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PCMTD2
HPA
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  • PCMTD2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PCMTD2
Synonyms C20orf36, FLJ10883
Gene descriptioni

Full gene name according to HGNC.

Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q13.33
Chromosome location (bp) 64255695 - 64304820
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000203880 (version 109)
Entrez gene 55251
HGNC HGNC:15882
UniProt Q9NV79 (UniProt - Evidence at protein level)
neXtProt NX_Q9NV79
GeneCards PCMTD2
Antibodypedia PCMTD2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May act as a substrate recognition component of an ECS (Elongin BC-CUL5-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May bind to the methyltransferase cofactor S-adenosylmethionine (AdoMet) via the N-terminal AdoMet binding motif, but probably does not display methyltransferase activity.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable protein-L-isoaspartate (D-aspartate) O-methyltransferase activity. Predicted to be involved in protein methylation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PCMTD2-203
ENSP00000307854
ENST00000308824
Q9NV79
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006479 [protein methylation]
GO:0036211 [protein modification process]
Show all
361 aa
41.1 kDa
No 0
PCMTD2-204
ENSP00000358773
ENST00000369758
Q9NV79
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006479 [protein methylation]
GO:0036211 [protein modification process]
Show all
334 aa
38.1 kDa
No 0
PCMTD2-207
ENSP00000477398
ENST00000609372
V9GZ41
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0006479 [protein methylation]
GO:0036211 [protein modification process]
Show all
211 aa
24.5 kDa
No 0
PCMTD2-208
ENSP00000477252
ENST00000609764
V9GYZ7
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0006479 [protein methylation]
GO:0036211 [protein modification process]
Show all
135 aa
15.1 kDa
No 0
PCMTD2-209
ENSP00000476726
ENST00000609818
V9GYG6
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0006807 [nitrogen compound metabolic process]
GO:0036211 [protein modification process]
GO:0043170 [macromolecule metabolic process]
GO:0044238 [primary metabolic process]
Show all
183 aa
20.8 kDa
No 0
PCMTD2-210
ENSP00000477110
ENST00000610074
V9GYZ7
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0006479 [protein methylation]
GO:0036211 [protein modification process]
Show all
135 aa
15.1 kDa
No 0
PCMTD2-211
ENSP00000476878
ENST00000610196
V9GYL1
[Direct mapping] Protein-L-isoaspartate O-methyltransferase domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004719 [protein-L-isoaspartate (D-aspartate) O-methyltransferase activity]
GO:0006479 [protein methylation]
GO:0036211 [protein modification process]
Show all
94 aa
10.5 kDa
No 0

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