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  • SUMMARY

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  • TMSB4X
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TMSB4X is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4423.69
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 7438.0
Number of samples 497
Samples
Sample Description pTPM
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 32414.3
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 27683.6
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 26487.2
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 20532.4
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 20350.7
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 20084.2
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 19507.6
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 19212.4
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 19028.9
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 18492.1
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 18403.8
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 17957.5
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 17024.4
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 16582.1
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 16193.4
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 15930.3
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 15545.8
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 15518.3
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 15496.0
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 15435.0
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 15386.2
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 15284.1
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 15235.5
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 15140.1
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 15061.4
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 15030.9
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 14906.0
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 14834.5
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 14741.5
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 14487.5
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 14338.5
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 14327.0
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 14246.5
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 14011.0
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 13669.1
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 13321.6
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 13178.8
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 13115.6
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 13105.2
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 12967.7
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 12807.4
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 12789.8
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 12616.3
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 12577.1
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 12550.6
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 12480.6
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 12097.0
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 12000.0
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 11916.5
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 11902.3
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 11867.6
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 11727.6
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 11708.2
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 11690.4
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 11657.4
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 11549.4
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 11522.0
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 11321.5
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 11318.4
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 11270.5
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 11199.2
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 11115.4
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 11087.4
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 11080.3
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 11058.6
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 11014.8
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 10971.8
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 10914.7
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 10905.7
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 10879.2
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 10822.0
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 10786.1
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 10764.0
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 10746.6
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 10686.3
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 10565.2
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 10438.8
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 10398.8
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 10384.1
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 10317.0
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 10313.0
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 10287.0
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 10278.4
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 10269.4
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 10228.8
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 10179.5
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 10135.3
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 10120.0
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 10084.8
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 10072.5
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 10046.0
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 10041.4
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 9961.9
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 9949.6
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 9911.2
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 9880.7
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 9812.2
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 9792.5
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 9778.5
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 9753.7
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 9737.7
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 9720.9
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 9704.1
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 9681.2
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 9659.2
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 9628.6
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 9621.2
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 9592.6
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 9586.4
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 9572.1
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 9567.2
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 9557.1
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 9477.4
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 9459.0
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 9439.1
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 9411.0
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 9378.6
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 9342.1
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 9304.3
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 9303.2
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 9283.3
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 9262.8
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 9235.3
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 9224.9
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 9197.0
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 9181.8
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 9132.7
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 9124.2
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 9107.7
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 9097.2
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 9094.0
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 9073.6
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 9062.3
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 9057.4
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 8957.6
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 8789.9
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 8781.7
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 8719.0
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 8709.5
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 8702.3
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 8694.0
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 8656.9
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 8649.8
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 8638.6
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 8601.6
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 8590.2
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 8587.4
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 8577.6
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 8552.2
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 8506.8
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 8503.5
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 8500.3
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 8463.4
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 8445.6
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 8440.9
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 8420.1
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 8405.1
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 8388.6
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 8371.6
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 8353.6
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 8308.1
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 8308.0
