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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:150.4 nTPM
HPA Brain:148.9 nTPM
GTEx:150.4 nTPM
FANTOM5:280.5 Scaled Tags Per Million
Pig:236.4 nTPM
Mouse:543.5 nTPM
Allen mouse:19.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030780Antibody CAB005885Antibody CAB072343
Glial cells Not detectedHighNot detected
Neuronal cells Medium-Medium






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 139.3
2846 Female, age 79, unknown 161.7
2481 Female, age 94, left hemisphere 151.5
1857 Female, age 85, left hemisphere 144.8
2290 Female, age 72, unknown 143.3
1781 Male, age 74, unknown 137.0
2288 Male, age 75, left hemisphere 130.8
1854 Male, age 80, left hemisphere 130.1
2289 Male, age 61, right hemisphere 115.5
Globus pallidus, externus
nTPM: 94.1
2772 Female, age 79, unknown 130.2
2395 Male, age 75, both hemispheres 120.7
1996 Male, age 80, right hemisphere 98.9
2646 Male, age 61, right hemisphere 75.7
2567 Female, age 72, unknown 44.9
Globus pallidus, internus
nTPM: 96.6
2483 Female, age 94, right hemisphere 129.8
2287 Male, age 75, right hemisphere 118.9
1818 Male, age 74, unknown 115.5
2037 Male, age 80, right hemisphere 98.8
2778 Female, age 91, both hemispheres 92.1
2566 Female, age 72, unknown 61.9
2111 Female, age 85, right hemisphere 59.5
Nucleus accumbens
nTPM: 132.5
1856 Female, age 91, right hemisphere 170.9
2286 Male, age 75, left hemisphere 138.3
1783 Male, age 74, unknown 138.0
1806 Female, age 85, left hemisphere 137.3
2698 Female, age 72, unknown 135.9
2391 Female, age 94, left hemisphere 128.0
2824 Male, age 61, right hemisphere 123.9
2732 Male, age 80, right hemisphere 88.0
Nucleus basalis of Meynert
nTPM: 109.5
2393 Male, age 80, right hemisphere 127.0
2484 Female, age 94, left hemisphere 120.5
2821 Male, age 75, both hemispheres 117.6
2569 Male, age 61, both hemispheres 72.9
Nucleus of the diagonal band
nTPM: 148.9
1812 Female, age 91, both hemispheres 189.4
2775 Male, age 80, right hemisphere 166.9
2195 Female, age 85, both hemispheres 148.6
2029 Male, age 61, right hemisphere 128.5
1979 Male, age 74, unknown 111.1
Putamen
nTPM: 131.0
2466 Female, age 79, unknown 170.9
1838 Male, age 80, right hemisphere 146.7
2482 Female, age 94, left hemisphere 142.2
1829 Male, age 74, unknown 141.1
1937 Female, age 91, right hemisphere 138.0
2647 Male, age 75, left hemisphere 90.3
2489 Female, age 72, unknown 87.5
Septal nuclei
nTPM: 138.6
2031 Female, age 72, unknown 191.2
1960 Male, age 74, unknown 177.2
2009 Female, age 91, both hemispheres 153.0
2629 Female, age 94, right hemisphere 138.8
2059 Female, age 85, both hemispheres 110.1
2199 Male, age 80, right hemisphere 107.3
2394 Male, age 61, left hemisphere 92.6
Stria terminalis, bed nucleus
nTPM: 131.6
1974 Female, age 91, both hemispheres 165.8
2486 Female, age 94, both hemispheres 124.2
2201 Male, age 74, unknown 105.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 150.4
Samples: 246

