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NCKIPSD
HPA
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  • NCKIPSD
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NCKIPSD
Synonyms AF3P21, DIP1, ORF1, SPIN90, WASLBP, WISH
Gene descriptioni

Full gene name according to HGNC.

NCK interacting protein with SH3 domain
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband p21.31
Chromosome location (bp) 48673844 - 48686364
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000213672 (version 109)
Entrez gene 51517
HGNC HGNC:15486
UniProt Q9NZQ3 (UniProt - Evidence at protein level)
neXtProt NX_Q9NZQ3
GeneCards NCKIPSD
Antibodypedia NCKIPSD antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Has an important role in stress fiber formation induced by active diaphanous protein homolog 1 (DRF1). Induces microspike formation, in vivo (By similarity). In vitro, stimulates N-WASP-induced ARP2/3 complex activation in the absence of CDC42 (By similarity). May play an important role in the maintenance of sarcomeres and/or in the assembly of myofibrils into sarcomeres. Implicated in regulation of actin polymerization and cell adhesion. Plays a role in angiogenesis.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene contains a nuclear localization signal. It plays a role in signal transduction, and may function in the maintenance of sarcomeres and in the assembly of myofibrils into sarcomeres. It also plays an important role in stress fiber formation This protein is involved in the formation and maintenance of dendritic spines, and modulates synaptic activity in neurons. The gene is involved in therapy-related leukemia by a chromosomal translocation t(3;11)(p21;q23) that involves this gene and the myeloid/lymphoid leukemia gene. Alternative splicing results in multiple transcript variants of this gene. [provided by RefSeq, Aug 2019]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NCKIPSD-201
ENSP00000294129
ENST00000294129
Q9NZQ3
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005829 [cytosol]
GO:0005882 [intermediate filament]
GO:0006897 [endocytosis]
GO:0007010 [cytoskeleton organization]
GO:0008092 [cytoskeletal protein binding]
GO:0008180 [COP9 signalosome]
GO:0010976 [positive regulation of neuron projection development]
GO:0017124 [SH3 domain binding]
GO:0071933 [Arp2/3 complex binding]
Show all
722 aa
79 kDa
No 2
NCKIPSD-202
ENSP00000396683
ENST00000413374
H7C0T9
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
151 aa
16.3 kDa
No 0
NCKIPSD-203
ENSP00000406442
ENST00000415281
H7C2K2
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
268 aa
29.1 kDa
No 0
NCKIPSD-204
ENSP00000389059
ENST00000416649
Q9NZQ3
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005829 [cytosol]
GO:0005882 [intermediate filament]
GO:0006897 [endocytosis]
GO:0007010 [cytoskeleton organization]
GO:0008092 [cytoskeletal protein binding]
GO:0008180 [COP9 signalosome]
GO:0017124 [SH3 domain binding]
GO:0071933 [Arp2/3 complex binding]
Show all
715 aa
78.2 kDa
No 2
NCKIPSD-205
ENSP00000416904
ENST00000426678
C9JC20
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
165 aa
16.9 kDa
No 0
NCKIPSD-206
ENSP00000409675
ENST00000439518
C9JSC3
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
395 aa
41.8 kDa
No 0
NCKIPSD-207
ENSP00000408588
ENST00000453349
C9JMQ4
[Direct mapping] NCK-interacting protein with SH3 domain
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
203 aa
21.1 kDa
No 0

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