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 8297.1
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 8262.7
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 8261.3
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 8226.5
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 8219.2
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 8177.8
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 8160.6
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 8138.8
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 8133.7
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 8130.9
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 8120.3
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 8110.8
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 8110.5
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 8088.3
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 8041.5
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 8024.5
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 8000.3
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 7996.0
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 7987.8
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 7935.2
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 7913.4
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 7892.0
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 7854.9
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 7841.5
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 7840.1
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 7838.6
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 7826.7
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 7781.2
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 7694.3
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 7675.5
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 7667.3
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 7650.7
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 7631.1
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 7626.5
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 7624.2
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 7615.2
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 7613.5
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 7593.3
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 7590.1
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 7572.4
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 7568.3
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 7567.2
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 7548.1
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 7547.4
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 7537.0
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 7498.1
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 7434.2
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 7410.7
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 7394.6
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 7379.8
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 7371.6
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 7343.8
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 7336.7
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 7331.6
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 7326.4
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 7320.7
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 7316.5
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 7279.8
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 7273.4
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 7262.5
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 7256.9
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 7217.4
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 7198.7
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 7198.0
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 7192.4
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 7176.4
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 7149.2
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 7093.9
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 7074.5
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 7051.2
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 7033.1
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 7020.1
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 7011.7
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 6993.7
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 6969.1
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 6961.0
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 6958.1
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 6957.9
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 6931.9
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 6925.5
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 6874.7
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 6850.9
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 6838.9
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 6824.1
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 6816.5
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 6800.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 6782.1
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 6780.5
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 6744.3
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 6737.6
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 6734.7
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 6732.6
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 6699.2
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 6677.7
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 6668.7
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 6637.9
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 6626.1
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 6624.8
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 6610.1
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 6584.8
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 6578.8
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 6571.2
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 6523.1
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 6505.7
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 6502.9
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 6484.7
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 6477.2
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 6476.8
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 6475.8
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 6473.4
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 6453.1
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 6417.3
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 6413.3
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 6411.2
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 6404.3
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 6401.0
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 6399.6
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 6397.7
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 6350.3
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 6331.0
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 6320.1
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 6196.3
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 6194.1
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 6128.1
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 6087.8
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 6078.8
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 6058.8
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 6054.0
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 6035.0
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 6007.6
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 5987.4
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 5984.0
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 5976.7
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 5933.7
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 5929.4
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 5921.3
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 5917.6
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 5917.6
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 5915.6
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 5903.8
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 5894.8
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 5893.3
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 5885.2
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 5870.3
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 5850.6
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 5827.6
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 5785.2
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 5781.2
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 5773.2
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 5761.4
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 5736.1
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 5734.7
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 5734.4
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 5712.9
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 5698.2
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 5674.8
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 5649.3
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 5567.3
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 5563.5
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 5524.7
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 5524.2
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 5522.4
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 5519.2
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 5499.6
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 5459.4
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 5452.6
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 5434.6
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 5433.5
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 5431.4
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 5429.8
