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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:156.4 nTPM
FANTOM5:0.3 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.4
Sample id Sample description nTPM
Area postrema
nTPM: 140.3
2054 Male, age 76, both hemispheres 159.1
2799 Male, age 61, both hemispheres 139.5
2306 Male, age 80, both hemispheres 122.2
Dorsal medullary reticular nucleus
nTPM: 150.4
2088 Male, age 76, both hemispheres 178.6
2373 Male, age 61, both hemispheres 149.9
2040 Female, age 85, both hemispheres 122.6
Dorsal motor vagal complex
nTPM: 148.6
2807 Female, age 85, both hemispheres 213.6
2813 Female, age 72, unknown 159.9
2797 Male, age 61, both hemispheres 153.2
2185 Male, age 76, both hemispheres 143.9
2133 Female, age 91, both hemispheres 143.7
2844 Male, age 55, unknown 140.8
2000 Male, age 74, unknown 130.1
2643 Male, age 74, both hemispheres 103.7
Gigantocellular reticular nuclei, medullary
nTPM: 140.4
2387 Female, age 91, both hemispheres 150.6
2310 Male, age 80, both hemispheres 150.0
2022 Male, age 76, right hemisphere 148.3
2314 Male, age 61, both hemispheres 136.5
2462 Male, age 74, both hemispheres 129.9
1876 Female, age 85, both hemispheres 127.1
Gigantocellular reticular nuclei, pars
nTPM: 154.8
2706 Male, age 80, both hemispheres 171.3
2168 Male, age 76, both hemispheres 164.3
2330 Male, age 80, both hemispheres 161.3
2336 Male, age 61, both hemispheres 139.6
2084 Female, age 85, both hemispheres 137.4
Inferior olive
nTPM: 128.0
2628 Female, age 91, both hemispheres 143.0
2563 Male, age 74, both hemispheres 135.5
2379 Male, age 80, both hemispheres 127.8
2178 Male, age 61, both hemispheres 119.9
2085 Female, age 85, both hemispheres 113.7
Lateral medullary reticular nucleus
nTPM: 141.1
2305 Male, age 74, both hemispheres 169.1
2804 Female, age 91, both hemispheres 152.3
2852 Male, age 80, both hemispheres 140.5
2374 Male, age 61, both hemispheres 133.9
2190 Female, age 85, both hemispheres 127.1
2044 Male, age 76, both hemispheres 123.7
Medial olivary nucleus
nTPM: 138.3
1962 Male, age 76, both hemispheres 146.1
2851 Male, age 80, both hemispheres 143.5
1943 Male, age 61, both hemispheres 137.3
2138 Female, age 91, both hemispheres 126.2
Medial vestibular nucleus
nTPM: 141.5
2801 Male, age 74, both hemispheres 161.7
2803 Female, age 91, both hemispheres 153.9
2093 Male, age 80, both hemispheres 139.8
2134 Male, age 76, both hemispheres 134.3
2743 Female, age 85, both hemispheres 134.2
2624 Male, age 61, both hemispheres 124.7
Motor hypoglossal nucleus
nTPM: 146.0
2277 Male, age 76, both hemispheres 179.7
2132 Female, age 85, both hemispheres 156.2
2461 Male, age 61, both hemispheres 141.9
2125 Female, age 91, both hemispheres 128.1
2182 Male, age 80, both hemispheres 124.1
Nucleus ambiguus
nTPM: 128.7
2071 Male, age 76, both hemispheres 134.3
2096 Female, age 85, both hemispheres 123.1
Nucleus cuneatus
nTPM: 153.0
2808 Female, age 85, both hemispheres 176.7
2805 Female, age 91, both hemispheres 172.7
2100 Male, age 76, both hemispheres 157.3
2562 Male, age 61, both hemispheres 155.8
2131 Male, age 76, both hemispheres 154.7
2381 Male, age 80, both hemispheres 154.7
2376 Male, age 61, both hemispheres 143.4
2380 Male, age 80, both hemispheres 143.2
2564 Male, age 74, both hemispheres 118.2
Nucleus gracilis
nTPM: 144.7
2382 Male, age 80, both hemispheres 162.7
2299 Female, age 85, both hemispheres 138.6
2627 Male, age 74, both hemispheres 132.9
Nucleus raphe obscurus
nTPM: 154.7
2142 Male, age 76, midline 166.3
2800 Male, age 61, midline 163.2
2845 Female, age 85, midline 134.6
Nucleus raphe pallidus
nTPM: 129.1
2145 Male, age 76, midline 158.4
2183 Male, age 80, midline 118.8
1924 Male, age 61, midline 110.1
Nucleus tractus solitarii
nTPM: 156.4
2656 Male, age 76, both hemispheres 176.2
2191 Female, age 85, both hemispheres 162.4
2307 Male, age 80, both hemispheres 159.8
2144 Female, age 91, right hemisphere 127.4
Parvicellular reticular nuclei
nTPM: 144.7
2558 Male, age 74, both hemispheres 158.3
2095 Male, age 76, both hemispheres 143.3
2119 Male, age 80, both hemispheres 132.3
Parvicellular reticular nuclei, medullary
nTPM: 135.6
2181 Male, age 80, left hemisphere 143.1
2091 Female, age 85, both hemispheres 138.6
2189 Female, age 91, both hemispheres 125.2
Peritrigeminal nucleus
nTPM: 124.7
2136 Male, age 76, both hemispheres 136.5
2179 Male, age 61, both hemispheres 131.6
2067 Female, age 85, both hemispheres 106.1
Prepositus hypoglossal nucleus
nTPM: 133.0
2855 Female, age 85, right hemisphere 138.5
2086 Male, age 80, both hemispheres 127.5
Spinal trigeminal nucleus, caudal
nTPM: 137.8
2642 Male, age 74, both hemispheres 146.9
2312 Male, age 61, both hemispheres 142.7
2308 Male, age 80, both hemispheres 142.2
2447 Male, age 76, both hemispheres 132.9
2390 Female, age 91, both hemispheres 124.4
Spinal trigeminal nucleus, interpolar
nTPM: 133.8
2389 Female, age 91, both hemispheres 149.0
2386 Female, age 85, both hemispheres 145.2
2033 Male, age 80, both hemispheres 130.8
2066 Male, age 76, right hemisphere 123.2
2625 Male, age 61, both hemispheres 120.7
Spinal vestibular nucleus
nTPM: 141.7
2796 Male, age 61, both hemispheres 156.0
2806 Female, age 85, both hemispheres 153.5
2186 Female, age 91, both hemispheres 143.5
2748 Male, age 76, both hemispheres 138.3
2384 Male, age 74, both hemispheres 131.1
2780 Male, age 80, both hemispheres 127.9
Superior vestibular nucleus
nTPM: 140.2
2061 Male, age 76, both hemispheres 147.8
2383 Male, age 74, both hemispheres 143.6
2015 Male, age 80, both hemispheres 129.1
Ventral medullary reticular nucleus
nTPM: 151.9
2060 Male, age 76, both hemispheres 162.6
2372 Male, age 61, both hemispheres 141.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 130.8
2118 Male, age 80, both hemispheres 148.2
1986 Male, age 76, both hemispheres 131.6
2302 Female, age 91, both hemispheres 130.1
2741 Female, age 85, both hemispheres 122.3
2180 Male, age 61, both hemispheres 122.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 0.3
FF:10155-103A2 76 years, female 0.5
FF:10038-101F2 18-64 years, mixed 0.5
FF:10174-103C3 60 years, female 0.0

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