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  • SUMMARY

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  • STRUCT & INT

  • IGLC1
CANCER STOMACH CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
STAD TCGA
Dictionary
Stomach cancer
Human cancer
Stomach adenocarcinoma
STOMACH ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

IGLC1 is not prognostic in Stomach Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 393.81
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 2071.0
Number of samples 346
Samples
Sample Description pTPM
TCGA-BR-6707-01A 75 years, male, white, stage:Stage IIA, dead, 605 days 19280.7
TCGA-VQ-A8PM-01A 56 years, male, white, stage:Stage IV, dead, 57 days 17621.0
TCGA-BR-8381-01A 51 years, male, white, stage:Stage IIB, alive, 224 days 14698.6
TCGA-CG-5732-01A 66 years, male, stage:Stage IV, dead, 2100 days 14039.1
TCGA-CD-8526-01A 73 years, female, asian, stage:Stage IIIA, alive, 381 days 13379.0
TCGA-BR-8366-01A 80 years, female, white, stage:Stage IIA, alive, 29 days 12944.6
TCGA-FP-A4BF-01A 68 years, male, white, stage:Stage IIIA, dead, 168 days 12221.8
TCGA-BR-A4J6-01A 69 years, female, white, stage:Stage IIA, alive, 20 days 12219.1
TCGA-BR-6709-01A 57 years, female, white, stage:Stage IIIB, dead, 370 days 11726.2
TCGA-CD-8525-01A 82 years, female, asian, stage:Stage IIIA, alive, 383 days 10775.8
TCGA-BR-8060-01A 75 years, female, white, stage:Stage IIB, dead, 348 days 9574.0
TCGA-FP-7916-01A 77 years, male, asian, stage:Stage IIIC, dead, 428 days 8899.3
TCGA-HU-A4GJ-01A 60 years, female, asian, stage:Stage IIIC, alive, 650 days 8870.0
TCGA-VQ-A8PF-01A 76 years, male, stage:Stage IIIB, dead, 76 days 8633.2
TCGA-RD-A8N0-01A 53 years, female, white, stage:Stage IIIB, alive, 1236 days 8549.6
TCGA-D7-8570-01A 44 years, male, white, stage:Stage IIIB, alive, 752 days 8250.1
TCGA-CG-5720-01A 71 years, male, stage:Stage IB, dead, 30 days 8135.2
TCGA-RD-A8MW-01A 72 years, male, white, stage:Stage IIIB, dead, 1153 days 7806.6
TCGA-VQ-A927-01A 81 years, male, white, stage:Stage IIIB, dead, 200 days 7643.4
TCGA-VQ-A8P8-01A 72 years, female, black or african american, stage:Stage IIB, alive, 942 days 7345.4
TCGA-VQ-A8PD-01A 69 years, male, white, stage:Stage IIIC, dead, 496 days 7261.4
TCGA-HU-8608-01A 70 years, male, asian, stage:Stage IIIB, alive, 641 days 7193.5
TCGA-BR-6563-01A 60 years, male, white, stage:Stage IIB, alive, 1190 days 7162.5
TCGA-HU-8604-01A 82 years, female, asian, stage:Stage IIA, alive, 694 days 7075.1
TCGA-RD-A8MV-01A 56 years, male, white, stage:Stage IIIB, alive, 3720 days 6959.5
TCGA-VQ-A91E-01A 67 years, female, white, stage:Stage IIIB, alive, 664 days 6954.8
TCGA-CD-8529-01A 65 years, male, asian, stage:Stage IV, alive, 374 days 6682.8
TCGA-HF-7134-01A male, stage:Stage IA, alive, 1588 days 6633.3
TCGA-BR-6565-01A 67 years, male, white, stage:Stage IIB, dead, 279 days 6424.2
TCGA-IN-A6RS-01A 76 years, male, white, stage:Stage IA, alive, 383 days 6323.9
TCGA-RD-A7BS-01A 46 years, male, white, stage:Stage IIIA, dead, 336 days 6008.4
TCGA-D7-6522-01A 58 years, male, white, stage:Stage IB, alive, 566 days 5867.5
TCGA-BR-7196-01A 64 years, male, white, stage:Stage IV, alive, 666 days 5861.8
TCGA-BR-4279-01A 43 years, male, white, stage:Stage II, dead, 291 days 5856.1
TCGA-HU-A4HB-01A 68 years, male, asian, stage:Stage IIB, dead, 477 days 5700.9
TCGA-VQ-AA6F-01A 57 years, male, white, stage:Stage IIB, alive, 1646 days 5638.8
TCGA-CD-5801-01A 69 years, male, asian, stage:Stage IIIA, dead, 401 days 5596.8
