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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:145.6 nTPM
HPA Brain:67.2 nTPM
GTEx:145.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 38.9
2048 Male, age 55, midline 92.7
2565 Male, age 75, midline 30.2
2816 Male, age 47, midline 26.7
1981 Female, age 72, midline 24.4
2194 Female, age 79, both hemispheres 20.3
Cervical spinal cord, dorsal horn
nTPM: 26.3
1877 Male, age 55, unknown 46.1
2173 Female, age 72, unknown 38.9
2721 Male, age 90, both hemispheres 36.4
2069 Male, age 47, both hemispheres 19.6
2297 Male, age 75, both hemispheres 12.7
2296 Male, age 66, both hemispheres 3.9
Cervical spinal cord, ventral horn
nTPM: 67.2
2295 Male, age 66, both hemispheres 124.3
2098 Female, age 72, unknown 87.2
2809 Male, age 90, both hemispheres 73.8
2820 Female, age 79, both hemispheres 54.0
2480 Male, age 75, both hemispheres 53.0
2068 Male, age 55, unknown 11.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 145.6
Samples: 159

Max nTPM: 290.3
Min nTPM: 50.2
Std nTPM: 49.1
Median nTPM: 142.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 290.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 269.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 262.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 248.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 246.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 244.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 241.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 234.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 233.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 231.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 229.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 226.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 225.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 224.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 219.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 217.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 217.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 213.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 212.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 204.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 200.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 198.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 198.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 197.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 197.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 196.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 193.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 190.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 189.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 187.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 184.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 184.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 184.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 184.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 182.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 182.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 182.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 181.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 179.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 176.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 175.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 175.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 174.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 173.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 173.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 171.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 169.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 168.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 165.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 163.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 163.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 162.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 162.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 162.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 161.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 160.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 159.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 159.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 158.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 157.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 157.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 157.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 156.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 154.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 153.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 152.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 152.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 150.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 149.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 149.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 148.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 147.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 147.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 147.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 146.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 145.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 144.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 143.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 142.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 142.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 141.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 141.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 140.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 140.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 139.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 136.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 134.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 134.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 133.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 133.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 132.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 132.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 130.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 129.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 129.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 129.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 128.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 127.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 127.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 127.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 126.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 124.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 123.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 123.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 121.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 120.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 120.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 119.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 119.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 116.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 116.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 116.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 115.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 115.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 114.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 113.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 112.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 110.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 109.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 109.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 109.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 107.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 106.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 106.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 105.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 104.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 104.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 103.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 101.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 101.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 100.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 97.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 96.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 95.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 94.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 92.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 91.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 91.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 89.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 87.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 84.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 83.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 83.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 83.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 83.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 82.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 80.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 77.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 76.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 72.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 70.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 70.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 67.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 65.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 61.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 59.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 55.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 53.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 50.2
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