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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:159.7 nTPM
HPA Brain:16.6 nTPM
GTEx:159.7 nTPM
FANTOM5:520.8 Scaled Tags Per Million
Pig:244.5 nTPM
Mouse:247.5 nTPM
Allen mouse:6.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021873
Glial cells Medium
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.2
1854 Male, age 80, left hemisphere 8.8
1857 Female, age 85, left hemisphere 6.1
2288 Male, age 75, left hemisphere 5.8
2846 Female, age 79, unknown 3.8
2481 Female, age 94, left hemisphere 2.8
2289 Male, age 61, right hemisphere 2.1
2290 Female, age 72, unknown 2.1
1781 Male, age 74, unknown 2.0
Globus pallidus, externus
nTPM: 8.7
2646 Male, age 61, right hemisphere 13.6
2395 Male, age 75, both hemispheres 12.3
2772 Female, age 79, unknown 12.1
2567 Female, age 72, unknown 3.1
1996 Male, age 80, right hemisphere 2.5
Globus pallidus, internus
nTPM: 16.6
2778 Female, age 91, both hemispheres 30.9
2111 Female, age 85, right hemisphere 26.3
2037 Male, age 80, right hemisphere 22.7
1818 Male, age 74, unknown 17.0
2287 Male, age 75, right hemisphere 13.3
2566 Female, age 72, unknown 3.6
2483 Female, age 94, right hemisphere 2.8
Nucleus accumbens
nTPM: 5.9
2732 Male, age 80, right hemisphere 11.6
1856 Female, age 91, right hemisphere 8.5
2391 Female, age 94, left hemisphere 7.4
2698 Female, age 72, unknown 5.3
2824 Male, age 61, right hemisphere 4.6
2286 Male, age 75, left hemisphere 4.4
1783 Male, age 74, unknown 4.1
1806 Female, age 85, left hemisphere 1.6
Nucleus basalis of Meynert
nTPM: 6.0
2569 Male, age 61, both hemispheres 7.7
2821 Male, age 75, both hemispheres 7.0
2393 Male, age 80, right hemisphere 6.5
2484 Female, age 94, left hemisphere 2.8
Nucleus of the diagonal band
nTPM: 1.7
1812 Female, age 91, both hemispheres 3.8
2029 Male, age 61, right hemisphere 2.1
1979 Male, age 74, unknown 1.3
2775 Male, age 80, right hemisphere 0.7
2195 Female, age 85, both hemispheres 0.4
Putamen
nTPM: 4.2
1829 Male, age 74, unknown 7.7
1937 Female, age 91, right hemisphere 5.2
2647 Male, age 75, left hemisphere 5.0
2489 Female, age 72, unknown 4.0
2466 Female, age 79, unknown 3.5
2482 Female, age 94, left hemisphere 3.3
1838 Male, age 80, right hemisphere 0.7
Septal nuclei
nTPM: 4.9
2394 Male, age 61, left hemisphere 18.2
2199 Male, age 80, right hemisphere 9.2
2629 Female, age 94, right hemisphere 3.8
2031 Female, age 72, unknown 1.5
2009 Female, age 91, both hemispheres 1.1
1960 Male, age 74, unknown 0.4
2059 Female, age 85, both hemispheres 0.4
Stria terminalis, bed nucleus
nTPM: 4.2
2486 Female, age 94, both hemispheres 5.3
1974 Female, age 91, both hemispheres 4.5
2201 Male, age 74, unknown 2.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 105.1
Samples: 246

