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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:69613.7 nTPM
Pig:22564.2 nTPM

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69613.7
Sample id Sample description nTPM
Area postrema
nTPM: 60397.8
2306 Male, age 80, both hemispheres 93076.5
2799 Male, age 61, both hemispheres 60767.5
2054 Male, age 76, both hemispheres 27349.2
Dorsal medullary reticular nucleus
nTPM: 36099.9
2373 Male, age 61, both hemispheres 48251.2
2088 Male, age 76, both hemispheres 47356.1
2040 Female, age 85, both hemispheres 12692.3
Dorsal motor vagal complex
nTPM: 57938.9
2797 Male, age 61, both hemispheres 93606.1
2185 Male, age 76, both hemispheres 93339.5
2807 Female, age 85, both hemispheres 91120.0
2813 Female, age 72, unknown 53929.8
2643 Male, age 74, both hemispheres 43379.5
2844 Male, age 55, unknown 36565.9
2133 Female, age 91, both hemispheres 29560.5
2000 Male, age 74, unknown 22009.6
Gigantocellular reticular nuclei, medullary
nTPM: 46627.9
2310 Male, age 80, both hemispheres 80865.2
2314 Male, age 61, both hemispheres 65670.6
2387 Female, age 91, both hemispheres 62105.9
2462 Male, age 74, both hemispheres 37859.5
2022 Male, age 76, right hemisphere 22183.4
1876 Female, age 85, both hemispheres 11082.6
Gigantocellular reticular nuclei, pars
nTPM: 66051.1
2330 Male, age 80, both hemispheres 134957.5
2706 Male, age 80, both hemispheres 66307.6
2336 Male, age 61, both hemispheres 48064.0
2168 Male, age 76, both hemispheres 45885.7
2084 Female, age 85, both hemispheres 35040.6
Inferior olive
nTPM: 45198.9
2628 Female, age 91, both hemispheres 75245.8
2379 Male, age 80, both hemispheres 64733.3
2085 Female, age 85, both hemispheres 35818.7
2178 Male, age 61, both hemispheres 33272.9
2563 Male, age 74, both hemispheres 16923.8
Lateral medullary reticular nucleus
nTPM: 37204.8
2374 Male, age 61, both hemispheres 77480.7
2804 Female, age 91, both hemispheres 53999.8
2190 Female, age 85, both hemispheres 42037.1
2044 Male, age 76, both hemispheres 21083.0
2852 Male, age 80, both hemispheres 14358.5
2305 Male, age 74, both hemispheres 14269.6
Medial olivary nucleus
nTPM: 25892.3
2851 Male, age 80, both hemispheres 66239.0
2138 Female, age 91, both hemispheres 16199.3
1962 Male, age 76, both hemispheres 14185.3
1943 Male, age 61, both hemispheres 6945.6
Medial vestibular nucleus
nTPM: 40454.9
2624 Male, age 61, both hemispheres 50916.8
2803 Female, age 91, both hemispheres 48855.9
2134 Male, age 76, both hemispheres 48285.4
2801 Male, age 74, both hemispheres 40505.7
2093 Male, age 80, both hemispheres 31517.2
2743 Female, age 85, both hemispheres 22648.3
Motor hypoglossal nucleus
nTPM: 51248.8
2461 Male, age 61, both hemispheres 105599.5
2182 Male, age 80, both hemispheres 65214.8
2132 Female, age 85, both hemispheres 48819.3
2125 Female, age 91, both hemispheres 20990.4
2277 Male, age 76, both hemispheres 15619.8
Nucleus ambiguus
nTPM: 9552.9
2071 Male, age 76, both hemispheres 10653.8
2096 Female, age 85, both hemispheres 8452.0
Nucleus cuneatus
nTPM: 65117.6
2805 Female, age 91, both hemispheres 124682.6
2381 Male, age 80, both hemispheres 91393.9
2808 Female, age 85, both hemispheres 82341.1
2131 Male, age 76, both hemispheres 68263.7
2100 Male, age 76, both hemispheres 62162.0