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 5427.8
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 5366.6
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 5363.5
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 5353.8
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 5352.0
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 5335.0
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 5328.2
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 5310.0
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 5293.4
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 5279.4
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 5277.0
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 5277.0
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 5276.1
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 5270.4
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 5266.7
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 5264.2
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 5241.7
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 5217.9
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 5204.0
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 5203.1
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 5137.9
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 5114.7
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 5100.5
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 5086.0
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 5078.9
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 5064.5
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 5049.0
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 5047.7
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 5040.7
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 4984.0
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 4973.5
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 4960.4
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 4948.9
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 4938.8
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 4927.7
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 4880.2
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 4873.0
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 4872.8
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 4861.3
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 4842.4
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 4840.7
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 4832.5
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 4823.0
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 4819.7
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 4795.4
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 4779.8
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 4767.6
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 4765.0
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4746.7
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 4744.1
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 4739.9
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 4723.6
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 4719.0
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 4698.1
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 4683.5
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 4646.5
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 4643.3
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 4633.4
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 4526.4
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4523.1
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 4515.0
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 4472.4
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 4448.0
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 4430.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 4416.5
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 4411.5
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 4365.9
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 4351.6
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 4328.5
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 4324.6
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 4303.0
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 4251.1
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 4245.3
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 4213.1
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 4207.6
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 4203.8
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 4196.4
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 4192.0
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 4105.6
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 4075.1
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 4062.3
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 4060.5
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 4050.8
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 4046.5
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 4036.5
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 4032.4
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 4026.1
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 4021.9
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 3967.3
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 3937.7
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 3912.9
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 3867.1
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 3836.1
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 3817.1
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 3772.7
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 3759.7
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 3754.4
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 3744.1
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 3695.3
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 3684.2
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 3648.4
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 3639.7
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 3633.6
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 3603.9
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 3587.5
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 3543.4
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 3535.1
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 3513.2
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 3490.3
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 3444.6
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 3423.6
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 3408.1
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 3396.1
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 3389.0
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 3367.5
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 3351.8
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 3323.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 3284.9
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 3253.7
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 3252.9
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 3251.0
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 3225.8
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 3211.2
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 3203.8
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 3184.1
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 3157.6
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 3141.1
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 3126.6
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 3109.3
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 3093.5
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 3053.0
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 3046.6
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 3019.3
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3010.0
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 2985.5
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 2964.2
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 2913.0
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 2896.8
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 2808.7
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 2771.4
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 2740.7
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 2735.6
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 2684.2
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 2618.7
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 2609.7
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 2519.9
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 2478.7
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 2456.9
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 2413.0
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 2393.4
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 2344.8
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 2206.0
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 2057.9
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 2018.1
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 1995.5
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 1984.4
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 1956.9
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 1933.7
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 1927.0
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 1767.8
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 1688.0
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 1588.3
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1503.4
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 1171.5
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 1124.0
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TMSB4X is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 6992.2
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 7825.0
Number of samples 105
Samples
Sample Description pTPM
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 17555.5
