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RPS18
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CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS18 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4267.52
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6279.7
Number of samples 497
Samples
Sample Description pTPM
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 33838.3
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 32642.8
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 32546.0
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 29284.4
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 26544.0
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 25916.5
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 23035.1
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 20157.5
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 19707.1
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 19275.4
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 18601.2
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 18183.6
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 17265.1
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 16266.2
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 16125.4
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 15862.0
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 15746.2
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 15725.2
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 15700.7
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 15568.8
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 15465.0
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 15221.1
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 14761.6
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 14365.9
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 13993.1
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 13772.0
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 12989.5
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 12989.1
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 12922.9
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 12367.3
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 12164.6
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 12053.5
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 12020.8
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 11851.0
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 11848.0
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 11825.8
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 11731.1
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 11607.1
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 11554.9
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 11445.4
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 11422.6
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 11257.2
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 11242.9
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 11041.8
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 11015.1
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 10792.1
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 10742.9
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 10618.3
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 10548.4
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 10532.1
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 10493.6
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 10485.1
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 10477.8
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 10376.3
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 10360.2
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 10192.7
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 10025.9
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 9807.1
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 9765.1
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 9726.3
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 9721.1
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 9705.1
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 9649.4
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 9453.0
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 9440.6
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 9417.3
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 9408.4
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 9369.8
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 9220.9
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 9199.6
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 9199.5
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 9156.6
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 9133.4
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 9092.3
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 9091.1
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 9015.3
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 9003.4
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 8908.6
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 8888.3
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 8875.8
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 8842.1
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 8834.5
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 8815.7
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 8790.5
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 8789.3
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 8788.5
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 8766.0
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 8698.3
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 8693.3
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 8666.7
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 8662.2
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 8651.6
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 8586.1
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 8544.8
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 8533.3
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 8517.1
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 8516.0
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 8509.3
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 8463.4
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 8395.2
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 8371.9
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 8367.0
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 8273.6
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 8230.2
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 8196.7
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 8192.1
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 8132.3
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 8114.6
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 8099.6
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 8093.7
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 8043.0
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 7953.7
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 7953.4
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 7943.9
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 7925.4
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 7878.9
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 7858.5
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 7855.9
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 7780.9
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 7772.3
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 7767.5
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 7719.6
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 7690.9
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 7674.5
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 7659.2
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 7652.9
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 7649.6
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 7599.7
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 7557.3
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 7552.3
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 7497.9
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 7486.9
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 7449.8
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 7397.8
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 7368.1
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 7342.1
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 7326.0
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 7298.3
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 7292.4
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 7282.9
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 7244.9
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 7225.6
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 7219.1
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 7191.0
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 7181.3
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 7120.0
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 7053.3
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 7037.2
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 7007.8
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 6967.8
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 6957.6
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 6942.8
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 6938.3
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 6845.8
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 6813.6
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 6774.5
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 6748.5
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 6748.5
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 6739.3
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 6710.8
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 6699.6
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 6622.5
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 6610.3
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 6599.9
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 6579.5
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 6574.4
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 6568.0
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 6563.5
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 6558.1
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 6541.4
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 6499.2
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 6474.4
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 6435.2
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 6410.7
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 6403.9
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 6261.7
