We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
OST4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • OST4
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:208.9 nTPM
HPA Brain:142.3 nTPM
GTEx:208.9 nTPM
FANTOM5:397.2 Scaled Tags Per Million
Pig:616.2 nTPM
Mouse:114.2 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 142.3
2481 Female, age 94, left hemisphere 167.3
2288 Male, age 75, left hemisphere 158.1
1857 Female, age 85, left hemisphere 147.1
1854 Male, age 80, left hemisphere 143.3
2846 Female, age 79, unknown 142.8
2290 Female, age 72, unknown 135.3
1781 Male, age 74, unknown 131.1
2289 Male, age 61, right hemisphere 113.7
Globus pallidus, externus
nTPM: 139.3
1996 Male, age 80, right hemisphere 176.9
2772 Female, age 79, unknown 168.5
2395 Male, age 75, both hemispheres 131.5
2646 Male, age 61, right hemisphere 117.5
2567 Female, age 72, unknown 102.1
Globus pallidus, internus
nTPM: 139.2
2483 Female, age 94, right hemisphere 164.8
2037 Male, age 80, right hemisphere 162.8
1818 Male, age 74, unknown 152.1
2287 Male, age 75, right hemisphere 138.4
2778 Female, age 91, both hemispheres 134.3
2566 Female, age 72, unknown 116.1
2111 Female, age 85, right hemisphere 106.1
Nucleus accumbens
nTPM: 140.3
1806 Female, age 85, left hemisphere 157.5
1856 Female, age 91, right hemisphere 157.2
2698 Female, age 72, unknown 153.3
1783 Male, age 74, unknown 149.8
2286 Male, age 75, left hemisphere 138.5
2391 Female, age 94, left hemisphere 133.5
2824 Male, age 61, right hemisphere 119.0
2732 Male, age 80, right hemisphere 113.7
Nucleus basalis of Meynert
nTPM: 133.3
2569 Male, age 61, both hemispheres 148.0
2821 Male, age 75, both hemispheres 135.0
2393 Male, age 80, right hemisphere 130.3
2484 Female, age 94, left hemisphere 119.9
Nucleus of the diagonal band
nTPM: 118.6
1812 Female, age 91, both hemispheres 141.1
2195 Female, age 85, both hemispheres 124.4
2775 Male, age 80, right hemisphere 123.8
1979 Male, age 74, unknown 112.7
2029 Male, age 61, right hemisphere 90.7
Putamen
nTPM: 117.9
2482 Female, age 94, left hemisphere 144.7
1838 Male, age 80, right hemisphere 134.4
2466 Female, age 79, unknown 126.0
1937 Female, age 91, right hemisphere 123.1
1829 Male, age 74, unknown 100.5
2489 Female, age 72, unknown 100.4
2647 Male, age 75, left hemisphere 96.3
Septal nuclei
nTPM: 120.4
2031 Female, age 72, unknown 140.3
2199 Male, age 80, right hemisphere 129.3
1960 Male, age 74, unknown 121.2
2394 Male, age 61, left hemisphere 118.0
2629 Female, age 94, right hemisphere 116.4
2009 Female, age 91, both hemispheres 112.1
2059 Female, age 85, both hemispheres 105.8
Stria terminalis, bed nucleus
nTPM: 97.1
2201 Male, age 74, unknown 101.9
1974 Female, age 91, both hemispheres 99.8
2486 Female, age 94, both hemispheres 89.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 180.8
Samples: 246

