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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:121.5 nTPM
FANTOM5:331.0 Scaled Tags Per Million

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.5
Sample id Sample description nTPM
Area postrema
nTPM: 91.0
2054 Male, age 76, both hemispheres 127.9
2799 Male, age 61, both hemispheres 108.8
2306 Male, age 80, both hemispheres 36.4
Dorsal medullary reticular nucleus
nTPM: 73.8
2040 Female, age 85, both hemispheres 81.3
2088 Male, age 76, both hemispheres 75.0
2373 Male, age 61, both hemispheres 65.0
Dorsal motor vagal complex
nTPM: 69.7
2797 Male, age 61, both hemispheres 108.1
2185 Male, age 76, both hemispheres 78.1
2133 Female, age 91, both hemispheres 71.0
2813 Female, age 72, unknown 70.7
2000 Male, age 74, unknown 68.1
2844 Male, age 55, unknown 65.8
2643 Male, age 74, both hemispheres 57.7
2807 Female, age 85, both hemispheres 38.5
Gigantocellular reticular nuclei, medullary
nTPM: 86.0
2022 Male, age 76, right hemisphere 124.2
1876 Female, age 85, both hemispheres 111.6
2387 Female, age 91, both hemispheres 89.6
2314 Male, age 61, both hemispheres 68.7
2462 Male, age 74, both hemispheres 66.2
2310 Male, age 80, both hemispheres 55.6
Gigantocellular reticular nuclei, pars
nTPM: 60.9
2084 Female, age 85, both hemispheres 97.3
2336 Male, age 61, both hemispheres 61.9
2706 Male, age 80, both hemispheres 51.6
2330 Male, age 80, both hemispheres 47.0
2168 Male, age 76, both hemispheres 46.8
Inferior olive
nTPM: 97.3
2563 Male, age 74, both hemispheres 132.9
2379 Male, age 80, both hemispheres 99.5
2085 Female, age 85, both hemispheres 98.2
2628 Female, age 91, both hemispheres 79.0
2178 Male, age 61, both hemispheres 77.0
Lateral medullary reticular nucleus
nTPM: 68.5
2044 Male, age 76, both hemispheres 136.3
2804 Female, age 91, both hemispheres 88.5
2374 Male, age 61, both hemispheres 58.7
2190 Female, age 85, both hemispheres 56.1
2305 Male, age 74, both hemispheres 41.5
2852 Male, age 80, both hemispheres 29.8
Medial olivary nucleus
nTPM: 73.5
2138 Female, age 91, both hemispheres 112.2
1962 Male, age 76, both hemispheres 94.3
2851 Male, age 80, both hemispheres 45.5
1943 Male, age 61, both hemispheres 42.2
Medial vestibular nucleus
nTPM: 99.1
2803 Female, age 91, both hemispheres 116.8
2624 Male, age 61, both hemispheres 112.2
2134 Male, age 76, both hemispheres 105.5
2093 Male, age 80, both hemispheres 103.5
2743 Female, age 85, both hemispheres 88.2
2801 Male, age 74, both hemispheres 68.5
Motor hypoglossal nucleus
nTPM: 62.9
2277 Male, age 76, both hemispheres 105.5
2125 Female, age 91, both hemispheres 85.6
2461 Male, age 61, both hemispheres 57.3
2132 Female, age 85, both hemispheres 36.3
2182 Male, age 80, both hemispheres 29.5
Nucleus ambiguus
nTPM: 84.7
2071 Male, age 76, both hemispheres 133.8
2096 Female, age 85, both hemispheres 35.6
Nucleus cuneatus
nTPM: 70.8
2376 Male, age 61, both hemispheres 113.5
2562 Male, age 61, both hemispheres 103.5
2564 Male, age 74, both hemispheres 89.3
2805 Female, age 91, both hemispheres 82.6
2131 Male, age 76, both hemispheres 59.1
2100 Male, age 76, both hemispheres 59.0
2808 Female, age 85, both hemispheres 47.2
2380 Male, age 80, both hemispheres 44.5
2381 Male, age 80, both hemispheres 38.1
Nucleus gracilis
nTPM: 46.8
2627 Male, age 74, both hemispheres 66.3
2299 Female, age 85, both hemispheres 44.1
2382 Male, age 80, both hemispheres 29.9
Nucleus raphe obscurus
nTPM: 75.6
2142 Male, age 76, midline 125.1
2800 Male, age 61, midline 51.7
2845 Female, age 85, midline 49.8
Nucleus raphe pallidus
nTPM: 60.9
2145 Male, age 76, midline 73.3
1924 Male, age 61, midline 56.6
2183 Male, age 80, midline 52.9
Nucleus tractus solitarii
nTPM: 67.1
2144 Female, age 91, right hemisphere 114.0
2656 Male, age 76, both hemispheres 72.9
2191 Female, age 85, both hemispheres 57.2
2307 Male, age 80, both hemispheres 24.3
Parvicellular reticular nuclei
nTPM: 76.5
2095 Male, age 76, both hemispheres 89.2
2119 Male, age 80, both hemispheres 78.6
2558 Male, age 74, both hemispheres 61.8
Parvicellular reticular nuclei, medullary
nTPM: 90.8
2189 Female, age 91, both hemispheres 98.4
2091 Female, age 85, both hemispheres 91.9
2181 Male, age 80, left hemisphere 82.2
Peritrigeminal nucleus
nTPM: 88.6
2136 Male, age 76, both hemispheres 121.7
2067 Female, age 85, both hemispheres 88.7
2179 Male, age 61, both hemispheres 55.3
Prepositus hypoglossal nucleus
nTPM: 73.2
2855 Female, age 85, right hemisphere 79.4
2086 Male, age 80, both hemispheres 67.0
Spinal trigeminal nucleus, caudal
nTPM: 64.4
2390 Female, age 91, both hemispheres 85.5
2447 Male, age 76, both hemispheres 83.2
2642 Male, age 74, both hemispheres 58.1
2312 Male, age 61, both hemispheres 58.0
2308 Male, age 80, both hemispheres 37.3
Spinal trigeminal nucleus, interpolar
nTPM: 96.1
2625 Male, age 61, both hemispheres 145.1
2066 Male, age 76, right hemisphere 104.8
2389 Female, age 91, both hemispheres 86.5
2033 Male, age 80, both hemispheres 85.3
2386 Female, age 85, both hemispheres 59.0
Spinal vestibular nucleus
nTPM: 103.1
2748 Male, age 76, both hemispheres 129.1
2796 Male, age 61, both hemispheres 116.8
2806 Female, age 85, both hemispheres 106.0
2186 Female, age 91, both hemispheres 93.9
2384 Male, age 74, both hemispheres 92.2
2780 Male, age 80, both hemispheres 80.8
Superior vestibular nucleus
nTPM: 121.5
2061 Male, age 76, both hemispheres 157.3
2383 Male, age 74, both hemispheres 113.7
2015 Male, age 80, both hemispheres 93.4
Ventral medullary reticular nucleus
nTPM: 84.1
2060 Male, age 76, both hemispheres 94.1
2372 Male, age 61, both hemispheres 74.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 72.9
1986 Male, age 76, both hemispheres 130.5
2302 Female, age 91, both hemispheres 78.3
2741 Female, age 85, both hemispheres 63.1
2180 Male, age 61, both hemispheres 56.1
2118 Male, age 80, both hemispheres 36.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

331.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 331.0
FF:10174-103C3 60 years, female 721.3
FF:10155-103A2 76 years, female 142.3
FF:10038-101F2 18-64 years, mixed 129.4

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