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 6253.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 6223.0
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 6221.5
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 6076.1
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 6064.2
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 6036.4
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 6034.8
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 6028.4
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 6023.4
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 6008.4
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 6008.2
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 5957.3
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 5911.0
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 5883.5
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 5854.2
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 5843.5
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 5840.0
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 5832.3
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 5806.2
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 5801.1
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 5778.3
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 5747.0
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 5731.8
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 5711.3
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 5701.1
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 5697.6
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 5696.6
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 5677.4
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 5599.5
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 5596.7
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 5581.1
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 5576.8
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 5549.0
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 5547.0
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 5524.4
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 5521.6
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 5507.4
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 5505.6
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 5478.6
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 5476.9
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 5474.6
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 5456.8
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 5364.3
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 5358.2
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 5336.5
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 5330.7
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 5312.3
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 5299.1
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 5290.7
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 5284.1
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 5265.7
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 5238.5
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 5231.4
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 5211.5
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 5201.0
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 5188.5
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 5184.8
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 5183.9
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 5181.6
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 5178.3
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 5173.4
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 5164.9
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 5164.9
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 5162.9
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 5149.7
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 5148.5
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 5147.3
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 5141.6
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 5131.4
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 5109.6
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 5106.0
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 5085.1
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 5075.2
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 5050.8
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 5019.9
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 5006.9
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 5003.2
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 4989.6
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 4988.5
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 4966.6
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 4954.3
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 4943.6
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 4938.7
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 4915.6
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4915.4
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 4898.3
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 4883.7
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 4883.5
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 4842.2
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 4793.9
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 4769.5
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 4730.2
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 4723.3
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 4711.6
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 4705.3
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 4695.5
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 4679.3
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 4648.5
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 4640.0
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 4624.4
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 4621.2
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 4615.3
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 4607.9
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 4606.9
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 4591.2
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 4565.4
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 4562.9
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 4548.9
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 4540.8
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 4532.9
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 4517.2
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 4513.3
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 4500.2
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 4497.1
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 4486.1
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 4469.6
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 4464.8
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 4447.0
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 4439.9
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 4431.8
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 4423.3
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 4409.5
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 4382.1
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 4373.8
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 4361.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 4323.4
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 4312.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 4311.6
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 4307.9
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 4304.2
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 4302.5
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 4283.1
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 4281.5
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 4270.5
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 4267.5
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 4249.7
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 4236.6
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 4231.0
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 4227.2
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 4214.9
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 4212.0
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 4200.0
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 4180.6
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 4178.7
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 4175.6
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 4174.3
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 4170.0
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 4155.2
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 4152.9
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 4150.9
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 4141.8
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 4125.0
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 4110.4
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 4105.9
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 4104.2
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 4098.8
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 4088.8
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 4065.3
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 4050.5
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 4034.6
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 4018.1
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 4002.8
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 3987.1
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 3969.0
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 3966.5
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 3952.5
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 3952.2
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 3944.1
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 3933.5
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 3930.5
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 3908.3
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 3903.7
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 3886.7
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 3886.0
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 3871.9
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 3854.9
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 3854.1
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 3852.9
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 3852.7
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 3850.0
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 3821.0
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 3792.4
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 3791.2