Max nTPM: 397.9
Min nTPM: 71.6
Std nTPM: 45.9
Median nTPM: 175.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 397.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 369.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 325.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 314.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 301.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 288.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 281.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 279.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 274.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 268.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 265.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 265.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 265.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 261.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 255.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 255.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 253.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 252.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 249.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 246.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 243.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 242.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 240.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 239.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 238.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 236.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 236.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 235.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 231.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 231.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 231.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 230.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 228.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 224.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 223.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 223.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 221.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 218.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 216.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 216.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 215.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 215.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 214.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 214.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 213.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 213.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 213.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 212.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 212.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 212.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 212.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 211.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 211.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 211.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 210.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 210.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 210.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 210.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 209.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 209.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 208.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 207.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 207.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 203.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 202.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 202.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 202.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 202.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 201.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 199.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 199.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 199.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 197.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 197.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 197.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 196.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 196.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 196.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 195.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 195.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 195.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 194.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 194.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 192.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 192.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 192.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 192.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 191.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 191.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 190.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 190.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 188.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 188.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 188.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 187.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 187.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 187.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 186.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 185.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 184.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 184.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 184.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 183.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 183.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 183.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 183.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 182.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 181.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 181.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 180.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 180.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 179.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 178.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 178.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 177.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 176.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 176.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 176.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 175.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 175.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 175.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 175.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 175.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 174.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 174.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 174.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 173.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 173.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 172.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 172.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 171.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 171.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 170.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 170.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 170.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 170.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 168.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 168.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 167.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 167.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 166.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 166.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 166.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 165.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 165.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 165.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 164.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 164.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 164.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 163.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 162.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 162.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 162.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 162.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 161.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 161.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 161.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 161.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 161.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 161.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 160.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 159.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 159.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 159.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 158.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 158.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 158.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 158.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 157.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 157.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 156.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 155.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 155.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 155.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 155.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 155.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 155.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 154.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 154.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 152.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 151.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 151.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 150.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 149.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 148.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 146.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 146.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 145.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 145.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 145.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 143.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 143.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 143.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 143.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 143.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 142.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 142.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 141.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 140.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 139.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 139.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 139.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 138.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 138.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 138.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 136.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 135.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 135.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 134.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 134.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 134.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 134.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 134.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 133.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 133.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 133.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 133.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 132.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 132.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 131.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 131.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 130.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 129.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 129.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 128.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 128.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 127.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 124.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 123.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 122.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 122.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 122.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 121.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 121.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 116.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 116.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 107.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 106.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 82.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 81.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 71.6
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 208.9
Samples: 246

Max nTPM: 659.4
Min nTPM: 98.4
Std nTPM: 64.8
Median nTPM: 196.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 659.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 493.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 491.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 387.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 382.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 353.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 344.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 336.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 326.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 323.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 315.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 315.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 307.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 305.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 303.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 301.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 299.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 294.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 293.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 293.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 293.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 292.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 291.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 288.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 282.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 281.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 278.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 274.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 273.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 272.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 272.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 272.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 269.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 268.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 264.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 264.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 263.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 263.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 260.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 258.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 258.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 257.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 253.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 253.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 252.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 251.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 251.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 251.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 250.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 248.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 248.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 248.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 246.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 243.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 241.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 239.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 239.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 239.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 238.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 238.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 236.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 236.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 236.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 236.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 235.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 234.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 234.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 234.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 233.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 233.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 231.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 231.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 230.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 230.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 229.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 229.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 226.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 225.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 225.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 225.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 223.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 222.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 222.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 221.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 221.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 221.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 221.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 220.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 220.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 220.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 219.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 217.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 217.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 216.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 213.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 212.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 211.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 210.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 209.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 209.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 209.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 208.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 208.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 208.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 208.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 207.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 207.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 206.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 205.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 205.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 203.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 203.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 202.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 202.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 201.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 201.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 200.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 200.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 199.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 199.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 199.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 198.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 197.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 195.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 195.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 195.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 195.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 195.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 194.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 193.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 193.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 191.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 190.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 189.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 188.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 188.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 187.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 187.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 187.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 186.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 186.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 185.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 184.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 183.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 183.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 183.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 182.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 182.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 182.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 182.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 181.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 180.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 180.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 180.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 179.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 179.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 178.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 178.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 178.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 178.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 178.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 177.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 177.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 176.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 176.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 176.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 175.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 175.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 175.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 175.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 175.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 175.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 174.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 173.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 172.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 172.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 172.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 171.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 169.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 169.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 169.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 169.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 169.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 168.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 168.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 167.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 166.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 165.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 164.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 164.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 163.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 163.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 163.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 163.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 162.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 161.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 160.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 159.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 158.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 158.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 157.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 157.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 157.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 157.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 156.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 156.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 154.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 154.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 153.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 153.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 152.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 152.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 151.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 151.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 151.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 149.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 149.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 147.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 145.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 145.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 144.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 143.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 143.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 142.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 141.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 141.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 140.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 140.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 137.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 137.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 136.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 135.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 134.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 133.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 132.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 131.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 131.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 130.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 129.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 128.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 126.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 125.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 112.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 112.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 106.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 98.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 185.4
Samples: 205

