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GABBR1
HPA
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  • GABBR1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GABBR1
Synonyms GPRC3A, hGB1a
Gene descriptioni

Full gene name according to HGNC.

Gamma-aminobutyric acid type B receptor subunit 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

FDA approved drug targets
G-protein coupled receptors
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband p22.1
Chromosome location (bp) 29555629 - 29633976
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000204681 (version 109)
Entrez gene 2550
HGNC HGNC:4070
UniProt Q9UBS5 (UniProt - Evidence at protein level)
neXtProt NX_Q9UBS5
GeneCards GABBR1
Antibodypedia GABBR1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of a heterodimeric G-protein coupled receptor for GABA, formed by GABBR1 and GABBR2 1, 2, 3, 4, 5, 6, 7. Within the heterodimeric GABA receptor, only GABBR1 seems to bind agonists, while GABBR2 mediates coupling to G proteins 8. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of down-stream effectors, such as adenylate cyclase 9, 10, 11, 12, 13. Signaling inhibits adenylate cyclase, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipid hydrolysis 14. Calcium is required for high affinity binding to GABA (By similarity). Plays a critical role in the fine-tuning of inhibitory synaptic transmission 15. Pre-synaptic GABA receptor inhibits neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA receptor decreases neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials 16, 17, 18, 19, 20. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception (Probable). Activated by (-)-baclofen, cgp27492 and blocked by phaclofen 21, 22, 23.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