TCGA-FP-7998-01A 77 years, male, white, stage:Stage IIIC, alive, 678 days 5417.9
TCGA-RD-A8N9-01A 63 years, female, asian, stage:Stage II, alive, 1083 days 5350.5
TCGA-CG-5734-01A 68 years, male, stage:Stage IIIA, dead, 243 days 5100.2
TCGA-D7-5578-01A 80 years, male, white, stage:Stage IIIA, alive, 385 days 5077.6
TCGA-CD-8532-01A 52 years, male, asian, stage:Stage II, dead, 354 days 4723.6
TCGA-VQ-A8PC-01A 65 years, male, white, stage:Stage IIIA, dead, 1407 days 4605.6
TCGA-D7-A6EY-01A 72 years, female, white, stage:Stage IIIB, dead, 348 days 4593.7
TCGA-CG-5722-01A 67 years, female, stage:Stage IV, alive, 30 days 4536.8
TCGA-D7-8574-01A 72 years, male, white, stage:Stage IIIA, alive, 523 days 4504.9
TCGA-BR-6457-01A 69 years, male, white, stage:Stage IIA, alive, 416 days 4501.6
TCGA-BR-7851-01A 74 years, male, white, stage:Stage IIB, dead, 574 days 4385.2
TCGA-CD-5813-01A 60 years, male, asian, stage:Stage II, dead, 377 days 4274.2
TCGA-CG-5718-01A 78 years, female, stage:Stage II, dead, 1095 days 4206.8
TCGA-VQ-AA6K-01A 59 years, male, white, stage:Stage IIIC, dead, 378 days 4187.6
TCGA-BR-8686-01A 69 years, male, asian, stage:Stage IIIB, dead, 635 days 4146.5
TCGA-BR-6705-01A 68 years, female, white, stage:Stage IIIB, dead, 779 days 4133.9
TCGA-HU-A4H6-01A 72 years, female, asian, stage:Stage IIIA, alive, 644 days 4097.7
TCGA-CG-5723-01A 83 years, male, stage:Stage II, alive, 2496 days 3902.9
TCGA-BR-7716-01A 62 years, female, white, stage:Stage IIB, alive, 1210 days 3827.5
TCGA-BR-4256-01A 80 years, male, white, stage:'--, dead, 284 days 3793.7
TCGA-BR-8484-01A 61 years, male, white, stage:Stage IIIA, dead, 766 days 3715.4
TCGA-F1-A72C-01A 68 years, male, asian, stage:Stage IIA, alive, 346 days 3634.7
TCGA-IN-A6RL-01A 84 years, male, white, stage:'--, dead, 406 days 3583.5
TCGA-BR-6803-01A 54 years, female, white, stage:Stage IIA, alive, 949 days 3577.5
TCGA-HF-7132-01A male, stage:Stage II, alive, 2351 days 3486.7
TCGA-BR-8591-01A 79 years, male, white, stage:Stage IIIC, alive, 856 days 3396.1
TCGA-D7-8575-01A 75 years, male, white, stage:Stage IIIA, dead, 554 days 3370.7
TCGA-VQ-A8PX-01A 51 years, male, stage:Stage IA, alive, 1964 days 3354.6
TCGA-ZQ-A9CR-01A 79 years, female, white, stage:Stage IIIC, dead, 24 days 3354.4
TCGA-IN-AB1X-01A 78 years, female, white, stage:Stage IIA, alive, 411 days 3348.9
TCGA-MX-A666-01A 61 years, male, white, stage:Stage IIA, alive, 427 days 3301.4
TCGA-BR-8365-01A 70 years, female, white, stage:Stage IIA, dead, 533 days 3295.8
TCGA-VQ-A91N-01A 59 years, female, stage:Stage IV, dead, 570 days 3250.6
TCGA-D7-6527-01A 62 years, male, white, stage:Stage II, dead, 312 days 3183.3
TCGA-BR-8590-01A 62 years, male, white, stage:Stage IIIC, dead, 284 days 3176.7
TCGA-CD-A4MH-01A 86 years, female, asian, stage:Stage IIA, alive, 371 days 3057.4
TCGA-BR-8058-01A 53 years, female, white, stage:Stage IIIB, alive, 1133 days 3055.7
TCGA-BR-4253-01A 80 years, female, white, stage:Stage IIIA, dead, 124 days 3049.7
TCGA-CG-4437-01A 83 years, male, stage:Stage II, alive, 245 days 3021.6
TCGA-RD-A8N1-01A 70 years, male, white, stage:Stage IIIB, alive, 3519 days 2954.2
TCGA-FP-A8CX-01A 60 years, male, white, stage:Stage IIIC, alive, 7 days 2952.4
TCGA-BR-8485-01A 68 years, female, white, stage:Stage IIIC, alive, 280 days 2881.4
TCGA-CG-4306-01A 90 years, male, stage:Stage IV, dead, 1 days 2867.3
TCGA-BR-6852-01A 64 years, female, white, stage:Stage IIA, alive, 1367 days 2830.1
TCGA-RD-A7C1-01A 82 years, male, white, stage:Stage IB, dead, 507 days 2828.5
