 94.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 282.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 267.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 263.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 256.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 252.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 248.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 240.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 230.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 227.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 220.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 217.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 209.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 208.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 206.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 206.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 205.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 203.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 199.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 198.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 197.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 196.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 195.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 193.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 192.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 191.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 190.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 190.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 189.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 185.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 185.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 184.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 183.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 181.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 181.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 179.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 179.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 176.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 175.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 173.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 172.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 170.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 170.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 168.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 157.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 156.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 155.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 155.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 154.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 153.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 152.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 151.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 150.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 149.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 149.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 147.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 147.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 147.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 145.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 145.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 143.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 142.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 141.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 140.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 137.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 137.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 136.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 133.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 131.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 130.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 130.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 128.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 127.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 127.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 127.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 126.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 123.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 120.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 118.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 118.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 117.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 116.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 116.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 112.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 109.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 109.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 108.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 107.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 105.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 105.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 103.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 103.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 102.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 102.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 102.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 102.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 101.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 101.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 100.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 100.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 99.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 99.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 96.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 94.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 94.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 94.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 93.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 93.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 93.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 92.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 92.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 89.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 89.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 88.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 88.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 88.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 87.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 86.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 83.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 83.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 83.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 83.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 77.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 76.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 75.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 75.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 74.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 73.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 72.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 72.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 70.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 69.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 69.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 67.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 67.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 67.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 66.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 66.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 65.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 64.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 63.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 61.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 61.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 60.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 59.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 57.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 54.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 54.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 54.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 53.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 53.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 52.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 52.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 51.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 51.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 51.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 51.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 50.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 47.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 47.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 47.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 46.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 44.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 42.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 42.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 41.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 41.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 40.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 40.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 40.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 38.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 37.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 35.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 35.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 34.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 32.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 26.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 26.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 25.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 24.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 24.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 23.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 23.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 22.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 21.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 21.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 21.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 20.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 18.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 17.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 16.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 15.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 15.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 13.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 12.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

203.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 168.2
FF:10164-103B2 76 years, female 168.2
Nucleus accumbens
Scaled Tags Per Million: 79.3
FF:10037-101F1 23-56 years, mixed 79.3
Putamen
Scaled Tags Per Million: 203.9
FF:10176-103C5 60 years, female 203.9
Globus pallidus
Scaled Tags Per Million: 35.9
FF:10175-103C4 60 years, female 37.6
FF:10161-103A8 76 years, female 34.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.2
Pig sample Sample description nTPM
Caudate
nTPM: 80.3
Samples: 4

Max nTPM: 98.2
Min nTPM: 64.8
Sample A Female 64.8
Sample B Female 81.2
Sample C Male 98.2
Sample D Male 76.8
Putamen
nTPM: 63.1
Samples: 4

Max nTPM: 93.6
Min nTPM: 25.3
Sample A Female 25.3
Sample B Female 66.0
Sample C Male 93.6
Sample D Male 67.6
Septum
nTPM: 43.2
Samples: 4

Max nTPM: 77.0
Min nTPM: 6.2
Sample A Female 77.0
Sample B Female 63.7
Sample C Male 6.2
Sample D Male 25.8
Ventral pallidum
nTPM: 59.7
Samples: 4

Max nTPM: 88.0
Min nTPM: 19.4
Sample A Female 88.0
Sample B Female 68.5
Sample C Male 19.4
Sample D Male 62.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 99.7
Samples: 4

Max nTPM: 105.8
Min nTPM: 92.7
Sample A Male 99.7
Sample B Male 100.6
Sample C Female 92.7
Sample D Female 105.8
Septum
nTPM: 45.2
Samples: 4

Max nTPM: 52.6
Min nTPM: 33.7
Sample A Male 33.7
Sample B Male 52.6
Sample C Female 45.2
Sample D Female 49.2
Ventral forebrain
nTPM: 61.4
Samples: 4

Max nTPM: 70.0
Min nTPM: 56.3
Sample A Male 61.2
Sample B Male 56.3
Sample C Female 70.0
Sample D Female 58.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.6
69449020 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 6.6
71250306 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 5.7
Pallidum
Expression energy: 4.9
69449020 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 4.9
71250306 Antisense, RP_050419_03_B03, Mouse strain C57BL/6J (56 days, male) 1.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org