Max nTPM: 376.7
Min nTPM: 18.2
Std nTPM: 62.2
Median nTPM: 92.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 376.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 345.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 326.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 316.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 304.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 302.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 292.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 264.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 239.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 236.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 233.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 233.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 220.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 217.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 212.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 210.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 205.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 202.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 202.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 199.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 196.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 196.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 191.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 184.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 184.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 183.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 180.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 177.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 176.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 173.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 172.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 171.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 167.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 164.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 160.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 157.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 157.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 156.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 156.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 156.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 153.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 153.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 148.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 145.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 143.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 142.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 139.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 139.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 138.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 138.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 138.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 138.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 138.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 138.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 137.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 134.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 134.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 134.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 133.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 133.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 132.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 131.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 131.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 131.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 130.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 129.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 129.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 129.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 128.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 127.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 126.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 124.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 123.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 123.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 120.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 120.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 119.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 119.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 116.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 116.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 114.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 114.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 114.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 113.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 113.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 113.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 112.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 112.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 111.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 111.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 110.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 110.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 110.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 109.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 108.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 108.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 106.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 106.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 105.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 104.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 104.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 104.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 104.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 103.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 101.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 100.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 100.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 99.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 99.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 98.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 97.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 96.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 95.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 93.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 92.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 92.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 91.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 91.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 91.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 90.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 90.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 88.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 85.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 83.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 82.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 82.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 82.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 81.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 80.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 79.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 79.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 78.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 77.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 77.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 76.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 75.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 74.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 74.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 74.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 73.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 69.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 69.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 69.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 68.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 68.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 68.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 67.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 66.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 65.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 65.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 64.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 64.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 62.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 62.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 61.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 60.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 60.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 59.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 59.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 58.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 58.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 58.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 58.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 58.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 57.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 57.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 56.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 56.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 56.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 56.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 55.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 54.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 54.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 52.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 51.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 51.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 50.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 50.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 49.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 46.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 46.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 45.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 44.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 43.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 43.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 42.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 41.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 41.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 41.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 40.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 38.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 37.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 36.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 35.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 33.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 32.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 30.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 28.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 25.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 24.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 23.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 20.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 18.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 70.2
Samples: 246

Max nTPM: 835.6
Min nTPM: 9.1
Std nTPM: 79.0
Median nTPM: 50.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 835.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 489.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 343.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 328.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 318.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 291.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 278.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 276.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 255.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 240.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 236.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 192.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 177.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 163.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 161.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 159.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 153.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 146.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 145.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 144.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 144.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 140.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 138.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 138.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 127.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 125.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 125.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 124.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 121.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 120.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 120.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 119.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 112.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 108.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 107.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 107.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 107.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 106.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 106.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 103.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 97.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 97.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 97.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 95.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 95.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 95.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 92.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 90.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 89.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 88.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 88.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 86.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 84.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 84.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 83.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 83.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 83.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 83.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 81.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 81.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 80.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 80.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 78.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 78.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 77.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 76.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 75.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 75.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 74.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 71.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 71.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 70.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 70.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 69.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 68.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 68.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 68.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 68.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 68.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 67.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 67.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 67.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 66.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 66.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 65.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 62.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 62.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 61.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 59.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 59.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 59.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 57.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 57.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 56.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 56.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 56.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 55.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 55.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 55.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 55.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 54.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 54.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 54.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 54.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 54.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 53.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 53.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 53.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 52.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 52.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 51.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 51.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 50.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 50.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 50.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 49.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 48.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 47.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 47.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 46.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 45.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 45.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 45.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 44.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 44.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 44.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 44.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 43.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 42.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 42.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 42.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 41.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 41.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 41.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 41.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 41.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 41.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 41.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 39.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 38.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 37.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 37.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 36.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 36.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 35.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 35.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 35.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 35.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 35.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 34.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 34.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 34.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 34.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 34.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 33.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 33.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 33.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 33.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 33.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 33.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 32.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 32.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 31.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 31.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 31.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 30.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 30.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 30.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 30.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 30.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 29.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 29.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 29.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 29.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 28.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 28.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 28.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 28.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 28.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 28.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 27.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 27.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 26.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 26.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 26.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 25.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 25.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 25.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 25.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 24.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 24.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 24.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 24.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 23.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 23.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 22.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 22.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 22.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 22.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 22.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 22.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 21.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 20.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 20.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 20.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 17.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 17.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 17.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 17.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 17.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 17.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 17.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 16.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 16.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 15.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 15.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 15.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 15.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 14.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 14.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 13.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 11.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 11.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9.1
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Brain - Putamen (basal ganglia)
Average nTPM: 159.7
Samples: 205