TCGA-BR-8690-01A 54 years, female, white, stage:Stage IIIB, alive, 325 days 2777.9
TCGA-IN-7808-01A 59 years, male, white, stage:'--, dead, 105 days 2770.9
TCGA-VQ-A91U-01A 78 years, male, asian, stage:Stage IIIA, dead, 52 days 2765.2
TCGA-MX-A5UG-01A 78 years, male, asian, stage:Stage IIIA, dead, 113 days 2764.1
TCGA-F1-A448-01A 70 years, male, white, stage:Stage IIIB, alive, 647 days 2753.6
TCGA-BR-7704-01A 69 years, female, white, stage:Stage II, alive, 1072 days 2746.6
TCGA-D7-6521-01A 65 years, male, white, stage:'--, alive, 564 days 2733.8
TCGA-D7-A4YU-01A 73 years, male, white, stage:Stage IIIB, alive, 500 days 2696.1
TCGA-BR-8284-01A 72 years, female, white, stage:Stage IIIC, dead, 245 days 2651.8
TCGA-VQ-A91A-01A 67 years, male, white, stage:Stage IIIB, alive, 1200 days 2622.8
TCGA-VQ-A8PB-01A 65 years, female, white, stage:Stage II, dead, 1043 days 2554.5
TCGA-BR-8080-01A 72 years, female, white, stage:Stage IIIC, dead, 292 days 2552.7
TCGA-BR-6710-01A 41 years, male, white, stage:Stage IB, alive, 273 days 2548.8
TCGA-R5-A7ZR-01A 70 years, female, black or african american, stage:Stage III, dead, 185 days 2512.7
TCGA-BR-8296-01A 58 years, female, white, stage:Stage IIIC, dead, 474 days 2407.8
TCGA-BR-8081-01A 71 years, female, white, stage:Stage IIB, alive, 981 days 2407.4
TCGA-IN-A6RR-01A 84 years, male, white, stage:'--, dead, 205 days 2370.7
TCGA-FP-8210-01A 48 years, male, asian, stage:Stage IIIA, dead, 153 days 2360.3
TCGA-BR-6453-01A 54 years, male, white, stage:Stage IIA, alive, 485 days 2353.1
TCGA-BR-A4J7-01A 49 years, male, asian, stage:Stage IIB, alive, 989 days 2339.3
TCGA-HU-A4H2-01A 58 years, female, asian, stage:Stage IIIB, alive, 394 days 2295.2
TCGA-BR-6566-01A 64 years, female, white, stage:Stage IIA, alive, 997 days 2260.8
TCGA-BR-7723-01A 59 years, male, white, stage:Stage IIIB, dead, 874 days 2254.0
TCGA-CG-4477-01A 58 years, female, stage:Stage IB, alive, 942 days 2253.0
TCGA-RD-A8N4-01A 58 years, female, white, stage:Stage IIIA, alive, 2171 days 2202.1
TCGA-B7-A5TK-01A 51 years, male, white, stage:Stage IIIA, alive, 288 days 2171.0
TCGA-VQ-A8PH-01A 62 years, male, white, stage:Stage IIIB, dead, 389 days 2135.7
TCGA-SW-A7EB-01A 45 years, male, white, stage:Stage IIIA, alive, 176 days 2096.9
TCGA-D7-8572-01A 57 years, male, white, stage:Stage IIB, alive, 511 days 2072.6
TCGA-BR-A4J9-01A 55 years, male, white, stage:Stage IIA, alive, 14 days 2037.5
TCGA-KB-A6F7-01A 54 years, female, stage:Stage IB, alive, 1935 days 1971.4
TCGA-D7-8576-01A 54 years, female, white, stage:Stage IIIB, dead, 446 days 1962.7
TCGA-R5-A7O7-01A 51 years, male, white, stage:Stage IV, alive, 1389 days 1913.9
TCGA-BR-4191-01A 72 years, male, white, stage:'--, dead, 558 days 1907.4
TCGA-VQ-AA6J-01A 75 years, male, black or african american, stage:Stage IIIB, alive, 838 days 1886.7
TCGA-KB-A93J-01A 78 years, male, white, stage:Stage II, alive, 1124 days 1818.8
TCGA-VQ-A8PE-01A 78 years, male, white, stage:Stage IIIB, dead, 675 days 1789.7
TCGA-BR-6452-01A 78 years, female, white, stage:Stage IIA, alive, 1055 days 1769.0
TCGA-BR-6802-01A 65 years, male, white, stage:Stage IIIA, alive, 940 days 1764.3
TCGA-CG-5721-01A 58 years, male, stage:Stage IV, alive, 183 days 1757.8
TCGA-BR-8592-01A 63 years, female, white, stage:Stage IIIB, dead, 191 days 1743.7
TCGA-CG-4460-01A 66 years, female, stage:Stage IV, dead, 669 days 1648.8
TCGA-CD-8524-01A 61 years, female, asian, stage:Stage II, alive, 388 days 1634.3
TCGA-BR-4201-01A 66 years, female, white, stage:'--, dead, 940 days 1622.3