Max nTPM: 314.2
Min nTPM: 65.4
Std nTPM: 50.4
Median nTPM: 150.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 314.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 285.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 283.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 279.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 265.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 262.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 262.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 249.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 244.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 239.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 237.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 236.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 235.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 230.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 230.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 228.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 226.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 225.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 225.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 224.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 222.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 220.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 220.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 220.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 219.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 219.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 217.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 216.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 213.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 212.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 212.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 210.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 210.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 208.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 208.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 208.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 207.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 206.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 204.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 204.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 200.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 199.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 197.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 196.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 195.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 195.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 195.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 193.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 191.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 190.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 189.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 189.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 189.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 189.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 188.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 187.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 187.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 186.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 186.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 186.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 185.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 184.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 183.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 182.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 182.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 182.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 182.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 181.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 181.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 181.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 179.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 178.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 177.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 177.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 177.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 176.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 176.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 174.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 174.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 174.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 174.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 174.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 172.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 171.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 171.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 170.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 170.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 169.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 169.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 168.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 167.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 167.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 166.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 166.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 166.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 166.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 165.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 165.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 165.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 164.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 164.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 162.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 162.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 162.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 162.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 160.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 160.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 160.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 160.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 159.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 158.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 157.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 156.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 156.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 155.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 155.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 155.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 155.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 154.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 153.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 153.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 150.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 150.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 150.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 149.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 149.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 144.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 143.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 143.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 141.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 141.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 140.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 139.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 138.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 138.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 137.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 137.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 135.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 135.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 134.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 131.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 131.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 131.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 130.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 130.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 130.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 130.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 128.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 128.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 128.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 127.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 126.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 126.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 125.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 124.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 123.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 123.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 121.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 121.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 121.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 120.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 120.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 119.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 119.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 119.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 117.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 117.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 116.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 115.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 115.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 115.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 115.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 114.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 114.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 113.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 113.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 111.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 111.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 109.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 109.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 108.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 108.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 107.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 106.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 106.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 106.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 105.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 105.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 104.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 104.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 104.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 103.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 101.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 100.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 100.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 99.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 97.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 97.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 96.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 95.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 94.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 94.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 94.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 92.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 92.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 91.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 91.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 91.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 90.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 90.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 87.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 86.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 86.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 85.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 85.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 84.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 84.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 83.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 83.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 83.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 82.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 82.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 82.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 82.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 81.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 79.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 77.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 75.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 74.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 73.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 73.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 71.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 70.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 69.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 65.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 147.8
Samples: 246

Max nTPM: 287.4
Min nTPM: 61.6
Std nTPM: 41.4
Median nTPM: 151.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 287.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 246.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 233.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 230.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 226.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 224.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 221.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 220.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 217.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 214.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 214.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 211.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 209.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 205.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 203.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 202.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 202.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 200.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 200.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 200.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 200.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 199.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 197.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 196.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 195.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 194.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 194.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 194.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 194.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 193.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 193.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 192.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 192.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 192.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 191.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 190.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 190.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 190.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 189.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 189.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 189.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 189.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 188.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 188.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 188.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 186.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 186.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 185.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 184.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 184.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 184.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 182.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 182.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 182.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 182.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 182.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 181.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 180.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 180.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 179.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 179.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 179.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 177.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 177.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 176.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 176.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 175.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 175.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 175.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 174.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 174.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 174.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 173.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 173.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 173.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 173.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 171.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 171.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 171.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 171.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 170.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 170.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 170.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 170.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 170.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 169.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 169.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 169.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 167.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 167.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 167.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 167.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 167.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 165.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 165.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 165.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 165.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 165.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 165.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 164.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 162.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 162.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 162.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 162.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 162.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 162.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 161.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 159.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 158.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 158.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 158.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 157.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 157.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 157.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 157.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 155.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 155.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 154.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 154.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 154.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 154.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 154.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 153.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 150.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 150.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 150.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 150.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 149.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 148.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 148.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 147.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 146.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 146.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 146.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 146.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 145.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 145.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 144.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 144.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 142.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 142.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 142.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 142.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 141.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 140.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 140.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 139.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 139.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 138.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 138.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 138.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 138.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 136.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 136.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 136.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 134.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 133.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 133.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 133.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 133.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 133.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 132.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 132.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 132.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 131.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 131.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 128.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 126.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 125.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 124.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 124.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 123.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 121.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 121.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 121.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 119.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 119.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 115.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 115.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 115.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 114.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 113.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 113.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 111.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 111.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 110.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 110.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 109.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 108.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 108.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 108.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 108.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 108.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 105.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 105.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 104.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 104.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 103.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 103.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 103.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 103.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 102.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 101.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 101.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 100.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 99.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 98.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 98.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 97.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 97.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 96.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 95.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 93.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 93.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 93.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 93.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 92.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 92.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 92.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 92.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 91.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 91.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 89.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 89.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 89.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 87.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 87.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 86.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 84.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 83.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 83.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 82.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 81.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 81.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 80.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 78.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 75.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 73.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 72.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 72.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 71.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 69.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 69.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 68.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 64.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 61.6
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Brain - Putamen (basal ganglia)
Average nTPM: 148.7
Samples: 205

