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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
16.5
nTPM
HPA Brain:
60.6
nTPM
GTEx:
16.5
nTPM
FANTOM5:
94.6
Scaled Tags Per Million
Mouse:
52.3
nTPM
Allen mouse:
17.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
60.6
Sample id
Sample description
nTPM
Amygdala nTPM: 42.2
2814
Male, age 76, right hemisphere
52.2
2695
Female, age 67, right hemisphere
44.1
2514
Male, age 75, right hemisphere
39.9
2517
Female, age 94, left hemisphere
38.2
1987
Female, age 91, left hemisphere
36.7
Basal amygdala nTPM: 46.0
2827
Female, age 67, right hemisphere
69.0
2110
Male, age 80, left hemisphere
47.0
2685
Female, age 94, left hemisphere
44.3
1955
Male, age 76, both hemispheres
42.5
2609
Male, age 75, right hemisphere
39.1
2243
Female, age 91, right hemisphere
34.1
Central amygdala nTPM: 47.1
2826
Female, age 94, left hemisphere
62.3
1905
Male, age 76, both hemispheres
45.2
2515
Male, age 75, right hemisphere
43.7
2239
Male, age 80, left hemisphere
43.5
2701
Female, age 91, right hemisphere
40.9
Corticomedial amygdala nTPM: 35.2
2535
Female, age 67, right hemisphere
50.9
2428
Male, age 75, right hemisphere
40.2
2429
Female, age 94, left hemisphere
39.7
2240
Male, age 76, both hemispheres
30.5
2829
Male, age 80, left hemisphere
28.0
2242
Female, age 91, right hemisphere
22.2
Lateral amygdala nTPM: 60.6
2830
Female, age 67, right hemisphere
86.9
2534
Female, age 94, left hemisphere
67.7
2256
Male, age 80, left hemisphere
63.7
2516
Male, age 75, right hemisphere
52.6
2255
Female, age 91, right hemisphere
47.1
1883
Male, age 76, both hemispheres
45.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 16.5
Samples: 152
Max nTPM: 41.7
Min nTPM: 4.8
Std nTPM: 6.7
Median nTPM: 15.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
41.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
38.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
37.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
37.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
36.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
34.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
33.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
31.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
30.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
28.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
27.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
26.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
26.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
25.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
25.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
25.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
24.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
24.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
24.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
23.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
23.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
22.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
22.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
22.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
21.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
21.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
20.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
20.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
20.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
19.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
19.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
19.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
19.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
19.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
19.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
19.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
18.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
18.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
18.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
18.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
18.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
18.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
18.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
17.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
17.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
17.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
17.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
17.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
17.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
17.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
17.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
17.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
17.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
17.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
17.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
17.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
17.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
17.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
16.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
16.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
16.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
16.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
16.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
16.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
16.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
16.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
16.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
16.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
15.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
15.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
15.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
15.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
15.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
15.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
15.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
15.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
15.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
15.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
15.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
14.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
14.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
14.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
14.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
14.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
14.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
14.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
14.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
14.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
14.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
14.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
14.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
14.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
14.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
13.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
13.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
13.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
13.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
13.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
13.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
13.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
12.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
12.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
12.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
12.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
12.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
12.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
12.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
12.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
12.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
12.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
12.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
12.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
12.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
12.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
11.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
11.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
11.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
11.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
11.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
11.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
11.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
11.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
11.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
11.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
11.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
11.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
10.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
10.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
10.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
10.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
10.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
10.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
9.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
9.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
9.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
9.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
9.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
9.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
9.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
8.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
8.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
8.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
8.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
7.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
7.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
7.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
7.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
5.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
4.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 52.3
Samples: 4
Max nTPM: 79.4
Min nTPM: 34.5
Sample A
Male
34.5
Sample B
Male
46.1
Sample C
Female
79.4
Sample D
Female
49.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