TCGA-HU-A4GT-01A 71 years, female, asian, stage:Stage IIA, alive, 198 days 1594.4
TCGA-CG-4441-01A 83 years, male, stage:Stage IIIA, dead, 426 days 1568.3
TCGA-BR-7958-01A 60 years, male, white, stage:Stage IIIB, alive, 899 days 1545.8
TCGA-D7-A6F2-01A 62 years, male, white, stage:Stage IB, alive, 476 days 1489.0
TCGA-BR-8382-01A 67 years, female, white, stage:Stage IIIC, dead, 762 days 1480.8
TCGA-BR-8589-01A 56 years, male, white, stage:Stage IIIB, alive, 825 days 1465.2
TCGA-BR-7707-01A 69 years, female, white, stage:Stage IB, alive, 1090 days 1437.2
TCGA-BR-8368-01A 84 years, female, white, stage:Stage IB, alive, 131 days 1431.7
TCGA-R5-A7ZI-01A 44 years, female, white, stage:Stage IV, alive, 2267 days 1344.1
TCGA-HU-A4GC-01A 74 years, male, asian, stage:Stage IIIB, alive, 99 days 1335.2
TCGA-BR-A4IV-01A 47 years, male, asian, stage:Stage IIIB, dead, 869 days 1330.3
TCGA-HU-A4GX-01A 70 years, female, asian, stage:Stage IIIC, alive, 616 days 1299.8
TCGA-BR-8059-01A 72 years, male, white, stage:Stage III, dead, 439 days 1293.2
TCGA-D7-8578-01A 72 years, male, white, stage:Stage IB, alive, 643 days 1286.7
TCGA-CG-4444-01A 76 years, male, stage:Stage IIIA, alive, 1431 days 1264.2
TCGA-BR-A4J5-01A 56 years, male, asian, stage:Stage IIIA, alive, 862 days 1254.8
TCGA-BR-8077-01A 58 years, female, white, stage:Stage IIIB, alive, 21 days 1250.9
TCGA-B7-A5TI-01A 52 years, male, white, stage:Stage IIIC, alive, 595 days 1201.2
TCGA-CD-A48C-01A 79 years, female, asian, stage:Stage IIB, dead, 353 days 1188.8
TCGA-BR-6455-01A 59 years, male, white, stage:Stage IIB, dead, 422 days 1182.1
TCGA-FP-8631-01A 68 years, male, white, stage:Stage IIIA, alive, 17 days 1172.5
TCGA-D7-A6EV-01A 71 years, female, white, stage:Stage IIB, alive, 342 days 1170.1
TCGA-BR-8384-01A 69 years, male, white, stage:Stage IIIC, alive, 113 days 1155.4
TCGA-BR-8361-01A 71 years, female, white, stage:Stage IIIC, alive, 946 days 1125.4
TCGA-D7-8579-01A 66 years, female, white, stage:Stage IIB, alive, 636 days 1118.3
TCGA-CD-A487-01A 51 years, male, asian, stage:Stage IIB, alive, 374 days 1112.2
TCGA-HU-A4G8-01A 71 years, female, asian, stage:Stage IIB, alive, 690 days 1102.3
TCGA-VQ-A8PO-01A 74 years, male, white, stage:Stage IIB, dead, 282 days 1100.3
TCGA-HU-A4H0-01A 72 years, male, asian, stage:Stage IIIC, alive, 64 days 1097.6
TCGA-BR-8364-01A 42 years, female, white, stage:Stage IIIC, alive, 675 days 1097.5
TCGA-D7-8573-01A 57 years, male, white, stage:Stage IIA, alive, 593 days 1088.4
TCGA-VQ-A8PK-01A 58 years, male, white, stage:Stage IIIB, dead, 543 days 1073.1
TCGA-CD-8533-01A 48 years, male, asian, stage:Stage II, alive, 468 days 1067.2
TCGA-BR-4267-01A 51 years, male, white, stage:Stage IB, dead, 188 days 1060.8
TCGA-CD-8531-01A 66 years, female, asian, stage:Stage IIIA, alive, 383 days 1047.9
TCGA-BR-8677-01A 74 years, female, white, stage:Stage IIIB, alive, 813 days 1012.4
TCGA-FP-8099-01A 79 years, male, white, stage:Stage IIA, alive, 519 days 1005.1
TCGA-SW-A7EA-01A 61 years, female, white, stage:Stage IB, alive, 579 days 983.9
TCGA-IN-A7NU-01A 69 years, male, white, stage:Stage IIIB, alive, 356 days 978.4
TCGA-VQ-A8PQ-01A 50 years, female, white, stage:Stage IV, dead, 476 days 950.9
TCGA-BR-4280-01A 78 years, female, white, stage:Stage III, dead, 201 days 938.6
TCGA-D7-6815-01A 70 years, female, white, stage:Stage IIB, alive, 486 days 922.2
TCGA-VQ-A94P-01A 57 years, male, white, stage:'--, dead, 81 days 921.7
TCGA-IN-8462-01A 80 years, male, white, stage:Stage IIB, alive, 572 days 910.6