L603 70 years, female, stage:Stage IB, dead, 972 days 15674.8
L569 76 years, female, stage:Stage IA, alive, 2531 days 15123.4
L400 78 years, male, stage:Stage IIA, dead, 1233 days 13490.0
L802 62 years, female, stage:Stage IA, dead, 773 days 13073.1
L703 71 years, male, stage:Stage IIA, dead, 1137 days 12125.4
L766 59 years, male, stage:Stage IB, alive, 1793 days 11821.1
L404 74 years, female, stage:Stage IIA, dead, 2318 days 11714.2
L546 57 years, male, stage:Stage IA, dead, 973 days 11698.7
L782 73 years, female, stage:Stage IIB, alive, 3371 days 11551.5
L816 73 years, female, stage:Stage IIA, dead, 353 days 11180.9
L557 81 years, female, stage:Stage IB, alive, 2580 days 11106.5
L826 45 years, female, stage:Stage IV, dead, 935 days 10971.2
L885 62 years, female, stage:Stage IA, alive, 1618 days 10876.5
L890 56 years, female, stage:Stage IIB, dead, 1264 days 10733.2
L829 76 years, male, stage:Stage IA, alive, 2173 days 10647.8
L832 65 years, female, stage:Stage IA, alive, 2145 days 10589.7
L875 69 years, female, stage:Stage IA, alive, 1675 days 10419.2
L682 64 years, female, stage:Stage IIB, dead, 840 days 10323.3
L768 60 years, male, stage:Stage IIIA, dead, 472 days 10301.9
L439 80 years, male, stage:Stage IIB, dead, 2773 days 10176.7
L530 76 years, female, stage:Stage IIA, dead, 308 days 9973.1
L872 71 years, female, stage:Stage IA, alive, 1793 days 9920.4
L678 65 years, female, stage:Stage IB, dead, 1114 days 9698.1
L446 71 years, female, stage:Stage IIB, dead, 415 days 9636.8
L413 72 years, female, stage:Stage IIIA, dead, 313 days 9589.0
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 9380.6
L865 75 years, female, stage:Stage IIB, alive, 1927 days 9327.4
L731 59 years, female, stage:Stage IA, dead, 964 days 9286.7
L626 76 years, female, stage:Stage IA, dead, 1994 days 9051.6
L605 74 years, female, stage:Stage IA, alive, 2460 days 8953.9
L828 68 years, female, stage:Stage IIB, alive, 2222 days 8926.3
L871 74 years, male, stage:Stage IB, dead, 873 days 8842.0
L602 69 years, female, stage:Stage IA, alive, 2277 days 8806.5
L791 66 years, female, stage:Stage IIIA, dead, 368 days 8784.0
L616 54 years, male, stage:Stage IA, dead, 410 days 8730.1
L877 70 years, female, stage:Stage IA, alive, 1599 days 8713.7
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 8516.4
L749 49 years, female, stage:Stage IIIA, dead, 189 days 8497.1
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 8489.9
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 8445.8
L484 64 years, female, stage:Stage IA, alive, 2895 days 8348.7
L746 64 years, female, stage:Stage IIIA, dead, 594 days 8307.4
L808 48 years, female, stage:Stage IA, alive, 3001 days 8236.1
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 8148.2
L455 52 years, female, stage:Stage IA, alive, 3315 days 8137.3
L462 67 years, male, stage:Stage IIIA, dead, 568 days 8093.6
L673 74 years, female, stage:Stage IA, dead, 568 days 7928.9
L810 64 years, female, stage:Stage IIIA, dead, 625 days 7922.0
L531 74 years, male, stage:Stage IB, dead, 928 days 7893.0
L827 70 years, male, stage:Stage IIB, dead, 1105 days 7655.4
L656 58 years, male, stage:Stage IA, alive, 2227 days 7604.8
L662 66 years, male, stage:Stage IA, dead, 865 days 7440.4
L620 70 years, female, stage:Stage IIIA, dead, 338 days 7423.7
L887 77 years, male, stage:Stage IA, dead, 374 days 7405.0
L541 70 years, female, stage:Stage IIIA, dead, 915 days 7388.3
L738 74 years, female, stage:Stage IB, dead, 1314 days 7333.2
L850 77 years, male, stage:Stage IIIA, dead, 997 days 7260.1
L458 76 years, female, stage:Stage IA, dead, 223 days 6992.2
L545 60 years, female, stage:Stage IA, alive, 2874 days 6941.9
L493 56 years, female, stage:Stage IIB, alive, 2945 days 6739.6
L778 65 years, female, stage:Stage IA, alive, 1600 days 6719.9
L695 68 years, female, stage:Stage IB, dead, 1762 days 6694.2
L773 64 years, female, stage:Stage IV, dead, 311 days 6617.2
L551 62 years, male, stage:Stage IA, alive, 2924 days 6563.9
L735 75 years, female, stage:Stage IA, alive, 1830 days 6238.3
L565 59 years, female, stage:Stage IB, dead, 543 days 6200.4
L879 75 years, male, stage:Stage IV, dead, 873 days 6200.3
L473 66 years, female, stage:Stage IA, alive, 3021 days 6172.9
L831 62 years, female, stage:Stage IB, alive, 2152 days 6156.6
L585 70 years, female, stage:Stage IIA, dead, 402 days 6119.2
L566 58 years, male, stage:Stage IB, alive, 2489 days 6100.2
L532 69 years, female, stage:Stage IA, dead, 301 days 6079.2
L617 68 years, male, stage:Stage IIIA, dead, 238 days 6029.3
L593 78 years, male, stage:Stage IA, dead, 2436 days 6018.4
L663 62 years, female, stage:Stage IB, alive, 2018 days 5968.5
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 5852.9
L688 57 years, male, stage:Stage IIIA, dead, 789 days 5844.1
L873 62 years, female, stage:Stage IA, alive, 1740 days 5742.6
L601 75 years, male, stage:Stage IB, dead, 2068 days 5604.9
L638 65 years, male, stage:Stage IA, alive, 2076 days 5593.8
L725 64 years, female, stage:Stage IA, alive, 1830 days 5582.6
L630 65 years, female, stage:Stage IA, dead, 1733 days 5579.0
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 5522.9
L543 65 years, male, stage:Stage IA, alive, 2711 days 5520.3
L867 62 years, female, stage:Stage IIIA, dead, 317 days 5492.9
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 5481.1
L800 66 years, female, stage:Stage IA, dead, 2417 days 5469.1
L728 77 years, male, stage:Stage IIB, dead, 1128 days 5416.7
L561 62 years, female, stage:Stage IA, alive, 2543 days 5292.5
L504 65 years, female, stage:Stage IA, dead, 1295 days 5224.9
L689 69 years, male, stage:Stage IA, alive, 1943 days 5147.2
L613 72 years, male, stage:Stage IIIA, dead, 19 days 5080.7
L880 75 years, female, stage:Stage IA, alive, 1767 days 4973.8
L440 80 years, male, stage:Stage IIB, dead, 651 days 4807.0
L851 70 years, male, stage:Stage IB, dead, 1315 days 4725.7
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 4414.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 4230.9
L607 59 years, male, stage:Stage IB, alive, 2572 days 4042.2
L842 62 years, female, stage:Stage IB, alive, 2005 days 4038.1
L838 71 years, female, stage:Stage IA, dead, 1005 days 3730.8
L606 55 years, male, stage:Stage IA, alive, 2336 days 3663.2
L710 72 years, female, stage:Stage IIA, alive, 1775 days 3459.5
L683 77 years, female, stage:Stage IIA, dead, 612 days 3254.0
L599 80 years, male, stage:Stage IB, dead, 2083 days 3042.5
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TMSB4X is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5241.99
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5047.2
Number of samples 489
Samples
Sample Description pTPM
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 31275.5
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 17550.8
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 16003.4
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 15847.5
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 15357.3
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 13913.5
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 13442.0
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 12944.0
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 12301.6
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 12055.3
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 11937.4
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 11884.4
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 11838.5
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 11499.3
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 11444.0
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 11204.6
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 11076.6
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 10891.7
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 10812.6
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 10779.3
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 10711.1
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 10627.1
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 10513.3
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 10440.7
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 10432.4
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 10144.2
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 10137.0
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 10040.8
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 9864.6
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 9725.7
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 9687.3
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 9661.7
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 9534.4
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 9522.2
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 9487.2
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 9196.2
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 9088.0
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 9007.8
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 8870.7
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 8841.6
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 8786.0
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 8785.9
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 8783.4
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 8682.8
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 8635.5
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 8568.8
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 8514.0
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 8467.4
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 8392.4
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 8307.4
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 8255.8
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 8223.6
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 8167.2
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 8142.4
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 8122.7
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 8120.9
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 8114.0
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 8015.6
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 7997.2
