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TISSUE RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND APPENDIX BONE MARROW BREAST CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE KIDNEY LIVER LUNG LYMPH NODE OVARY PANCREAS
PARATHYROID GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.6 nTPM
GTEx:54.6 nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.6
GTEx sample id Sample description nTPM
Retina
Average nTPM: 54.6
Samples: 105

Max nTPM: 203.9
Min nTPM: 0.0
Std nTPM: 30.6
Median nTPM:
322_1 76 years, male 203.9
109_1 81 years, female 124.7
311_1 78 years, male 115.7
495_1 57 years, female 110.3
314_1 67 years, male 106.8
229_1 69 years, female 101.4
308_1 70 years, female 100.3
307_1 66 years, female 97.8
139_1 64 years, female 95.4
466_1 57 years, female 91.9
172_1 72 years, female 91.0
43_1 64 years, female 90.6
321_1 62 years, female 89.6
518_1 75 years, female 89.3
318_1 68 years, male 86.4
89_1 63 years, male 84.4
246_1 77 years, male 83.6
394_1 75 years, female 82.5
2_1 77 years, female 82.3
503_1 68 years, male 82.2
149_1 88 years, male 82.0
162_1 79 years, female 80.6
350_1 84 years, female 79.9
295_1 61 years, female 76.8
286_1 68 years, female 76.6
348_1 84 years, male 75.2
415_1 77 years, female 74.9
254_1 77 years, female 74.0
468_1 89 years, male 73.0
291_1 76 years, male 71.0
115_1 83 years, male 68.6
35_1 74 years, female 67.2
499_1 55 years, female 67.2
315_1 62 years, female 67.0
396_1 62 years, male 64.1
354_1 81 years, female 63.7
189_1 76 years, male 63.6
352_1 62 years, male 62.3
18_1 88 years, male 62.0
425_1 59 years, female 60.3
320_1 89 years, female 58.2
251_1 78 years, male 58.1
480_1 63 years, male 55.3
447_1 81 years, male 54.1
81_1 67 years, male 52.6
117_1 61 years, male 51.9
137_1 83 years, male 51.3
517_1 88 years, male 51.3
414_1 84 years, female 51.1
316_1 62 years, male 50.8
288_1 66 years, female 50.3
6_1 73 years, female 49.8
324_1 76 years, male 49.8
335_1 73 years, female 49.8
42_1 85 years, male 49.5
265_1 87 years, male 49.5
317_1 60 years, male 49.3
173_1 67 years, male 48.4
526_1 61 years, male 48.1
218_1 71 years, female 47.6
32_1 67 years, male 46.8
349_1 83 years, male 46.5
313_1 79 years, female 45.2
375_1 74 years, female 45.1
406_1 79 years, male 45.0
177_1 74 years, male 44.1
389_1 86 years, female 42.9
41_1 94 years, female 42.0
126_1 63 years, male 41.4
142_1 61 years, female 41.2
386_1 76 years, male 41.2
491_1 89 years, female 38.5
145_1 84 years, male 37.7
384_1 83 years, male 34.4
506_1 65 years, male 34.4
356_1 87 years, female 33.7
351_1 91 years, male 32.6
490_1 67 years, female 30.8
404_1 82 years, female 30.6
153_1 70 years, female 30.4
120_1 70 years, female 29.1
119_1 70 years, female 28.1
237_1 82 years, male 27.9
99_1 64 years, male 27.4
355_1 70 years, female 26.7
405_1 91 years, male 26.5
501_1 88 years, male 25.5
17_1 71 years, male 25.4
379_1 60 years, male 24.0
243_1 75 years, male 22.6
353_1 82 years, female 22.5
264_1 73 years, female 22.1
217_1 76 years, male 21.0
319_1 81 years, male 20.9
376_1 75 years, female 20.1
9_1 66 years, female 19.3
377_1 82 years, female 19.2
266_1 85 years, male 19.0
163_1 78 years, male 17.8
292_1 71 years, male 16.4
293_1 68 years, female 15.4
413_1 59 years, female 14.5
4_1 88 years, female 11.2
452_1 88 years, female 3.1
347_1 72 years, male 0.0
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