TCGA-B7-A5TN-01A 60 years, male, white, stage:Stage IIB, alive, 287 days 884.7
TCGA-HU-8238-01A 56 years, male, asian, stage:'--, alive, 46 days 879.3
TCGA-D7-6520-01A 53 years, male, white, stage:Stage IIIA, alive, 573 days 875.9
TCGA-VQ-A8E3-01A 79 years, male, white, stage:Stage IIA, dead, 661 days 871.9
TCGA-FP-7735-01A 77 years, male, black or african american, stage:Stage IB, dead, 106 days 818.9
TCGA-HJ-7597-01A 71 years, female, white, stage:Stage IB, dead, 805 days 814.4
TCGA-VQ-A8DT-01A 43 years, male, stage:Stage IIIB, alive, 1484 days 798.2
TCGA-VQ-A91Y-01A 67 years, male, white, stage:Stage IIIC, dead, 296 days 793.8
TCGA-FP-8211-01A 62 years, male, white, stage:Stage IIB, alive, 413 days 777.3
TCGA-CD-A4MG-01A 76 years, male, asian, stage:Stage IIA, dead, 200 days 768.9
TCGA-VQ-A8P5-01A 67 years, male, white, stage:Stage IIA, dead, 235 days 767.9
TCGA-BR-A4PF-01A 72 years, male, white, stage:Stage IIIB, alive, 35 days 765.5
TCGA-VQ-A8PP-01A 76 years, male, stage:Stage IV, dead, 712 days 761.0
TCGA-CG-5717-01A 58 years, male, stage:Stage II, dead, 212 days 758.6
TCGA-VQ-A928-01A 49 years, male, white, stage:Stage IV, dead, 174 days 751.4
TCGA-BR-4187-01A 56 years, male, white, stage:'--, dead, 141 days 747.2
TCGA-BR-7901-01A 74 years, male, white, stage:Stage IIB, dead, 105 days 742.2
TCGA-CG-4305-01A 69 years, male, stage:Stage II, alive, 485 days 740.1
TCGA-VQ-A94R-01A 63 years, male, white, stage:'--, dead, 1294 days 731.8
TCGA-HU-A4H4-01A 53 years, female, asian, stage:Stage IIB, alive, 725 days 725.3
TCGA-HU-A4GY-01A 76 years, female, asian, stage:Stage IIIA, alive, 8 days 725.1
TCGA-D7-A6EX-01A 72 years, female, white, stage:Stage IIIA, alive, 344 days 721.0
TCGA-B7-5818-01A 62 years, male, white, stage:Stage IB, alive, 356 days 719.8
TCGA-BR-8297-01A 58 years, male, white, stage:Stage IIIC, alive, 225 days 718.9
TCGA-BR-7717-01A 63 years, male, white, stage:Stage IV, dead, 552 days 706.3
TCGA-IN-AB1V-01A 63 years, male, white, stage:Stage IA, alive, 479 days 705.9
TCGA-CD-8527-01A 72 years, female, asian, stage:Stage II, dead, 218 days 705.8
TCGA-IN-A7NR-01A 64 years, female, white, stage:Stage IV, alive, 198 days 701.5
TCGA-D7-5577-01A 53 years, female, white, stage:Stage IIIA, dead, 782 days 687.8
TCGA-CD-A486-01A 68 years, male, asian, stage:Stage IIA, dead, 192 days 683.8
TCGA-BR-8483-01A 59 years, male, white, stage:Stage IIIA, alive, 164 days 669.9
TCGA-BR-6458-01A 57 years, female, white, stage:Stage IIB, dead, 588 days 661.9
TCGA-MX-A5UJ-01A 86 years, female, white, stage:Stage IIIA, alive, 600 days 655.3
TCGA-BR-6456-01A 74 years, female, white, stage:Stage IIB, dead, 526 days 644.5
TCGA-BR-8289-01A 57 years, male, white, stage:Stage IV, dead, 81 days 632.6
TCGA-VQ-A8DZ-01A 70 years, male, black or african american, stage:Stage IV, dead, 396 days 629.5
TCGA-BR-6564-01A 46 years, female, white, stage:Stage IIIA, dead, 794 days 627.0
TCGA-CD-8534-01A 41 years, male, asian, stage:Stage II, alive, 367 days 619.1
TCGA-RD-A8NB-01A 80 years, female, white, stage:Stage IIIA, dead, 513 days 617.2
TCGA-BR-8369-01A 76 years, female, white, stage:Stage IIIB, alive, 427 days 614.1
TCGA-VQ-AA6A-01A 56 years, male, white, stage:Stage IIIC, alive, 1184 days 604.8
TCGA-VQ-A94O-01A 74 years, male, black or african american, stage:Stage IIIC, dead, 640 days 600.8
TCGA-BR-8487-01A 64 years, female, white, stage:Stage IIA, alive, 34 days 600.0
TCGA-BR-A4J8-01A 71 years, female, white, stage:Stage IIIB, alive, 411 days 593.0