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 7987.3
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 7921.4
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 7874.1
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 7842.5
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 7811.6
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 7803.3
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 7732.4
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 7642.4
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 7565.0
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 7484.4
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 7446.2
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 7438.9
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 7426.6
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 7413.6
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 7406.5
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 7401.9
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 7374.5
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 7348.9
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 7323.4
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 7316.8
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 7307.8
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 7269.1
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 7258.1
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 7230.0
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 7229.0
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 7174.3
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 7170.2
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 7133.5
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 7077.9
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 7071.4
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 7039.2
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 7023.3
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 7009.0
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 6963.2
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 6942.9
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 6918.8
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 6891.5
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 6886.7
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 6880.2
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 6841.8
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 6841.8
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 6823.0
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 6810.7
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 6807.7
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 6780.6
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 6745.6
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 6706.3
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 6704.4
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 6660.0
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 6633.5
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 6595.9
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 6593.4
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 6576.6
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 6568.0
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 6536.8
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 6529.4
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 6528.8
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 6507.5
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 6487.7
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 6456.2
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 6415.4
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 6353.6
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 6350.1
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 6346.3
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 6326.5
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 6319.0
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 6317.1
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 6303.9
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 6301.4
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 6284.4
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 6280.4
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 6273.7
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 6231.9
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 6215.7
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 6172.7
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 6090.5
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 6074.4
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 6056.4
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 6040.7
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 6004.9
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 5975.8
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 5974.2
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 5968.6
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 5954.9
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 5924.0
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 5903.4
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 5884.9
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 5882.7
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 5880.7
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 5879.9
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 5878.3
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 5873.1
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 5816.1
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 5807.2
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 5802.5
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 5768.9
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 5763.8
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 5736.9
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 5713.5
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 5641.4
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 5639.8
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 5610.3
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 5583.9
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 5577.1
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 5563.2
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 5549.3
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 5525.1
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 5484.8
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 5460.1
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 5458.1
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 5427.4
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 5401.3
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 5390.0
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 5380.7
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 5380.4
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 5377.8
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 5368.2
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 5335.7
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 5332.4
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 5319.9
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 5305.0
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 5295.1
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 5242.0
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 5236.2
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 5224.2
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 5137.9
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 5122.4
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 5121.0
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 5076.5
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 5074.6
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 5068.3
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 5030.5
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 5021.9
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 4996.8
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 4960.1
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 4959.1
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 4938.3
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 4905.8
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 4902.4
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 4885.8
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 4868.4
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 4831.5
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 4830.9
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 4827.9
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 4821.2
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 4777.2
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 4761.4
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 4755.8
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 4752.4
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 4743.6
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 4693.9
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 4671.8
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 4670.1
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 4655.1
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 4651.2
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 4634.2
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 4623.4
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 4619.4
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 4607.5
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 4605.9
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 4603.7
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 4592.5
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 4574.1
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 4535.3
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 4532.0
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 4525.4
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 4525.2
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 4511.1
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 4505.6
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 4493.7