G-protein coupled receptor, Receptor, Transducer
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a receptor for gamma-aminobutyric acid (GABA), which is the main inhibitory neurotransmitter in the mammalian central nervous system. This receptor functions as a heterodimer with GABA(B) receptor 2. Defects in this gene may underlie brain disorders such as schizophrenia and epilepsy. Alternative splicing generates multiple transcript variants, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jan 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GABBR1-201
ENSP00000348248
ENST00000355973
Q9UBS5
[Direct mapping] Gamma-aminobutyric acid type B receptor subunit 1
Show all
Q5SUJ9
[Target identity:100%; Query identity:100%] Gamma-aminobutyric acid (GABA) B receptor, 1, isoform CRA_h; cDNA FLJ77697, highly similar to Homo sapiens gamma-aminobutyric acid (GABA) B receptor, 1 (GABBR1), transcript variant 2, mRNA; cDNA, FLJ92613, Homo sapiens gamma-aminobutyric acid (GABA) B receptor, 1 (GABBR1),transcript variant 2, mRNA
Show all
G-protein coupled receptors
   GPCRs excl olfactory receptors
   Family 3 (C) receptors
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007193 [adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway]
GO:0007214 [gamma-aminobutyric acid signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030425 [dendrite]
GO:0038039 [G protein-coupled receptor heterodimeric complex]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050896 [response to stimulus]
GO:0051932 [synaptic transmission, GABAergic]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0099505 [regulation of presynaptic membrane potential]
GO:0110165 [cellular anatomical entity]
GO:0150099 [neuron-glial cell signaling]
GO:1902712 [G protein-coupled GABA receptor complex]
Show all
844 aa
95.1 kDa
Yes 7
GABBR1-202
ENSP00000366211
ENST00000377012
Q9UBS5
[Direct mapping] Gamma-aminobutyric acid type B receptor subunit 1
Show all
Q5SUJ9
[Target identity:100%; Query identity:100%] Gamma-aminobutyric acid (GABA) B receptor, 1, isoform CRA_h; cDNA FLJ77697, highly similar to Homo sapiens gamma-aminobutyric acid (GABA) B receptor, 1 (GABBR1), transcript variant 2, mRNA; cDNA, FLJ92613, Homo sapiens gamma-aminobutyric acid (GABA) B receptor, 1 (GABBR1),transcript variant 2, mRNA
Show all
G-protein coupled receptors
   GPCRs excl olfactory receptors
   Family 3 (C) receptors
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007193 [adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway]
GO:0007214 [gamma-aminobutyric acid signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030425 [dendrite]
GO:0038039 [G protein-coupled receptor heterodimeric complex]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050896 [response to stimulus]
GO:0051932 [synaptic transmission, GABAergic]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0099505 [regulation of presynaptic membrane potential]
GO:0110165 [cellular anatomical entity]
GO:0150099 [neuron-glial cell signaling]
GO:1902712 [G protein-coupled GABA receptor complex]
Show all
844 aa
95.1 kDa
Yes 7
GABBR1-203
ENSP00000366215
ENST00000377016
Q9UBS5
[Direct mapping] Gamma-aminobutyric acid type B receptor subunit 1
Show all
G-protein coupled receptors
   GPCRs excl olfactory receptors
   Family 3 (C) receptors
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007193 [adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway]
GO:0007214 [gamma-aminobutyric acid signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030425 [dendrite]
GO:0038039 [G protein-coupled receptor heterodimeric complex]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050896 [response to stimulus]
GO:0051932 [synaptic transmission, GABAergic]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0099505 [regulation of presynaptic membrane potential]
GO:0110165 [cellular anatomical entity]
GO:0150099 [neuron-glial cell signaling]
GO:1902712 [G protein-coupled GABA receptor complex]
Show all
899 aa
101.5 kDa
Yes 7
GABBR1-204
ENSP00000366233
ENST00000377034
Q9UBS5
[Direct mapping] Gamma-aminobutyric acid type B receptor subunit 1
Show all
A0A1U9X7R0
[Target identity:100%; Query identity:100%] GABBR1
Show all
G-protein coupled receptors
   GPCRs excl olfactory receptors
   Family 3 (C) receptors
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Plasma proteins
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001649 [osteoblast differentiation]
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007193 [adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway]
GO:0007194 [negative regulation of adenylate cyclase activity]
GO:0007214 [gamma-aminobutyric acid signaling pathway]
GO:0008021 [synaptic vesicle]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014048 [regulation of glutamate secretion]
GO:0014049 [positive regulation of glutamate secretion]
GO:0014053 [negative regulation of gamma-aminobutyric acid secretion]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030425 [dendrite]
GO:0030673 [axolemma]
GO:0031966 [mitochondrial membrane]
GO:0032811 [negative regulation of epinephrine secretion]
GO:0033602 [negative regulation of dopamine secretion]
GO:0035094 [response to nicotine]
GO:0038037 [G protein-coupled receptor dimeric complex]
GO:0038039 [G protein-coupled receptor heterodimeric complex]
GO:0042734 [presynaptic membrane]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0043025 [neuronal cell body]
GO:0043197 [dendritic spine]
GO:0043198 [dendritic shaft]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045121 [membrane raft]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0045471 [response to ethanol]
GO:0046982 [protein heterodimerization activity]
GO:0050805 [negative regulation of synaptic transmission]
GO:0050896 [response to stimulus]
GO:0051932 [synaptic transmission, GABAergic]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060124 [positive regulation of growth hormone secretion]
GO:0097060 [synaptic membrane]
GO:0098685 [Schaffer collateral - CA1 synapse]
GO:0098793 [presynapse]
GO:0098978 [glutamatergic synapse]
GO:0098982 [GABA-ergic synapse]
GO:0099505 [regulation of presynaptic membrane potential]
GO:0099579 [G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential]
GO:0110165 [cellular anatomical entity]
GO:0150047 [G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential]
GO:0150099 [neuron-glial cell signaling]
GO:1902710 [GABA receptor complex]
GO:1902712 [G protein-coupled GABA receptor complex]
GO:1990430 [extracellular matrix protein binding]
Show all
961 aa
108.3 kDa
Yes 7
GABBR1-205
ENSP00000419755
ENST00000462632
C9JZG6
[Direct mapping] Gamma-aminobutyric acid type B receptor subunit 1
A0A1U9X7R0
[Target identity:100%; Query identity:100%] GABBR1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0050896 [response to stimulus]
GO:0051932 [synaptic transmission, GABAergic]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0099505 [regulation of presynaptic membrane potential]
GO:0110165 [cellular anatomical entity]
Show all
961 aa
108.3 kDa
Yes 7
GABBR1-209
ENSP00000417332
ENST00000476670
C9J342
[Direct mapping] Gamma-aminobutyric acid type B receptor subunit 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016021 [integral component of membrane]
Show all
966 aa
108.9 kDa
Yes 7
GABBR1-220
ENSP00000516435
ENST00000706533
A0A1U9X7R0
[Target identity:100%; Query identity:100%] GABBR1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0004930 [G protein-coupled receptor activity]
GO:0004965 [G protein-coupled GABA receptor activity]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0050896 [response to stimulus]
GO:0051932 [synaptic transmission, GABAergic]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0099505 [regulation of presynaptic membrane potential]
GO:0110165 [cellular anatomical entity]
Show all
961 aa
108.3 kDa
Yes 7

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