TCGA-VQ-A91X-01A 74 years, male, white, stage:Stage IIIB, dead, 289 days 586.1
TCGA-VQ-A8DU-01A 63 years, male, white, stage:Stage IIIA, dead, 166 days 551.1
TCGA-D7-A6F0-01A 79 years, female, white, stage:Stage IB, alive, 678 days 533.4
TCGA-HF-7133-01A female, stage:Stage IV, alive, 1918 days 533.3
TCGA-BR-8380-01A 55 years, male, white, stage:Stage IIIC, dead, 21 days 533.1
TCGA-VQ-A8E2-01A 57 years, male, asian, stage:Stage IIIB, alive, 1319 days 517.7
TCGA-CD-8530-01A 51 years, male, asian, stage:Stage II, alive, 377 days 493.7
TCGA-IN-A6RN-01A 72 years, female, white, stage:Stage IIA, alive, 594 days 490.5
TCGA-BR-8372-01A 63 years, male, white, stage:Stage IIIC, alive, 951 days 485.4
TCGA-BR-8588-01A 55 years, female, white, stage:Stage IIB, alive, 389 days 484.3
TCGA-VQ-A91Q-01A 61 years, male, stage:Stage IV, dead, 633 days 473.5
TCGA-BR-8295-01A 60 years, female, white, stage:Stage IIB, dead, 67 days 468.0
TCGA-RD-A7BT-01A 66 years, male, native hawaiian or other pacific islander, stage:Stage IV, dead, 262 days 466.8
TCGA-BR-8373-01A 65 years, female, white, stage:Stage IIIA, alive, 450 days 460.4
TCGA-VQ-A91K-01A 69 years, male, white, stage:Stage IIIA, alive, 1862 days 448.0
TCGA-BR-7722-01A 62 years, male, white, stage:Stage IIB, dead, 466 days 445.7
TCGA-D7-6525-01A 58 years, male, white, stage:Stage IIIA, dead, 406 days 439.7
TCGA-VQ-A925-01A 66 years, male, white, stage:Stage IIIA, dead, 138 days 437.6
TCGA-CD-5798-01A 82 years, male, asian, stage:Stage II, alive, 408 days 429.7
TCGA-HU-A4H3-01A 56 years, female, asian, stage:Stage IIIC, alive, 882 days 425.4
TCGA-R5-A805-01A 71 years, male, white, stage:Stage IIIB, dead, 281 days 416.1
TCGA-HU-A4GD-01A 56 years, male, asian, stage:Stage IIB, alive, 692 days 415.7
TCGA-VQ-A922-01A 70 years, male, stage:Stage IV, dead, 275 days 409.2
TCGA-CD-A48A-01A 57 years, male, asian, stage:Stage IIA, alive, 378 days 396.9
TCGA-CG-5724-01A 59 years, male, stage:Stage IV, dead, 366 days 396.4
TCGA-BR-8367-01A 55 years, male, white, stage:Stage IIIB, dead, 801 days 394.9
TCGA-CD-5800-01A 51 years, female, asian, stage:Stage II, alive, 400 days 392.8
TCGA-BR-A44T-01A 53 years, female, white, stage:Stage IIA, alive, 1038 days 391.3
TCGA-CG-4301-01A 75 years, female, stage:Stage IV, alive, 92 days 388.1
TCGA-D7-A4YX-01A 63 years, male, white, stage:Stage IIB, alive, 1108 days 383.6
TCGA-CD-5799-01A 45 years, male, asian, stage:Stage II, alive, 396 days 382.1
TCGA-D7-6526-01A 67 years, female, white, stage:Stage IIIA, alive, 523 days 374.9
TCGA-HU-A4GH-01A 75 years, male, asian, stage:Stage IA, alive, 358 days 368.3
TCGA-D7-A4Z0-01A 60 years, female, white, stage:Stage IIB, alive, 449 days 367.8
TCGA-BR-8676-01A 59 years, male, white, stage:Stage IIIB, alive, 229 days 367.0
TCGA-VQ-AA64-01A 68 years, male, white, stage:Stage IIIB, dead, 560 days 360.9
TCGA-HU-A4GQ-01A 71 years, male, asian, stage:Stage IIIC, dead, 3 days 355.4
TCGA-HU-A4HD-01A 73 years, male, asian, stage:Stage IIIA, alive, 1016 days 352.6
TCGA-FP-A9TM-01A 77 years, male, white, stage:'--, alive, 189 days 352.0
TCGA-HU-8249-01A 76 years, male, asian, stage:Stage IIIA, alive, 881 days 349.4
TCGA-VQ-AA6G-01A 68 years, male, white, stage:Stage IIA, dead, 792 days 335.0
TCGA-BR-7959-01A 59 years, male, white, stage:Stage IIIA, alive, 1010 days 333.7
TCGA-CG-4438-01A 56 years, male, stage:Stage IV, alive, 1645 days 332.7
TCGA-CG-4436-01A 57 years, male, stage:Stage IB, alive, 243 days 331.8
TCGA-VQ-A94U-01A 70 years, male, white, stage:Stage IIB, alive, 819 days 321.5
