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RPS29
HPA
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  • RPS29
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RPS29
Synonyms S29, uS14
Gene descriptioni

Full gene name according to HGNC.

Ribosomal protein S29
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Ribosomal proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q21.3
Chromosome location (bp) 49570984 - 49599164
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000213741 (version 109)
Entrez gene 6235
HGNC HGNC:10419
UniProt P62273 (UniProt - Evidence at protein level)
neXtProt NX_P62273
GeneCards RPS29
Antibodypedia RPS29 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the small ribosomal subunit 1, 2, 3. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell 4, 5, 6.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ribonucleoprotein, Ribosomal protein
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit and a member of the S14P family of ribosomal proteins. The protein, which contains a C2-C2 zinc finger-like domain that can bind to zinc, can enhance the tumor suppressor activity of Ras-related protein 1A (KREV1). It is located in the cytoplasm. Variable expression of this gene in colorectal cancers compared to adjacent normal tissues has been observed, although no correlation between the level of expression and the severity of the disease has been found. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RPS29-201
ENSP00000245458
ENST00000245458
P62273
[Direct mapping] 40S ribosomal protein S29
Show all
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002181 [cytoplasmic translation]
GO:0003735 [structural constituent of ribosome]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005791 [rough endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005925 [focal adhesion]
GO:0006412 [translation]
GO:0008270 [zinc ion binding]
GO:0015935 [small ribosomal subunit]
GO:0022627 [cytosolic small ribosomal subunit]
GO:0042788 [polysomal ribosome]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
GO:0098556 [cytoplasmic side of rough endoplasmic reticulum membrane]
GO:0110165 [cellular anatomical entity]
GO:1990904 [ribonucleoprotein complex]
Show all
56 aa
6.7 kDa
No 0
RPS29-202
ENSP00000379339
ENST00000396020
P62273
[Direct mapping] 40S ribosomal protein S29
Show all
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002181 [cytoplasmic translation]
GO:0003723 [RNA binding]
GO:0003735 [structural constituent of ribosome]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005791 [rough endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005925 [focal adhesion]
GO:0006412 [translation]
GO:0008270 [zinc ion binding]
GO:0015935 [small ribosomal subunit]
GO:0022627 [cytosolic small ribosomal subunit]
GO:0042788 [polysomal ribosome]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
GO:0098556 [cytoplasmic side of rough endoplasmic reticulum membrane]
GO:0110165 [cellular anatomical entity]
GO:1990904 [ribonucleoprotein complex]
Show all
67 aa
8.1 kDa
No 0
RPS29-204
ENSP00000496485
ENST00000554075
A0A2R8Y851
[Direct mapping] 40S ribosomal protein S29
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0003735 [structural constituent of ribosome]
GO:0005840 [ribosome]
GO:0006412 [translation]
GO:0008270 [zinc ion binding]
GO:0015935 [small ribosomal subunit]
GO:0110165 [cellular anatomical entity]
GO:1990904 [ribonucleoprotein complex]
Show all
87 aa
10.3 kDa
No 0
RPS29-205
ENSP00000495033
ENST00000556230
P62273
[Direct mapping] 40S ribosomal protein S29
Show all
Ribosomal proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002181 [cytoplasmic translation]
GO:0003735 [structural constituent of ribosome]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005791 [rough endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005840 [ribosome]
GO:0005925 [focal adhesion]
GO:0006412 [translation]
GO:0008270 [zinc ion binding]
GO:0015935 [small ribosomal subunit]
GO:0022627 [cytosolic small ribosomal subunit]
GO:0042788 [polysomal ribosome]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
GO:0098556 [cytoplasmic side of rough endoplasmic reticulum membrane]
GO:0110165 [cellular anatomical entity]
GO:1990904 [ribonucleoprotein complex]
Show all
56 aa
6.7 kDa
No 0
RPS29-206
ENSP00000478117
ENST00000557111
A0A087WTT6
[Direct mapping] 40S ribosomal protein S29
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003735 [structural constituent of ribosome]
GO:0005840 [ribosome]
GO:0006412 [translation]
GO:0008270 [zinc ion binding]
GO:0110165 [cellular anatomical entity]
GO:1990904 [ribonucleoprotein complex]
Show all
53 aa
6.1 kDa
No 0
RPS29-208
ENSP00000495688
ENST00000557519
A0A2R8Y6P7
[Direct mapping] 40S ribosomal protein S29
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
   Other congenital disorders
   Ribosomopathies
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003735 [structural constituent of ribosome]
GO:0005840 [ribosome]
GO:0006412 [translation]
GO:0008270 [zinc ion binding]
GO:0110165 [cellular anatomical entity]
GO:1990904 [ribonucleoprotein complex]
Show all
48 aa
5.7 kDa
No 0

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