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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:379.6 nTPM
HPA:379.6 nTPM
GTEx:217.6 nTPM
FANTOM5:149.9 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045727
Cholangiocytes Not detected
Hepatocytes Medium



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

379.6
N/A
Female, age 60
Liver sample 21
nTPM: 268.3
overview
Male, age 54
Liver sample 23
nTPM: 221.3
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 304.5
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 499.7
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 517.9
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 374
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 354
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 411.9
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 372
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 472.4
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.6
GTEx sample id Sample description nTPM
Liver
Average nTPM: 217.6
Samples: 226

Max nTPM: 517.4
Min nTPM: 72.4
Std nTPM: 60.4
Median nTPM: 211.0
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 517.4
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 357.2
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 353.8
GTEX-QESD-2026-SM-447BI 20-29 years, male 348.1
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 345.6
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 343.3
GTEX-R53T-0326-SM-48FEC 50-59 years, female 342.2
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 336.7
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 333.7
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 330.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 321.9
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 317.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 316.2
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 314.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 313.9
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 309.6
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 306.6
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 302.9
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 301.3
GTEX-14JG1-1626-SM-664NH 40-49 years, male 299.3
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 297.6
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 296.2
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 293.8
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 291.9
GTEX-17HHE-0126-SM-79398 50-59 years, male 287.7
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 287.7
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 287.3
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 286.6
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 284.9
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 283.8
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 283.5
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 282.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 282.3
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 281.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 280.0
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 277.7
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 276.0
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 274.3
GTEX-17F96-1226-SM-79OK2 70-79 years, male 272.7
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 272.5
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 272.3
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 272.3
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 272.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 271.3
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 270.6
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 269.8
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 267.7
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 264.7
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 264.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 264.2
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 263.7
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 263.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 262.9
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 262.9
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 261.5
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 260.8
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 259.2
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 257.0
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 255.6
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 254.9
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 254.1
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 252.5
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 251.5
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 249.4
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 247.6
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 246.5
GTEX-REY6-1226-SM-48FDR 60-69 years, male 246.5
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 244.7
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 243.4
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 242.4
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 241.8
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 241.7
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 240.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 239.7
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 238.0
GTEX-S32W-1926-SM-4AD63 50-59 years, female 236.9
GTEX-1B933-1226-SM-731DW 50-59 years, female 236.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 235.8
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 235.8
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 235.3
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 234.3
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 233.7
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 232.4
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 232.3
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 231.8
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 230.9
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 229.5
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 229.3
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 227.5
GTEX-YECK-1926-SM-4W21H 60-69 years, male 227.3
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 226.9
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 226.9
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 225.5
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 225.2
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 224.4
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 223.0
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 222.9
GTEX-14E7W-1526-SM-6871X 70-79 years, male 222.2
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 221.5
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 221.5
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 221.2
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 219.7
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 217.3
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 216.9
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 216.6
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 216.4
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 215.8
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 215.6
GTEX-11ZUS-2526-SM-59872 30-39 years, male 215.1
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 215.0
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 214.1
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 212.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 211.1
GTEX-18A66-2026-SM-7189C 60-69 years, male 210.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 207.4
GTEX-O5YV-0726-SM-EV798 60-69 years, female 207.3
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 207.0
GTEX-144GL-1426-SM-79OMA 50-59 years, male 206.7
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 206.7
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 206.6
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 206.4
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 206.0
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 205.7
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 205.6
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 205.2
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 205.2
GTEX-14PHX-0526-SM-664NW 50-59 years, male 205.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 204.9
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 204.7
GTEX-X261-1726-SM-4PQYT 50-59 years, male 203.6
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 203.0
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 202.3
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 201.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 200.7
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 200.5
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 199.9
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 199.4
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 197.9
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 197.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 197.6
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 196.2
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 196.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 195.3
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 194.1
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 193.9
GTEX-RN64-1826-SM-48FDV 50-59 years, male 192.9
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 192.7
GTEX-P78B-1326-SM-3P611 40-49 years, female 192.5
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 192.3
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 191.7
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 189.2
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 188.0
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 187.9
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 187.5
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 186.0
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 184.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 184.0
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 183.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 182.2
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 182.0
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 180.8
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 180.1
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 179.2
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 177.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 176.4
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 176.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 175.3
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 174.2
GTEX-Q734-0326-SM-48U15 40-49 years, female 173.9
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 173.5
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 172.8
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 172.5
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 172.3
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 171.6
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 171.4
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 171.1
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 170.4
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 169.8
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 169.7
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 169.1
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 168.1
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 167.6
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 167.0
GTEX-1B932-1426-SM-793AN 40-49 years, female 166.8
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 165.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 165.0
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 163.6
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 163.0
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 162.8
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 161.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 161.4
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 160.7
GTEX-12696-0826-SM-5EGGE 60-69 years, male 158.8
GTEX-18465-1626-SM-7LG6N 50-59 years, male 158.7
GTEX-13113-1326-SM-5GCOI 60-69 years, female 157.9
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 157.7
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 156.0
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 155.1
GTEX-S33H-1626-SM-4AD68 30-39 years, male 152.0
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 150.9
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 150.1
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 149.8
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 147.4
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 146.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 145.4
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 144.8
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 143.6
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 140.5
GTEX-14PJO-1726-SM-68719 60-69 years, male 139.5
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 138.8
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 137.5
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 133.6
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 133.0
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 128.6
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 127.7
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 125.2
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 123.8
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 121.3
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 120.0
GTEX-14XAO-0226-SM-68728 60-69 years, female 117.8
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 114.5
GTEX-11GSP-0626-SM-5986T 60-69 years, female 109.0
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 107.6
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 77.9
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 77.6
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 72.4
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

149.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 149.9
FF:10018-101C9 64,69,70 years, mixed 149.9

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