TCGA-BR-8682-01A 52 years, male, asian, stage:Stage IIB, alive, 991 days 309.4
TCGA-VQ-A8PJ-01A 53 years, male, stage:Stage IV, dead, 82 days 305.9
TCGA-HU-8602-01A 58 years, female, asian, stage:Stage IIB, alive, 679 days 304.2
TCGA-CD-5803-01A 78 years, female, asian, stage:Stage II, dead, 341 days 299.8
TCGA-CD-A489-01A 58 years, male, asian, stage:Stage IIA, dead, 344 days 289.1
TCGA-BR-8291-01A 61 years, male, white, stage:Stage IIB, dead, 607 days 285.6
TCGA-HU-A4H5-01A 71 years, male, asian, stage:Stage IB, alive, 724 days 283.9
TCGA-IN-A6RJ-01A 64 years, male, white, stage:Stage IA, alive, 379 days 283.4
TCGA-D7-6818-01A 53 years, male, white, stage:Stage IIIA, dead, 376 days 279.5
TCGA-BR-7957-01A 50 years, female, white, stage:Stage IV, dead, 276 days 270.6
TCGA-B7-A5TJ-01A 74 years, male, white, stage:Stage IIB, alive, 335 days 268.4
TCGA-BR-8687-01A 67 years, female, white, stage:Stage IIIC, dead, 250 days 261.1
TCGA-MX-A663-01A 66 years, male, white, stage:Stage IIA, dead, 300 days 252.0
TCGA-HU-A4G3-01A 54 years, male, asian, stage:Stage IIB, alive, 170 days 247.7
TCGA-IN-A7NT-01A 73 years, female, white, stage:Stage IIB, alive, 323 days 240.6
TCGA-CG-5719-01A 54 years, female, stage:Stage IV, alive, 31 days 239.5
TCGA-D7-6528-01A 70 years, female, white, stage:Stage IB, alive, 463 days 232.8
TCGA-HU-A4GP-01A 62 years, female, asian, stage:Stage IIA, alive, 273 days 232.3
TCGA-HU-8610-01A 75 years, male, asian, stage:Stage IA, alive, 23 days 232.2
TCGA-BR-4257-01A 79 years, female, white, stage:'--, dead, 294 days 230.9
TCGA-VQ-A8E0-01A 68 years, male, black or african american, stage:Stage IIIA, dead, 562 days 229.7
TCGA-BR-8678-01A 76 years, male, white, stage:Stage IB, alive, 754 days 229.2
TCGA-BR-A4J4-01A 39 years, male, asian, stage:Stage IIIB, alive, 16 days 227.2
TCGA-CG-5726-01A 73 years, male, stage:Stage IA, dead, 881 days 220.8
TCGA-VQ-A92D-01A 67 years, male, white, stage:Stage IB, alive, 2032 days 218.3
TCGA-VQ-AA6D-01A 52 years, female, stage:Stage IIIA, alive, 521 days 214.3
TCGA-D7-A748-01A 41 years, female, white, stage:Stage IV, dead, 132 days 214.0
TCGA-D7-6524-01A 53 years, male, white, stage:Stage II, alive, 543 days 212.5
TCGA-CG-4475-01A 76 years, male, stage:Stage IIB, alive, 699 days 205.2
TCGA-BR-7197-01A 69 years, male, white, stage:Stage II, alive, 280 days 204.9
TCGA-FP-7829-01A 69 years, male, white, stage:Stage IIB, alive, 594 days 203.5
TCGA-D7-A747-01A 57 years, male, white, stage:Stage IIB, dead, 255 days 202.1
TCGA-RD-A8N5-01A 78 years, male, white, stage:Stage IIIA, dead, 1747 days 194.0
TCGA-HU-A4GF-01A 69 years, male, asian, stage:Stage IIA, alive, 785 days 191.7
TCGA-ZA-A8F6-01A 71 years, male, white, stage:Stage IB, alive, 525 days 186.2
TCGA-D7-A6EZ-01A 66 years, male, white, stage:Stage IIIA, dead, 618 days 185.6
TCGA-VQ-A94T-01A 73 years, male, stage:Stage IIIB, dead, 342 days 181.5
TCGA-D7-A74A-01A 61 years, female, white, stage:Stage IIIA, alive, 607 days 180.6
TCGA-BR-A4QL-01A 75 years, female, white, stage:Stage IIIB, dead, 491 days 166.9
TCGA-HU-A4G2-01A 45 years, male, asian, stage:Stage IIB, alive, 739 days 166.3
TCGA-VQ-A8P3-01A 72 years, male, white, stage:Stage IIIA, alive, 1132 days 161.7
TCGA-IN-7806-01A 50 years, male, white, stage:Stage IIB, alive, 1106 days 161.2
TCGA-RD-A7BW-01A 68 years, female, white, stage:Stage IB, dead, 156 days 157.5
TCGA-VQ-AA68-01A 52 years, female, white, stage:Stage IIIC, alive, 1328 days 157.0
TCGA-IP-7968-01A 74 years, male, white, stage:Stage IIIB, alive, 77 days 145.1
