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RACK1
HPA
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  • SUMMARY

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  • RACK1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RACK1
Synonyms Gnb2-rs1, GNB2L1, H12.3
Gene descriptioni

Full gene name according to HGNC.

Receptor for activated C kinase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Ribosomal proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband q35.3
Chromosome location (bp) 181236897 - 181248096
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

18
Ensembl ENSG00000204628 (version 109)
Entrez gene 10399
HGNC HGNC:4399
UniProt P63244 (UniProt - Evidence at protein level)
neXtProt NX_P63244
GeneCards RACK1
Antibodypedia RACK1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Scaffolding protein involved in the recruitment, assembly and/or regulation of a variety of signaling molecules. Interacts with a wide variety of proteins and plays a role in many cellular processes. Component of the 40S ribosomal subunit involved in translational repression 1. Involved in the initiation of the ribosome quality control (RQC), a pathway that takes place when a ribosome has stalled during translation, by promoting ubiquitination of a subset of 40S ribosomal subunits 2. Binds to and stabilizes activated protein kinase C (PKC), increasing PKC-mediated phosphorylation. May recruit activated PKC to the ribosome, leading to phosphorylation of EIF6. Inhibits the activity of SRC kinases including SRC, LCK and YES1. Inhibits cell growth by prolonging the G0/G1 phase of the cell cycle. Enhances phosphorylation of BMAL1 by PRKCA and inhibits transcriptional activity of the BMAL1-CLOCK heterodimer. Facilitates ligand-independent nuclear translocation of AR following PKC activation, represses AR transactivation activity and is required for phosphorylation of AR by SRC. Modulates IGF1R-dependent integrin signaling and promotes cell spreading and contact with the extracellular matrix. Involved in PKC-dependent translocation of ADAM12 to the cell membrane. Promotes the ubiquitination and proteasome-mediated degradation of proteins such as CLEC1B and HIF1A. Required for VANGL2 membrane localization, inhibits Wnt signaling, and regulates cellular polarization and oriented cell division during gastrulation. Required for PTK2/FAK1 phosphorylation and dephosphorylation. Regulates internalization of the muscarinic receptor CHRM2. Promotes apoptosis by increasing oligomerization of BAX and disrupting the interaction of BAX with the anti-apoptotic factor BCL2L. Inhibits TRPM6 channel activity. Regulates cell surface expression of some GPCRs such as TBXA2R. Plays a role in regulation of FLT1-mediated cell migration. Involved in the transport of ABCB4 from the Golgi to the apical bile canalicular membrane 3. Promotes migration of breast carcinoma cells by binding to and activating RHOA 4. Acts as an adapter for the dephosphorylation and inactivation of AKT1 by promoting recruitment of PP2A phosphatase to AKT1 (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein, Ribonucleoprotein, Ribosomal protein
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Apoptosis, Biological rhythms, Cell cycle, Gastrulation, Growth regulation, Host-virus interaction, Translation regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables several functions, including cyclin binding activity; enzyme binding activity; and protein domain specific binding activity. Involved in several processes, including positive regulation of hydrolase activity; regulation of cellular protein metabolic process; and regulation of signal transduction. Located in several cellular components, including midbody; perinuclear region of cytoplasm; and phagocytic cup. Part of IRE1-RACK1-PP2A complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RACK1-201
ENSP00000366013
ENST00000376817
J3KPE3
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
273 aa
30.1 kDa
No 0
RACK1-203
ENSP00000422029
ENST00000502844
D6R9Z1
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
236 aa
26.3 kDa
No 0
RACK1-205
ENSP00000426960
ENST00000502905
H0YAF8
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
198 aa
21.9 kDa
No 0
RACK1-206
ENSP00000424237
ENST00000503081
D6RBD0
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
160 aa
18 kDa
No 0
RACK1-209
ENSP00000427677
ENST00000504128
H0YAM7
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
247 aa
27.3 kDa
No 0
RACK1-211
ENSP00000426046
ENST00000504726
D6RHJ5
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
86 aa
9.5 kDa
No 0
RACK1-214
ENSP00000421416
ENST00000507000
D6RFX4
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
194 aa
21.4 kDa
No 0
RACK1-217
ENSP00000422316
ENST00000507756
H0Y8W2
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
274 aa
30.2 kDa
No 0
RACK1-221
ENSP00000424654
ENST00000509148
H0Y9P0
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
83 aa
8.7 kDa
No 0
RACK1-222
ENSP00000421838
ENST00000509535
H0Y8R5