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 4474.9
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 4471.5
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 4439.6
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 4438.0
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 4432.5
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 4424.8
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 4423.9
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 4422.9
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 4418.3
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 4411.9
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 4407.6
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 4404.5
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 4393.8
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 4392.0
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 4386.8
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 4380.2
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 4375.4
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 4334.6
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 4324.1
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 4300.8
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 4295.9
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 4289.5
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 4274.3
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 4272.4
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 4256.0
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 4221.1
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 4205.7
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 4202.7
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 4200.1
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 4199.9
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 4194.2
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 4184.6
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 4179.8
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 4171.0
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 4166.9
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 4166.0
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 4165.2
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 4157.2
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 4155.4
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 4144.5
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 4118.7
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 4105.5
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 4103.6
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 4099.9
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 4087.9
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 4072.9
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 4072.1
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 4069.1
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 4069.0
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 4066.3
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 4060.3
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 4055.6
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 4050.0
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 4046.9
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 4037.0
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 4028.6
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 4016.4
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 4014.4
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 4013.7
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 4007.2
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 4004.7
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 3989.7
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3989.4
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 3967.4
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 3962.8
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 3959.5
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 3954.3
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 3935.5
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 3934.2
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 3931.8
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 3925.5
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 3916.6
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 3904.0
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 3903.7
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 3887.5
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 3881.6
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 3862.9
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 3850.0
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 3846.5
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 3840.2
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 3838.9
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 3838.1
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 3821.8
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 3808.0
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 3778.9
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 3777.0
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 3754.4
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 3750.3
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 3742.0
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 3729.8
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 3729.1
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 3727.9
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 3725.7
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 3705.1
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 3679.0
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 3665.4
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 3659.7
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 3653.0
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 3652.6
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 3613.9
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 3578.3
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 3571.1
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 3565.2
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 3562.3
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 3553.8
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 3539.9
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 3539.2
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 3494.0
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3480.3
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 3468.2
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3454.3
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 3449.2
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 3434.9
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 3412.0
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 3411.2
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 3407.6
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 3395.7
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 3392.4
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 3391.7
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 3383.5
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 3362.4
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 3361.6
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 3355.2
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 3286.2
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 3277.5
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 3273.5
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 3250.7
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 3238.1
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 3232.9
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 3224.1
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 3216.4
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 3202.7
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 3190.4
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 3180.0
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 3163.9
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 3146.1
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 3137.1
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 3125.4
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 3122.7
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 3116.7
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 3075.6
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 3071.8
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 3064.6
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 3052.6
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 3040.9
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 3040.9
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 3031.1
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 3025.0
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 3000.0
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 2997.3
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 2995.9
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 2990.7
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 2988.1
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 2986.4
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 2980.8
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 2974.9
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 2971.5
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 2963.1
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 2958.4
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 2943.8
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 2939.9
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 2935.8
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 2903.8
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 2885.4
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 2882.8
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 2878.2
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 2870.6
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 2866.5
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 2863.3
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 2834.2