Max nTPM: 290.5
Min nTPM: 71.2
Std nTPM: 47.6
Median nTPM: 142.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 290.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 265.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 262.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 253.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 250.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 244.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 243.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 240.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 240.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 238.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 238.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 237.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 237.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 235.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 230.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 228.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 227.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 226.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 226.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 224.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 221.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 220.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 219.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 214.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 214.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 211.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 210.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 210.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 207.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 206.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 203.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 203.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 200.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 197.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 195.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 194.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 191.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 191.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 191.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 190.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 190.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 189.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 189.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 187.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 185.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 185.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 183.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 181.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 181.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 178.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 177.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 176.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 175.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 175.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 175.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 175.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 173.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 173.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 173.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 173.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 173.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 173.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 173.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 172.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 172.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 172.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 169.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 168.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 167.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 167.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 166.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 164.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 162.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 162.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 160.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 160.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 160.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 158.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 157.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 156.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 156.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 155.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 155.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 154.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 154.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 154.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 154.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 153.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 152.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 152.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 150.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 148.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 147.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 147.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 147.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 147.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 146.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 146.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 144.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 144.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 144.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 142.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 142.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 140.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 140.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 139.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 138.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 138.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 138.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 137.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 136.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 135.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 135.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 134.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 134.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 134.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 134.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 133.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 133.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 133.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 132.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 132.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 132.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 130.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 130.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 127.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 123.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 123.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 123.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 122.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 122.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 122.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 122.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 121.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 121.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 120.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 120.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 120.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 119.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 119.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 119.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 119.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 118.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 117.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 117.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 117.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 116.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 116.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 115.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 113.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 113.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 111.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 110.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 110.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 109.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 109.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 109.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 107.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 105.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 105.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 104.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 104.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 104.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 103.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 103.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 103.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 102.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 100.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 100.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 100.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 99.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 99.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 99.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 98.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 98.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 98.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 98.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 98.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 97.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 97.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 97.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 96.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 95.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 94.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 92.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 92.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 89.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 88.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 85.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 84.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 84.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 83.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 83.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 80.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 79.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 79.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 78.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 78.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 76.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 75.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 75.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 73.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 72.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 71.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

280.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 191.0
FF:10164-103B2 76 years, female 191.0
Nucleus accumbens
Scaled Tags Per Million: 280.5
FF:10037-101F1 23-56 years, mixed 280.5
Putamen
Scaled Tags Per Million: 238.9
FF:10176-103C5 60 years, female 238.9
Globus pallidus
Scaled Tags Per Million: 137.0
FF:10175-103C4 60 years, female 160.8
FF:10161-103A8 76 years, female 113.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.4
Pig sample Sample description nTPM
Caudate
nTPM: 232.3
Samples: 4

Max nTPM: 276.4
Min nTPM: 207.3
Sample A Female 207.3
Sample B Female 233.9
Sample C Male 276.4
Sample D Male 211.7
Putamen
nTPM: 236.4
Samples: 4

Max nTPM: 345.5
Min nTPM: 174.7
Sample A Female 174.7
Sample B Female 201.4
Sample C Male 345.5
Sample D Male 224.1
Septum
nTPM: 198.6
Samples: 4

Max nTPM: 221.8
Min nTPM: 180.8
Sample A Female 204.7
Sample B Female 180.8
Sample C Male 221.8
Sample D Male 187.1
Ventral pallidum
nTPM: 206.1
Samples: 4

Max nTPM: 243.6
Min nTPM: 177.8
Sample A Female 192.1
Sample B Female 211.0
Sample C Male 243.6
Sample D Male 177.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

543.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 542.8
Samples: 4

Max nTPM: 584.7
Min nTPM: 512.7
Sample A Male 584.7
Sample B Male 553.6
Sample C Female 512.7
Sample D Female 520.0
Septum
nTPM: 475.4
Samples: 4

Max nTPM: 501.5
Min nTPM: 446.4
Sample A Male 484.1
Sample B Male 501.5
Sample C Female 469.4
Sample D Female 446.4
Ventral forebrain
nTPM: 543.6
Samples: 4

Max nTPM: 559.0
Min nTPM: 524.0
Sample A Male 524.0
Sample B Male 542.9
Sample C Female 559.0
Sample D Female 548.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.1
70194916 Antisense, RP_050517_02_A06, Mouse strain C57BL/6J (56 days, male) 20.0
70918898 Antisense, RP_050712_04_G03, Mouse strain C57BL/6J (56 days, male) 19.5
74957912 Antisense, RP_060315_05_A09, Mouse strain C57BL/6J (56 days, male) 17.9
Pallidum
Expression energy: 16.5
70194916 Antisense, RP_050517_02_A06, Mouse strain C57BL/6J (56 days, male) 17.5
70918898 Antisense, RP_050712_04_G03, Mouse strain C57BL/6J (56 days, male) 17.1
74957912 Antisense, RP_060315_05_A09, Mouse strain C57BL/6J (56 days, male) 15.0

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