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ATP10A
HPA
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  • ATP10A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ATP10A
Synonyms ATP10C, ATPVA, ATPVC, KIAA0566
Gene descriptioni

Full gene name according to HGNC.

ATPase phospholipid transporting 10A (putative)
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q12
Chromosome location (bp) 25677273 - 25865184
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000206190 (version 109)
Entrez gene 57194
HGNC HGNC:13542
UniProt O60312 (UniProt - Evidence at protein level)
neXtProt NX_O60312
GeneCards ATP10A
Antibodypedia ATP10A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalytic component of P4-ATPase flippase complex, which catalyzes the hydrolysis of ATP coupled to the transport of phosphatidylcholine (PC) from the outer to the inner leaflet of the plasma membrane 1, 2, 3. Initiates inward plasma membrane bending and recruitment of Bin/amphiphysin/Rvs (BAR) domain-containing proteins involved in membrane tubulation and cell trafficking 4. Facilitates ITGB1/beta1 integrin endocytosis, delaying cell adhesion and cell spreading on extracellular matrix 5, 6. Has low flippase activity toward glucosylceramide (GlcCer) 7.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Translocase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Magnesium, Metal-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene belongs to the family of P-type cation transport ATPases, and to the subfamily of aminophospholipid-transporting ATPases. The aminophospholipid translocases transport phosphatidylserine and phosphatidylethanolamine from one side of a bilayer to another. This gene is maternally expressed. It maps within the most common interval of deletion responsible for Angelman syndrome, also known as 'happy puppet syndrome'. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ATP10A-201
ENSP00000349325
ENST00000356865
O60312
[Direct mapping] Phospholipid-transporting ATPase VA
Show all
Enzymes
   ENZYME proteins
Metabolic proteins
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005215 [transporter activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006869 [lipid transport]
GO:0008360 [regulation of cell shape]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034220 [ion transmembrane transport]
GO:0045332 [phospholipid translocation]
GO:0046872 [metal ion binding]
GO:0090554 [phosphatidylcholine floppase activity]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
GO:0140345 [phosphatidylcholine flippase activity]
GO:0140351 [glycosylceramide flippase activity]
GO:1903527 [positive regulation of membrane tubulation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
1499 aa
167.7 kDa
No >9
ATP10A-205
ENSP00000451615
ENST00000555756
H0YJI4
[Direct mapping] Phospholipid-transporting ATPase VA
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0045332 [phospholipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
137 aa
15.4 kDa
No 1
ATP10A-206
ENSP00000450480
ENST00000555815
O60312
[Direct mapping] Phospholipid-transporting ATPase VA
Show all
Enzymes
   ENZYME proteins
Metabolic proteins
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005215 [transporter activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006869 [lipid transport]
GO:0008360 [regulation of cell shape]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034220 [ion transmembrane transport]
GO:0045332 [phospholipid translocation]
GO:0046872 [metal ion binding]
GO:0090554 [phosphatidylcholine floppase activity]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
GO:0140345 [phosphatidylcholine flippase activity]
GO:0140351 [glycosylceramide flippase activity]
GO:1903527 [positive regulation of membrane tubulation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
1499 aa
167.7 kDa
No >9
ATP10A-207
ENSP00000480665
ENST00000619904
O60312
[Direct mapping] Phospholipid-transporting ATPase VA
Show all
Enzymes
   ENZYME proteins
Metabolic proteins
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006869 [lipid transport]
GO:0008360 [regulation of cell shape]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034220 [ion transmembrane transport]
GO:0045332 [phospholipid translocation]
GO:0046872 [metal ion binding]
GO:0090554 [phosphatidylcholine floppase activity]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
GO:0140345 [phosphatidylcholine flippase activity]
GO:0140351 [glycosylceramide flippase activity]
GO:1903527 [positive regulation of membrane tubulation]
GO:1990531 [phospholipid-translocating ATPase complex]
Show all
155 aa
17.6 kDa
No 3
ATP10A-212
ENSP00000501027
ENST00000673716
A0A669KAY1
[Direct mapping] Phospholipid-transporting ATPase
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005215 [transporter activity]
GO:0005524 [ATP binding]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034204 [lipid translocation]
GO:0045332 [phospholipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
495 aa
56.1 kDa
No 4
ATP10A-213
ENSP00000501230
ENST00000673747
A0A669KBE2
[Direct mapping] Phospholipid-transporting ATPase
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0000287 [magnesium ion binding]
GO:0005215 [transporter activity]
GO:0005524 [ATP binding]
GO:0015914 [phospholipid transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034204 [lipid translocation]
GO:0045332 [phospholipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
841 aa
94.5 kDa
No 5
ATP10A-214
ENSP00000500973
ENST00000673763
A0A669KAW0
[Direct mapping] Phospholipid-transporting ATPase VA
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005215 [transporter activity]
GO:0005524 [ATP binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATP hydrolysis activity]
GO:0034204 [lipid translocation]
GO:0045332 [phospholipid translocation]
GO:0140326 [ATPase-coupled intramembrane lipid transporter activity]
Show all
656 aa
73.6 kDa
No 2

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