Max nTPM: 912.2
Min nTPM: 27.9
Std nTPM: 90.0
Median nTPM: 150.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 912.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 423.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 398.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 362.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 340.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 339.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 324.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 321.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 296.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 293.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 292.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 275.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 268.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 264.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 263.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 259.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 259.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 259.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 256.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 254.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 253.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 252.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 251.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 247.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 245.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 244.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 241.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 234.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 232.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 232.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 231.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 230.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 229.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 229.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 228.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 227.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 227.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 224.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 222.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 220.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 219.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 218.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 218.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 217.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 215.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 214.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 214.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 208.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 207.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 203.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 201.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 201.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 200.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 199.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 197.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 197.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 196.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 196.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 195.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 195.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 195.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 185.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 185.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 185.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 185.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 185.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 185.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 184.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 184.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 184.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 182.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 182.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 182.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 181.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 179.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 177.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 176.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 174.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 172.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 171.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 171.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 169.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 169.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 168.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 167.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 167.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 166.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 164.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 164.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 163.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 161.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 160.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 160.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 158.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 158.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 158.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 156.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 156.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 155.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 154.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 152.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 152.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 150.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 147.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 146.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 141.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 141.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 138.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 138.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 137.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 137.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 137.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 135.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 134.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 132.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 130.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 130.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 130.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 129.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 129.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 129.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 128.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 128.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 128.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 126.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 125.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 123.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 122.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 120.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 120.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 120.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 119.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 119.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 117.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 117.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 116.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 116.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 114.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 113.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 113.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 112.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 112.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 111.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 110.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 110.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 110.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 110.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 107.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 106.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 105.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 105.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 104.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 101.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 97.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 97.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 94.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 93.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 93.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 93.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 92.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 90.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 90.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 86.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 84.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 83.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 83.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 83.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 82.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 82.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 82.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 81.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 81.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 79.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 79.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 79.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 77.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 77.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 76.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 74.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 73.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 73.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 72.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 72.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 71.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 70.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 70.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 68.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 66.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 66.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 65.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 62.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 61.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 58.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 58.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 55.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 54.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 54.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 35.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 34.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 29.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 27.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

520.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 114.1
FF:10164-103B2 76 years, female 114.1
Nucleus accumbens
Scaled Tags Per Million: 276.3
FF:10037-101F1 23-56 years, mixed 276.3
Putamen
Scaled Tags Per Million: 100.2
FF:10176-103C5 60 years, female 100.2
Globus pallidus
Scaled Tags Per Million: 520.8
FF:10175-103C4 60 years, female 522.6
FF:10161-103A8 76 years, female 518.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.5
Pig sample Sample description nTPM
Caudate
nTPM: 71.9
Samples: 4

Max nTPM: 76.1
Min nTPM: 66.5
Sample A Female 74.1
Sample B Female 66.5
Sample C Male 71.0
Sample D Male 76.1
Putamen
nTPM: 244.5
Samples: 4

Max nTPM: 410.1
Min nTPM: 122.2
Sample A Female 410.1
Sample B Female 122.2
Sample C Male 150.0
Sample D Male 295.5
Septum
nTPM: 142.8
Samples: 4

Max nTPM: 192.5
Min nTPM: 109.7
Sample A Female 138.4
Sample B Female 109.7
Sample C Male 130.4
Sample D Male 192.5
Ventral pallidum
nTPM: 218.7
Samples: 4

Max nTPM: 338.3
Min nTPM: 72.6
Sample A Female 72.6
Sample B Female 172.4
Sample C Male 291.3
Sample D Male 338.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 247.5
Samples: 4

Max nTPM: 282.3
Min nTPM: 215.2
Sample A Male 242.9
Sample B Male 215.2
Sample C Female 282.3
Sample D Female 249.7
Septum
nTPM: 239.1
Samples: 4

Max nTPM: 325.4
Min nTPM: 123.5
Sample A Male 123.5
Sample B Male 191.3
Sample C Female 316.3
Sample D Female 325.4
Ventral forebrain
nTPM: 127.8
Samples: 4

Max nTPM: 151.3
Min nTPM: 106.6
Sample A Male 113.1
Sample B Male 106.6
Sample C Female 151.3
Sample D Female 140.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.5
70946633 Antisense, RP_050505_01_F05, Mouse strain C57BL/6J (56 days, male) 5.5
Pallidum
Expression energy: 6.7
70946633 Antisense, RP_050505_01_F05, Mouse strain C57BL/6J (56 days, male) 6.7

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