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 2819.9
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 2810.9
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 2785.2
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 2759.7
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 2744.9
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 2740.0
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 2737.6
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 2720.8
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 2717.1
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 2714.4
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 2714.1
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 2706.2
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 2701.5
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 2676.2
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 2675.1
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 2660.0
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 2610.6
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2608.8
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 2604.6
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 2553.4
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 2549.3
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 2523.9
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 2517.6
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 2496.2
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 2481.8
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 2479.1
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 2440.7
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 2431.7
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 2419.9
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 2414.3
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 2398.6
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 2386.9
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 2362.2
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 2358.9
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 2357.7
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 2346.9
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 2320.0
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 2316.3
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 2288.1
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2233.8
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 2232.9
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 2232.0
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 2222.0
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 2198.7
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 2193.8
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2176.7
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 2166.7
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 2152.8
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 2149.4
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 2147.9
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 2119.6
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 2096.6
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 2090.0
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 2086.6
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 2075.5
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 2072.4
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 2048.7
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 2023.1
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 2019.2
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 2011.8
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 1948.5
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 1948.4
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 1893.8
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 1882.2
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 1869.5
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 1854.6
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 1839.8
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 1826.5
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 1816.8
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 1761.2
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 1756.2
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 1678.5
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 1663.1
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 1651.4
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 1639.0
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 1622.9
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 1593.9
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 1575.2
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 1567.7
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 1450.5
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 1419.2
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 1397.4
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 1324.2
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 1297.3
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 1295.5
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 1246.9
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 1232.3
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 1145.0
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 1109.2
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 961.3
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

TMSB4X is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4514.97
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5322.7
Number of samples 68
Samples
Sample Description pTPM
L472 71 years, male, stage:Stage IB, dead, 423 days 10230.2
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 9493.7
L736 67 years, male, stage:Stage IA, dead, 1195 days 9411.3
L719 63 years, male, stage:Stage IB, alive, 1615 days 9170.2
L685 71 years, female, stage:Stage IIB, alive, 1944 days 8122.3
L650 69 years, female, stage:Stage IB, dead, 986 days 7410.3
L442 75 years, female, stage:Stage IB, dead, 2433 days 6784.2
L860 77 years, male, stage:Stage IA, alive, 2056 days 6743.3
L824 70 years, male, stage:Stage IA, dead, 665 days 6643.1
L490 58 years, male, stage:Stage IA, dead, 716 days 6642.0
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 6637.9
L655 62 years, male, stage:Stage IIA, dead, 1603 days 6451.4
L712 61 years, male, stage:Stage IA, alive, 1698 days 6315.2
L715 69 years, female, stage:Stage IIIA, dead, 150 days 6302.8
L723 67 years, male, stage:Stage IIA, dead, 433 days 6249.1
L608 73 years, male, stage:Stage IA, alive, 2350 days 6070.1
L820 73 years, female, stage:Stage IA, alive, 2405 days 5927.4
L642 67 years, male, stage:Stage IB, dead, 1167 days 5863.6
L559 72 years, male, stage:Stage IIB, alive, 2615 days 5767.3
L767 67 years, male, stage:Stage IA, alive, 1718 days 5765.2
L753 61 years, male, stage:Stage IIA, alive, 1705 days 5752.8
L788 54 years, female, stage:Stage IA, alive, 3385 days 5666.7
L444 74 years, female, stage:Stage IIB, alive, 3337 days 5626.5
L470 78 years, female, stage:Stage IB, dead, 1774 days 5623.7
L854 62 years, female, stage:Stage IB, alive, 2256 days 5617.5
L568 77 years, female, stage:Stage IIB, dead, 71 days 5595.9
L661 66 years, male, stage:Stage IA, dead, 1123 days 5473.3
L406 64 years, male, stage:Stage IA, alive, 3057 days 5461.0
L633 77 years, female, stage:Stage IA, alive, 2102 days 5447.4
L652 82 years, male, stage:Stage IA, dead, 5 days 5428.5
L644 67 years, male, stage:Stage IA, dead, 282 days 5406.7
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 5298.5
L459 75 years, male, stage:Stage IIA, alive, 3181 days 5273.2
L856 69 years, male, stage:Stage IA, dead, 1465 days 5238.1
L539 78 years, male, stage:Stage IB, dead, 370 days 5159.7
L864 66 years, female, stage:Stage IA, alive, 2192 days 5119.3
L747 74 years, female, stage:Stage IA, dead, 1112 days 5062.3
L886 71 years, male, stage:Stage IB, dead, 1932 days 5034.6
L563 61 years, female, stage:Stage IIB, dead, 1216 days 5006.6
L466 65 years, female, stage:Stage IIIA, dead, 412 days 4989.2
L760 80 years, male, stage:Stage IIA, alive, 1895 days 4913.3
L483 65 years, male, stage:Stage IB, dead, 77 days 4908.6
L488 61 years, female, stage:Stage IIA, alive, 2993 days 4876.4
L755 82 years, male, stage:Stage IIA, dead, 227 days 4843.4
L857 69 years, male, stage:Stage IB, dead, 226 days 4840.7
L758 84 years, male, stage:Stage IA, dead, 1562 days 4833.6
L744 75 years, male, stage:Stage IA, alive, 1614 days 4831.7
L456 48 years, male, stage:Stage IIA, dead, 1660 days 4671.6
L756 72 years, male, stage:Stage IB, alive, 1796 days 4613.1
L852 64 years, male, stage:Stage IB, dead, 700 days 4522.1
L881 70 years, male, stage:Stage IB, alive, 1752 days 4507.9
L468 53 years, male, stage:Stage IB, alive, 3004 days 4499.7
L604 67 years, male, stage:Stage IIA, dead, 286 days 4477.6
L592 61 years, male, stage:Stage IB, alive, 2368 days 4265.2
L464 66 years, male, stage:Stage IB, dead, 1935 days 4159.2
L586 67 years, male, stage:Stage IIA, dead, 784 days 4115.0
L496 77 years, male, stage:Stage IB, alive, 2761 days 3997.1
L658 65 years, female, stage:Stage IIB, alive, 2083 days 3924.2
L529 79 years, female, stage:Stage IA, alive, 2775 days 3809.4
L420 57 years, female, stage:Stage IIB, dead, 295 days 3646.7
L447 67 years, male, stage:Stage IIB, alive, 3203 days 3438.9
L534 66 years, male, stage:Stage IIA, alive, 2693 days 3395.6
L818 67 years, male, stage:Stage IB, alive, 2480 days 3317.5
L858 69 years, female, stage:Stage IIB, dead, 558 days 3191.6
L884 71 years, male, stage:Stage IIA, alive, 1627 days 2745.0
L739 49 years, female, stage:Stage IIIA, dead, 352 days 2731.2
L572 58 years, male, stage:Stage IA, alive, 2532 days 2514.7
L457 46 years, female, stage:Stage IIA, alive, 2901 days 2074.8
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0069360003 Tumor 1.9
CPT0146880004 Tumor 1.4
CPT0082740004 Tumor 1.1
CPT0013600003 Tumor 1.0
CPT0082850004 Tumor 1.0
CPT0052940004 Tumor 0.7
CPT0125810003 Tumor 0.6
CPT0011930003 Normal 0.6
CPT0082890003 Normal 0.6
CPT0001390003 Normal 0.6
CPT0113210003 Tumor 0.5
CPT0146680004 Tumor 0.5
CPT0015410003 Tumor 0.5
CPT0111300003 Tumor 0.5
CPT0011710004 Tumor 0.5
CPT0110860004 Tumor 0.5