TCGA-CG-4465-01A 69 years, female, stage:Stage IV, dead, 274 days 137.8
TCGA-KB-A93G-01A 68 years, male, white, stage:Stage IB, alive, 613 days 136.5
TCGA-CG-5725-01A 72 years, male, stage:Stage IB, dead, 457 days 136.2
TCGA-FP-8209-01A 49 years, male, white, stage:Stage IB, dead, 1811 days 134.6
TCGA-BR-A4CS-01A 77 years, male, white, stage:Stage IIIC, dead, 45 days 134.2
TCGA-IN-A6RI-01A 45 years, male, white, stage:Stage I, alive, 559 days 130.7
TCGA-CG-4466-01A 81 years, female, stage:Stage IB, alive, 577 days 121.7
TCGA-D7-6822-01A 77 years, male, white, stage:Stage IB, alive, 375 days 116.5
TCGA-EQ-8122-01A 71 years, female, white, stage:Stage IIB, dead, 243 days 108.4
TCGA-VQ-A8DV-01A 48 years, male, white, stage:Stage IB, dead, 403 days 106.9
TCGA-BR-7715-01A 65 years, male, white, stage:Stage IIA, alive, 1023 days 106.7
TCGA-VQ-A91V-01A 58 years, male, stage:Stage IIIA, alive, 1297 days 106.4
TCGA-CD-8528-01A 43 years, female, asian, stage:Stage IIIA, alive, 375 days 105.2
TCGA-BR-8683-01A 75 years, male, asian, stage:Stage IIIB, dead, 300 days 103.1
TCGA-VQ-A924-01A 69 years, male, stage:Stage II, dead, 1686 days 98.4
TCGA-VQ-A91S-01A 63 years, male, black or african american, stage:Stage IIIB, alive, 1000 days 97.5
TCGA-BR-8371-01A 62 years, male, white, stage:Stage IIIB, dead, 359 days 96.9
TCGA-BR-8286-01A 49 years, male, white, stage:Stage II, alive, 895 days 90.2
TCGA-BR-8680-01A 45 years, male, asian, stage:Stage IV, alive, 972 days 86.6
TCGA-HU-A4G9-01A 67 years, female, asian, stage:Stage IA, alive, 736 days 85.3
TCGA-F1-6874-01A 79 years, male, white, stage:Stage IB, alive, 440 days 82.5
TCGA-VQ-AA69-01A 35 years, male, white, stage:Stage IIIA, alive, 864 days 76.0
TCGA-BR-A44U-01A 70 years, male, white, stage:Stage IIIB, dead, 422 days 68.6
TCGA-R5-A7ZF-01A 65 years, female, black or african american, stage:Stage IV, dead, 259 days 68.1
TCGA-VQ-A8P2-01A 68 years, male, white, stage:Stage IIIA, alive, 1160 days 60.0
TCGA-3M-AB46-01A 70 years, male, white, stage:Stage IB, alive, 1765 days 53.6
TCGA-VQ-A8PU-01A 72 years, female, white, stage:Stage IIIA, dead, 832 days 52.0
TCGA-RD-A8N2-01A 59 years, female, white, stage:Stage IB, alive, 3540 days 48.0
TCGA-VQ-A91Z-01A 67 years, female, white, stage:Stage IIIA, alive, 1690 days 46.3
TCGA-D7-6519-01A 64 years, female, white, stage:'--, alive, 625 days 37.7
TCGA-CG-4440-01A 68 years, female, stage:Stage IV, dead, 122 days 26.8
TCGA-HF-A5NB-01A 75 years, female, stage:Stage IIIC, alive, 928 days 25.2
TCGA-CD-8535-01A 59 years, male, asian, stage:Stage IIIA, alive, 390 days 24.4
TCGA-CG-4469-01A 70 years, male, stage:Stage IV, dead, 215 days 19.1
TCGA-RD-A8N6-01A 78 years, female, white, stage:Stage IIIA, dead, 272 days 18.7
TCGA-BR-6801-01A 70 years, male, white, stage:Stage IIA, alive, 1223 days 15.6
TCGA-HU-8244-01A 77 years, female, asian, stage:Stage IA, alive, 742 days 13.3
TCGA-F1-6875-01A 79 years, male, black or african american, stage:Stage IA, dead, 2197 days 11.0
TCGA-KB-A93H-01A 79 years, female, asian, stage:Stage IIB, alive, 1145 days 8.7
TCGA-CG-4443-01A 68 years, male, stage:Stage IA, alive, 912 days 4.5
TCGA-IN-8663-01A 68 years, male, white, stage:Stage IIB, dead, 103 days 4.1
TCGA-HU-A4GU-01A 73 years, male, asian, stage:Stage IIB, alive, 200 days 2.4
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STOMACH CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Pending cancer tissue analysis

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