Max nTPM: 383.3
Min nTPM: 92.7
Std nTPM: 44.4
Median nTPM: 180.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 383.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 311.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 301.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 299.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 290.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 289.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 287.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 284.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 282.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 269.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 268.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 268.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 268.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 264.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 263.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 259.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 257.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 255.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 255.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 248.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 247.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 246.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 244.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 244.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 240.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 240.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 236.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 231.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 230.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 228.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 227.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 225.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 224.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 224.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 222.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 219.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 219.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 218.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 218.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 217.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 215.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 212.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 212.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 210.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 210.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 209.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 208.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 208.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 206.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 206.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 206.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 206.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 206.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 205.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 204.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 203.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 202.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 202.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 202.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 202.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 201.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 201.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 201.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 200.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 200.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 199.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 199.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 199.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 198.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 197.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 197.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 197.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 195.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 194.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 194.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 193.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 192.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 192.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 192.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 192.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 191.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 191.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 190.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 190.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 190.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 190.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 189.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 189.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 187.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 187.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 187.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 187.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 186.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 185.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 185.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 184.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 184.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 184.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 184.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 183.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 181.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 180.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 180.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 178.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 176.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 175.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 175.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 175.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 174.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 173.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 173.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 172.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 171.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 171.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 170.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 169.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 168.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 168.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 168.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 168.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 167.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 167.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 166.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 166.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 166.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 165.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 164.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 163.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 163.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 162.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 162.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 162.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 162.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 162.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 162.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 162.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 161.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 161.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 160.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 160.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 160.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 159.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 159.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 159.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 159.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 158.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 157.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 157.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 156.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 155.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 154.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 154.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 154.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 154.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 153.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 153.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 152.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 152.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 152.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 152.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 152.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 151.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 150.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 150.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 150.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 150.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 148.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 148.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 147.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 146.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 146.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 146.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 145.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 144.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 144.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 144.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 143.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 143.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 142.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 141.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 140.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 140.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 140.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 140.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 135.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 133.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 133.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 133.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 132.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 130.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 130.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 128.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 128.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 126.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 126.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 125.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 124.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 123.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 122.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 121.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 117.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 115.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 112.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 99.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 92.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

397.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 288.5
FF:10164-103B2 76 years, female 288.5
Nucleus accumbens
Scaled Tags Per Million: 240.5
FF:10037-101F1 23-56 years, mixed 240.5
Putamen
Scaled Tags Per Million: 340.4
FF:10176-103C5 60 years, female 340.4
Globus pallidus
Scaled Tags Per Million: 397.2
FF:10175-103C4 60 years, female 518.7
FF:10161-103A8 76 years, female 275.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

616.2
Pig sample Sample description nTPM
Caudate
nTPM: 491.3
Samples: 4

Max nTPM: 580.8
Min nTPM: 393.3
Sample A Female 393.3
Sample B Female 544.6
Sample C Male 580.8
Sample D Male 446.6
Putamen
nTPM: 616.2
Samples: 4

Max nTPM: 699.3
Min nTPM: 481.4
Sample A Female 699.3
Sample B Female 481.4
Sample C Male 597.8
Sample D Male 686.1
Septum
nTPM: 561.4
Samples: 4

Max nTPM: 620.5
Min nTPM: 513.8
Sample A Female 620.5
Sample B Female 513.8
Sample C Male 587.4
Sample D Male 523.9
Ventral pallidum
nTPM: 515.2
Samples: 4

Max nTPM: 623.6
Min nTPM: 459.8
Sample A Female 459.8
Sample B Female 623.6
Sample C Male 470.2
Sample D Male 507.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 114.2
Samples: 4

Max nTPM: 125.9
Min nTPM: 105.7
Sample A Male 106.3
Sample B Male 118.9
Sample C Female 105.7
Sample D Female 125.9
Septum
nTPM: 112.7
Samples: 4

Max nTPM: 126.0
Min nTPM: 102.1
Sample A Male 103.1
Sample B Male 119.5
Sample C Female 126.0
Sample D Female 102.1
Ventral forebrain
nTPM: 106.6
Samples: 4

Max nTPM: 121.1
Min nTPM: 97.8
Sample A Male 98.9
Sample B Male 108.4
Sample C Female 121.1
Sample D Female 97.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
631702 Antisense, RP_040907_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.1
631702 Antisense, RP_040907_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org