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
138 aa
15.1 kDa
No 0
RACK1-223
ENSP00000423569
ENST00000510199
D6R9L0
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
300 aa
32.6 kDa
No 0
RACK1-225
ENSP00000426101
ENST00000511566
D6RHH4
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
233 aa
25.9 kDa
No 0
RACK1-226
ENSP00000422768
ENST00000511900
D6RAC2
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
269 aa
29.8 kDa
No 0
RACK1-227
ENSP00000426909
ENST00000512805
P63244
[Direct mapping] Receptor of activated protein C kinase 1 Receptor of activated protein C kinase 1, N-terminally processed
Show all
E9KL35
[Target identity:100%; Query identity:100%] Epididymis tissue sperm binding protein Li 3a
Show all
Transporters
   Accessory Factors Involved in Transport
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001891 [phagocytic cup]
GO:0001934 [positive regulation of protein phosphorylation]
GO:0002181 [cytoplasmic translation]
GO:0003723 [RNA binding]
GO:0005080 [protein kinase C binding]
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005886 [plasma membrane]
GO:0006412 [translation]
GO:0006417 [regulation of translation]
GO:0006915 [apoptotic process]
GO:0006919 [activation of cysteine-type endopeptidase activity involved in apoptotic process]
GO:0007049 [cell cycle]
GO:0007369 [gastrulation]
GO:0008200 [ion channel inhibitor activity]
GO:0008656 [cysteine-type endopeptidase activator activity involved in apoptotic process]
GO:0010629 [negative regulation of gene expression]
GO:0015935 [small ribosomal subunit]
GO:0016020 [membrane]
GO:0016567 [protein ubiquitination]
GO:0017148 [negative regulation of translation]
GO:0019899 [enzyme binding]
GO:0019903 [protein phosphatase binding]
GO:0022627 [cytosolic small ribosomal subunit]
GO:0030178 [negative regulation of Wnt signaling pathway]
GO:0030292 [protein tyrosine kinase inhibitor activity]
GO:0030308 [negative regulation of cell growth]
GO:0030332 [cyclin binding]
GO:0030335 [positive regulation of cell migration]
GO:0030425 [dendrite]
GO:0030496 [midbody]
GO:0030971 [receptor tyrosine kinase binding]
GO:0031334 [positive regulation of protein-containing complex assembly]
GO:0032091 [negative regulation of protein binding]
GO:0032436 [positive regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0032880 [regulation of protein localization]
GO:0033137 [negative regulation of peptidyl-serine phosphorylation]
GO:0035591 [signaling adaptor activity]
GO:0042169 [SH2 domain binding]
GO:0042803 [protein homodimerization activity]
GO:0042995 [cell projection]
GO:0042998 [positive regulation of Golgi to plasma membrane protein transport]
GO:0043005 [neuron projection]
GO:0043022 [ribosome binding]
GO:0043025 [neuronal cell body]
GO:0043065 [positive regulation of apoptotic process]
GO:0043204 [perikaryon]
GO:0043473 [pigmentation]
GO:0043547 [positive regulation of GTPase activity]
GO:0044297 [cell body]
GO:0045182 [translation regulator activity]
GO:0045296 [cadherin binding]
GO:0045879 [negative regulation of smoothened signaling pathway]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048511 [rhythmic process]
GO:0050765 [negative regulation of phagocytosis]
GO:0051302 [regulation of cell division]
GO:0051343 [positive regulation of cyclic-nucleotide phosphodiesterase activity]
GO:0051434 [BH3 domain binding]
GO:0051726 [regulation of cell cycle]
GO:0051898 [negative regulation of protein kinase B signaling]
GO:0051901 [positive regulation of mitochondrial depolarization]
GO:0060090 [molecular adaptor activity]
GO:0061099 [negative regulation of protein tyrosine kinase activity]
GO:0070062 [extracellular exosome]
GO:0071333 [cellular response to glucose stimulus]
GO:0071363 [cellular response to growth factor stimulus]
GO:0072344 [rescue of stalled ribosome]
GO:1900102 [negative regulation of endoplasmic reticulum unfolded protein response]
GO:1903208 [negative regulation of hydrogen peroxide-induced neuron death]
GO:1990630 [IRE1-RACK1-PP2A complex]
GO:1990904 [ribonucleoprotein complex]
GO:2000114 [regulation of establishment of cell polarity]
GO:2000543 [positive regulation of gastrulation]
GO:2001244 [positive regulation of intrinsic apoptotic signaling pathway]
Show all
317 aa
35.1 kDa
No 0
RACK1-228
ENSP00000425008
ENST00000512968
D6REE5
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
321 aa
35 kDa
No 0
RACK1-229
ENSP00000421356
ENST00000513027
D6RFZ9
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
197 aa
21.8 kDa
No 0
RACK1-233
ENSP00000426708
ENST00000514455
D6RF23
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
101 aa
11.2 kDa
No 0
RACK1-235
ENSP00000486170
ENST00000626067
E9PD14
[Direct mapping] Receptor of-activated protein C kinase 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005840 [ribosome]
GO:0006417 [regulation of translation]
GO:0007369 [gastrulation]
GO:0015935 [small ribosomal subunit]
GO:0043022 [ribosome binding]
GO:0045182 [translation regulator activity]
Show all
153 aa
17 kDa
No 0

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