CPT0021450003 Tumor 0.4
CPT0013880003 Tumor 0.4
CPT0097600003 Normal 0.4
CPT0023310003 Tumor 0.4
CPT0011750003 Normal 0.4
CPT0091240003 Tumor 0.4
CPT0147380004 Tumor 0.4
CPT0148000003 Normal 0.4
CPT0063750003 Normal 0.4
CPT0069720003 Normal 0.4
CPT0051690004 Tumor 0.4
CPT0068100003 Tumor 0.4
CPT0063840003 Normal 0.3
CPT0082770003 Normal 0.3
CPT0052170004 Tumor 0.3
CPT0114010003 Normal 0.3
CPT0068610003 Tumor 0.3
CPT0023320003 Normal 0.3
CPT0114840003 Tumor 0.3
CPT0147980004 Tumor 0.3
CPT0063730003 Tumor 0.3
CPT0118570003 Tumor 0.3
CPT0118620003 Tumor 0.3
CPT0086320003 Normal 0.3
CPT0147500003 Normal 0.3
CPT0102450003 Tumor 0.3
CPT0067950003 Normal 0.3
CPT0115090003 Normal 0.3
CPT0014860003 Tumor 0.3
CPT0147880004 Tumor 0.2
CPT0118600003 Normal 0.2
CPT0113220003 Normal 0.2
CPT0109740004 Tumor 0.2
CPT0090700003 Tumor 0.2
CPT0111590003 Normal 0.2
CPT0066810003 Normal 0.2
CPT0067110003 Normal 0.2
CPT0013630003 Normal 0.2
CPT0109680004 Tumor 0.2
CPT0067290003 Normal 0.2
CPT0105710003 Tumor 0.2
CPT0148200003 Normal 0.2
CPT0148180004 Tumor 0.2
CPT0001580009 Tumor 0.2
CPT0068650003 Normal 0.2
CPT0146780004 Tumor 0.2
CPT0014930003 Normal 0.2
CPT0105060003 Tumor 0.2
CPT0092250003 Normal 0.2
CPT0091860003 Tumor 0.2
CPT0089360003 Normal 0.2
CPT0098130003 Tumor 0.1
CPT0109850003 Normal 0.1
CPT0104630003 Tumor 0.1
CPT0021490003 Normal 0.1
CPT0110980004 Tumor 0.1
CPT0083390004 Tumor 0.1
CPT0109720004 Tumor 0.1
CPT0068830003 Normal 0.1
CPT0147900003 Normal 0.1
CPT0112060003 Tumor 0.1
CPT0069370003 Normal 0.1
CPT0104650003 Normal 0.1
CPT0109830004 Tumor 0.1
CPT0104750003 Tumor 0.1
CPT0053040004 Tumor 0.1
CPT0084170003 Normal 0.1
CPT0067250003 Tumor 0.1
CPT0011910004 Tumor 0.1
CPT0109710003 Normal 0.1
CPT0146700003 Normal 0.1
CPT0118880003 Tumor 0.1
CPT0105510003 Tumor 0.1
CPT0069550003 Normal 0.1
CPT0091260003 Normal 0.1
CPT0147000003 Normal 0.1
CPT0001810003 Normal 0.1
CPT0000930003 Normal 0.0
CPT0083810003 Normal 0.0
CPT0105270003 Tumor 0.0
CPT0147480004 Tumor 0.0
CPT0111480003 Normal 0.0
CPT0105740003 Normal 0.0
CPT0079830003 Tumor 0.0
CPT0001970003 Normal 0.0
CPT0104760003 Normal 0.0
CPT0115070003 Tumor 0.0
CPT0015420003 Normal 0.0
CPT0106100003 Normal 0.0
CPT0066890003 Tumor 0.0
CPT0146600003 Normal 0.0
CPT0001380003 Tumor 0.0
CPT0105190003 Normal 0.0
CPT0106110003 Tumor 0.0
CPT0083100003 Tumor 0.0
CPT0105010004 Normal 0.0
CPT0014260003 Tumor 0.0
CPT0118240003 Normal 0.0
CPT0147580004 Tumor 0.0
CPT0118360003 Normal 0.0
CPT0114690003 Normal 0.0
CPT0105250003 Normal 0.0
CPT0001590003 Normal -0.1
CPT0063810003 Tumor -0.1
CPT0091870003 Normal -0.1
CPT0001660013 Tumor -0.1
CPT0148300003 Normal -0.1
CPT0105680003 Normal -0.1
CPT0068130003 Normal -0.1
CPT0109760003 Normal -0.1
CPT0084140003 Tumor -0.1
CPT0001070003 Normal -0.1
CPT0104970003 Tumor -0.1
CPT0001690003 Normal -0.1
CPT0114660004 Tumor -0.1
CPT0069520003 Tumor -0.1
CPT0147100003 Normal -0.1
CPT0069700003 Tumor -0.1
CPT0105630003 Tumor -0.1
CPT0117970003 Tumor -0.1
CPT0090340003 Tumor -0.1
CPT0112080003 Normal -0.1
CPT0147080004 Tumor -0.1
CPT0089340003 Tumor -0.2
CPT0001960003 Tumor -0.2
CPT0118650003 Normal -0.2
CPT0110890003 Normal -0.2
CPT0000920017 Tumor -0.2
CPT0008450003 Tumor -0.2
CPT0102480003 Normal -0.2
CPT0090720003 Normal -0.2
CPT0086310003 Tumor -0.2
CPT0147600003 Normal -0.2
CPT0062810003 Normal -0.2
CPT0105330003 Tumor -0.2
CPT0083420003 Normal -0.2
CPT0067620003 Tumor -0.2
CPT0097580003 Tumor -0.2
CPT0090860003 Tumor -0.2
CPT0083780003 Tumor -0.2
CPT0105370004 Normal -0.2
CPT0070060003 Tumor -0.2
CPT0146800003 Normal -0.2
CPT0118340003 Tumor -0.2
CPT0067470004 Normal -0.2
CPT0086770003 Normal -0.3
CPT0090900004 Normal -0.3
CPT0067770003 Normal -0.3
CPT0148100003 Normal -0.3
CPT0105600003 Tumor -0.3
CPT0068800003 Tumor -0.3
CPT0008410003 Tumor -0.3
CPT0109700003 Normal -0.3
CPT0090600003 Normal -0.3
CPT0001060010 Tumor -0.3
CPT0067070003 Tumor -0.3
CPT0118010003 Normal -0.3
CPT0092530003 Tumor -0.4
CPT0118890003 Normal -0.4
CPT0118200003 Tumor -0.4
CPT0118180003 Normal -0.4
CPT0113990003 Tumor -0.4
CPT0118810003 Tumor -0.4
CPT0092940003 Normal -0.4
CPT0090170004 Tumor -0.4
CPT0079850003 Normal -0.4
CPT0105940003 Tumor -0.4
CPT0090200003 Normal -0.4
CPT0090370003 Normal -0.4
CPT0105980003 Normal -0.4
CPT0067940003 Tumor -0.4
CPT0105610003 Normal -0.4
CPT0014290003 Normal -0.5
CPT0118160003 Tumor -0.5
CPT0114880003 Normal -0.5
CPT0146980004 Tumor -0.5
CPT0066930003 Normal -0.5
CPT0001800013 Tumor -0.5
CPT0148280004 Tumor -0.5
CPT0105550003 Normal -0.5
CPT0070080003 Normal -0.5
CPT0086750003 Tumor -0.5
CPT0092240003 Tumor -0.5
CPT0008420003 Normal -0.6
CPT0083140003 Normal -0.6
CPT0118830003 Normal -0.6
CPT0055100004 Tumor -0.6
CPT0066780003 Tumor -0.6
CPT0125830003 Normal -0.7
CPT0013910003 Normal -0.7
CPT0067450003 Tumor -0.7
CPT0090570004 Tumor -0.7
CPT0092930003 Tumor -0.8
CPT0105230003 Tumor -0.9
CPT0147400003 Normal -1.1
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0175410003 Normal 1.8
CPT0237780003 Normal 1.8
CPT0112730003 Normal 1.7
CPT0205000003 Normal 1.6
CPT0123370003 Normal 1.6
CPT0204990003 Tumor 1.5
CPT0175390003 Tumor 1.5
CPT0123350003 Tumor 1.4
CPT0223820003 Normal 1.1
CPT0112720003 Tumor 1.0
CPT0126470003 Normal 0.9
CPT0222740003 Normal 0.8
CPT0237760003 Tumor 0.8
CPT0202220004 Normal 0.8
CPT0147700003 Normal 0.8
CPT0202580004 Normal 0.8
CPT0091620003 Normal 0.7
CPT0202020008 Tumor 0.7
CPT0001030003 Normal 0.7
CPT0175160003 Normal 0.7
CPT0187380003 Normal 0.7
CPT0237990003 Normal 0.6
CPT0237710003 Normal 0.6
CPT0219390003 Normal 0.6
CPT0079110003 Normal 0.6
CPT0147200003 Normal 0.6
CPT0245840003 Normal 0.6
CPT0112540003 Tumor 0.5
CPT0112600003 Normal 0.5
CPT0207250003 Normal 0.5
CPT0079060003 Normal 0.5
CPT0227070003 Normal 0.5
CPT0068320003 Normal 0.5
CPT0063430003 Tumor 0.5
CPT0091090003 Normal 0.5
CPT0234820003 Normal 0.5
CPT0117770003 Normal 0.5
CPT0237430003 Normal 0.5
CPT0209040003 Normal 0.5
CPT0221660003 Normal 0.5
CPT0091820003 Tumor 0.4
CPT0218310003 Normal 0.4
CPT0237570003 Normal 0.4
CPT0237210003 Normal 0.4
CPT0112660003 Normal 0.4
CPT0237060004 Tumor 0.4
CPT0130440004 Normal 0.4
CPT0237080003 Normal 0.4
CPT0238130003 Normal 0.4
CPT0010060003 Normal 0.4
CPT0183270003 Normal 0.4
CPT0204660003 Normal 0.4
CPT0091050003 Tumor 0.4
CPT0186140003 Normal 0.4
CPT0111000004 Normal 0.4
CPT0191750003 Normal 0.4
CPT0130070003 Normal 0.4
CPT0202170003 Tumor 0.4
CPT0063440003 Normal 0.4
CPT0117720003 Tumor 0.3
CPT0104380003 Normal 0.3
CPT0208780003 Normal 0.3
CPT0221200003 Tumor 0.3
CPT0136660003 Normal 0.3
CPT0234580003 Normal 0.3
CPT0217490003 Normal 0.3
CPT0197520003 Normal 0.3
CPT0227400003 Tumor 0.3
CPT0197480003 Tumor 0.3
CPT0007760003 Normal 0.3
CPT0186180003 Tumor 0.3
CPT0232670003 Tumor 0.3
CPT0146500003 Normal 0.3
CPT0108600003 Normal 0.3
CPT0202740003 Normal 0.3
CPT0112580003 Tumor 0.3
CPT0091610003 Tumor 0.3
CPT0195520003 Normal 0.3
CPT0245780003 Tumor 0.3
CPT0234560003 Tumor 0.3
CPT0112550003 Normal 0.3
CPT0063500003 Normal 0.3
CPT0128900003 Normal 0.3
CPT0233640003 Normal 0.3
CPT0089880003 Tumor 0.3
CPT0197170003 Normal 0.3
CPT0191930003 Normal 0.3
CPT0227420003 Normal 0.3
CPT0023500003 Normal 0.3
CPT0225470003 Normal 0.3
CPT0197380003 Normal 0.2
CPT0236430003 Normal 0.2
CPT0232690003 Normal 0.2
CPT0104950003 Normal 0.2
CPT0191860003 Tumor 0.2
CPT0202040003 Normal 0.2
CPT0233160003 Normal 0.2
CPT0209510003 Normal 0.2
CPT0126760003 Normal 0.2
CPT0146400003 Normal 0.2
CPT0083990003 Normal 0.2
CPT0105430003 Normal 0.2
CPT0192590004 Normal 0.2
CPT0217420003 Tumor 0.2
CPT0098800003 Normal 0.2
CPT0147180004 Tumor 0.2
CPT0197860003 Normal 0.2
CPT0136640003 Tumor 0.2
CPT0196820003 Normal 0.2
CPT0245790003 Normal 0.1
CPT0191710003 Tumor 0.1
CPT0102840003 Normal 0.1
CPT0126740003 Tumor 0.1
CPT0197740003 Tumor 0.1
CPT0197210003 Tumor 0.1
CPT0105420003 Tumor 0.1
CPT0126450003 Tumor 0.1
CPT0221220003 Normal 0.1
CPT0187370003 Tumor 0.1
CPT0115860003 Normal 0.1
CPT0234950004 Normal 0.1
CPT0197100003 Normal 0.1
CPT0063480003 Tumor 0.1
CPT0130030003 Tumor 0.1
CPT0233320003 Tumor 0.0
CPT0130310003 Normal 0.0
CPT0202400004 Normal 0.0
CPT0175560003 Tumor 0.0
CPT0079100003 Tumor 0.0
CPT0175270003 Normal 0.0
CPT0112650003 Tumor 0.0
CPT0186210003 Normal 0.0
CPT0241210003 Normal 0.0
CPT0068280003 Tumor 0.0
CPT0233330003 Normal 0.0
CPT0128890003 Tumor 0.0
CPT0197090003 Tumor 0.0
CPT0225380003 Tumor 0.0
CPT0069890003 Tumor 0.0
CPT0087210003 Normal -0.1
CPT0108560003 Tumor -0.1
CPT0218280003 Tumor -0.1
CPT0130410003 Tumor -0.1
CPT0175260003 Tumor -0.1
CPT0126400003 Normal -0.1
CPT0146380004 Tumor -0.1
CPT0202720003 Tumor -0.1
CPT0069900003 Normal -0.2
CPT0010050003 Tumor -0.2
CPT0192540004 Tumor -0.2
CPT0090440003 Tumor -0.2
CPT0219360003 Tumor -0.2
CPT0104360003 Tumor -0.2
CPT0238110004 Tumor -0.2
CPT0086270003 Normal -0.2
CPT0236420003 Tumor -0.2
CPT0202530004 Tumor -0.3
CPT0086260003 Tumor -0.3
CPT0245880003 Tumor -0.3
CPT0245890003 Normal -0.3
CPT0234790003 Tumor -0.3
CPT0204600003 Tumor -0.3
CPT0233600003 Tumor -0.3
CPT0001020003 Tumor -0.3
CPT0197150003 Tumor -0.3
CPT0126810003 Tumor -0.3
CPT0190550003 Tumor -0.3
CPT0202350004 Tumor -0.3
CPT0126830003 Normal -0.3
CPT0234930004 Tumor -0.3
CPT0233120003 Tumor -0.3
CPT0079050003 Tumor -0.4
CPT0104930003 Tumor -0.4
CPT0237410004 Tumor -0.4
CPT0221650003 Tumor -0.4
CPT0209020004 Tumor -0.4
CPT0196810003 Tumor -0.4
CPT0237970004 Tumor -0.4
CPT0007740003 Tumor -0.4
CPT0208770003 Tumor -0.4
CPT0241170003 Tumor -0.4
CPT0098770003 Tumor -0.5
CPT0195510003 Tumor -0.5
CPT0023470003 Tumor -0.5
CPT0204820003 Normal -0.5
CPT0083980003 Tumor -0.5
CPT0207210003 Tumor -0.5
CPT0186130003 Tumor -0.5
CPT0126390003 Tumor -0.6
CPT0130270003 Tumor -0.6
CPT0064050003 Normal -0.6
CPT0146480004 Tumor -0.6
CPT0204800003 Tumor -0.6
CPT0245830003 Tumor -0.6
CPT0237690004 Tumor -0.6
CPT0102790003 Tumor -0.7
CPT0237550004 Tumor -0.7
CPT0223790003 Tumor -0.7
CPT0101130003 Tumor -0.8
CPT0115830003 Tumor -0.8
CPT0111150004 Tumor -0.8
CPT0175120003 Tumor -0.8
CPT0183250004 Tumor -0.9
CPT0126670003 Tumor -0.9
CPT0147680004 Tumor -1.0
CPT0064040003 Tumor -1.0
CPT0209490003 Tumor -1.1
CPT0222730003 Tumor -1.2
CPT0237200004 Tumor -1.2
CPT0227020003 Tumor -1.3
CPT0087190003 Tumor -1.3
CPT0126530003 Tumor -1.4
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody CAB033806
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

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