2380 Male, age 80, both hemispheres 58984.3
2562 Male, age 61, both hemispheres 39236.4
2564 Male, age 74, both hemispheres 29922.0
2376 Male, age 61, both hemispheres 29072.2
Nucleus gracilis
nTPM: 69613.7
2299 Female, age 85, both hemispheres 113853.9
2382 Male, age 80, both hemispheres 70488.7
2627 Male, age 74, both hemispheres 24498.6
Nucleus raphe obscurus
nTPM: 20361.3
2845 Female, age 85, midline 28942.3
2800 Male, age 61, midline 22500.7
2142 Male, age 76, midline 9640.9
Nucleus raphe pallidus
nTPM: 17740.3
2183 Male, age 80, midline 35766.2
2145 Male, age 76, midline 11838.1
1924 Male, age 61, midline 5616.6
Nucleus tractus solitarii
nTPM: 45216.5
2307 Male, age 80, both hemispheres 72622.8
2191 Female, age 85, both hemispheres 66959.5
2656 Male, age 76, both hemispheres 28433.3
2144 Female, age 91, right hemisphere 12850.6
Parvicellular reticular nuclei
nTPM: 30334.9
2095 Male, age 76, both hemispheres 39532.9
2558 Male, age 74, both hemispheres 30315.8
2119 Male, age 80, both hemispheres 21155.9
Parvicellular reticular nuclei, medullary
nTPM: 42653.7
2181 Male, age 80, left hemisphere 61529.8
2189 Female, age 91, both hemispheres 36624.5
2091 Female, age 85, both hemispheres 29806.8
Peritrigeminal nucleus
nTPM: 23425.0
2136 Male, age 76, both hemispheres 34145.1
2179 Male, age 61, both hemispheres 21999.2
2067 Female, age 85, both hemispheres 14130.6
Prepositus hypoglossal nucleus
nTPM: 32869.2
2855 Female, age 85, right hemisphere 34079.1
2086 Male, age 80, both hemispheres 31659.2
Spinal trigeminal nucleus, caudal
nTPM: 55562.8
2308 Male, age 80, both hemispheres 72017.1
2390 Female, age 91, both hemispheres 71441.1
2447 Male, age 76, both hemispheres 56559.6
2312 Male, age 61, both hemispheres 40577.9
2642 Male, age 74, both hemispheres 37218.3
Spinal trigeminal nucleus, interpolar
nTPM: 34280.0
2389 Female, age 91, both hemispheres 67262.0
2625 Male, age 61, both hemispheres 41606.2
2066 Male, age 76, right hemisphere 27291.2
2386 Female, age 85, both hemispheres 20471.0
2033 Male, age 80, both hemispheres 14769.7
Spinal vestibular nucleus
nTPM: 38579.6
2796 Male, age 61, both hemispheres 63686.8
2806 Female, age 85, both hemispheres 51129.7
2748 Male, age 76, both hemispheres 34659.3
2186 Female, age 91, both hemispheres 33638.0
2384 Male, age 74, both hemispheres 24592.9
2780 Male, age 80, both hemispheres 23770.7
Superior vestibular nucleus
nTPM: 23119.3
2061 Male, age 76, both hemispheres 29903.1
2383 Male, age 74, both hemispheres 21189.4
2015 Male, age 80, both hemispheres 18265.5
Ventral medullary reticular nucleus
nTPM: 39828.9
2372 Male, age 61, both hemispheres 47179.4
2060 Male, age 76, both hemispheres 32478.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 34790.0
2302 Female, age 91, both hemispheres 64345.4
2180 Male, age 61, both hemispheres 36095.8
2118 Male, age 80, both hemispheres 26829.7
1986 Male, age 76, both hemispheres 23877.8
2741 Female, age 85, both hemispheres 22801.3

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22564.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 22564.1
Samples: 4

Max nTPM: 31881.8
Min nTPM: 17733.6
Sample A Female 31881.8
Sample B Female 21309.3
Sample C Male 19331.8
Sample D Male 17733.6

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