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 3772.5
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 3770.0
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 3767.4
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 3764.2
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 3761.7
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 3761.5
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 3746.9
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 3734.0
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 3728.4
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 3690.1
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 3684.9
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 3679.4
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 3678.1
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 3668.9
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 3652.6
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 3649.4
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 3645.6
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 3630.4
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 3620.6
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 3617.1
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 3617.0
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 3602.6
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 3595.8
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 3585.2
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 3569.5
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 3563.3
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 3561.2
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 3560.5
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 3560.0
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 3538.8
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 3538.7
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 3522.3
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 3516.8
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 3512.9
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 3477.4
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 3473.8
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 3471.3
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 3468.9
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 3465.0
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 3447.5
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 3438.3
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3427.2
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 3425.0
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 3417.6
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 3416.6
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 3409.5
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3389.5
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 3383.1
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 3382.4
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 3357.1
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 3355.4
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 3333.2
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 3325.9
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 3325.3
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 3305.0
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 3303.0
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 3285.9
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 3279.8
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 3274.9
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 3267.5
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 3266.1
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 3261.6
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 3255.8
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 3252.8
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 3243.4
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 3220.9
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 3204.9
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 3204.2
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 3203.5
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 3196.9
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 3196.1
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 3187.7
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 3186.7
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 3171.0
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 3154.5
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 3134.3
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 3131.9
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 3098.7
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 3067.8
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 3043.6
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 3043.3
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 3024.3
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 3018.8
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 3015.9
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 3011.0
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 3009.7
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 2978.4
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 2963.1
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 2950.1
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 2935.0
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 2933.8
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 2927.7
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 2883.8
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 2881.2
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 2862.9
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 2851.8
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 2849.2
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 2845.9
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 2845.6
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 2838.8
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 2837.1
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 2830.1
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 2828.7
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 2816.5
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 2788.3
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 2785.0
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 2725.0
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 2721.6
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 2712.3
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 2696.2
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 2686.5
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 2679.9
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 2677.7
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 2675.4
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 2672.7
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 2659.2
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 2624.0
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 2617.0
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 2607.2
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 2571.3
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 2569.5
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 2498.5
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 2455.0
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 2397.3
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 2390.7
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 2317.7
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 2265.7
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 2236.0
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 2211.9
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 2170.1
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 2148.1
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 2144.7
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 2144.7
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 2101.8
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 2043.1
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1918.5
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 1778.6
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 1586.4
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS18 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4264.81
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5317.1
Number of samples 105
Samples
Sample Description pTPM
L851 70 years, male, stage:Stage IB, dead, 1315 days 14733.8
L842 62 years, female, stage:Stage IB, alive, 2005 days 14216.7
L616 54 years, male, stage:Stage IA, dead, 410 days 12164.5
L473 66 years, female, stage:Stage IA, alive, 3021 days 12006.7
L683 77 years, female, stage:Stage IIA, dead, 612 days 10344.5
L532 69 years, female, stage:Stage IA, dead, 301 days 9967.3
L827 70 years, male, stage:Stage IIB, dead, 1105 days 9615.0
L773 64 years, female, stage:Stage IV, dead, 311 days 8665.4
L850 77 years, male, stage:Stage IIIA, dead, 997 days 8512.2
L462 67 years, male, stage:Stage IIIA, dead, 568 days 8451.6
L662 66 years, male, stage:Stage IA, dead, 865 days 8011.4
L561 62 years, female, stage:Stage IA, alive, 2543 days 7812.0
L613 72 years, male, stage:Stage IIIA, dead, 19 days 7642.7
L829 76 years, male, stage:Stage IA, alive, 2173 days 7370.6
L703 71 years, male, stage:Stage IIA, dead, 1137 days 7120.5
L630 65 years, female, stage:Stage IA, dead, 1733 days 7010.1
L551 62 years, male, stage:Stage IA, alive, 2924 days 6908.3
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 6871.1
L546 57 years, male, stage:Stage IA, dead, 973 days 6868.6
L566 58 years, male, stage:Stage IB, alive, 2489 days 6846.7
L439 80 years, male, stage:Stage IIB, dead, 2773 days 6379.1
L617 68 years, male, stage:Stage IIIA, dead, 238 days 6284.9
L531 74 years, male, stage:Stage IB, dead, 928 days 6263.6
L605 74 years, female, stage:Stage IA, alive, 2460 days 6263.0
L682 64 years, female, stage:Stage IIB, dead, 840 days 6226.4
L689 69 years, male, stage:Stage IA, alive, 1943 days 6212.9
L663 62 years, female, stage:Stage IB, alive, 2018 days 6199.3
L603 70 years, female, stage:Stage IB, dead, 972 days 6183.7
L458 76 years, female, stage:Stage IA, dead, 223 days 6149.6
L596 74 years, female, stage:Stage IA, alive, 2319 days 5854.1
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 5769.6
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 5583.3
L885 62 years, female, stage:Stage IA, alive, 1618 days 5574.3
L565 59 years, female, stage:Stage IB, dead, 543 days 5554.8
L816 73 years, female, stage:Stage IIA, dead, 353 days 5554.2
L871 74 years, male, stage:Stage IB, dead, 873 days 5550.5
L879 75 years, male, stage:Stage IV, dead, 873 days 5523.8
L731 59 years, female, stage:Stage IA, dead, 964 days 5420.3
L768 60 years, male, stage:Stage IIIA, dead, 472 days 5385.8
L601 75 years, male, stage:Stage IB, dead, 2068 days 5371.7
L557 81 years, female, stage:Stage IB, alive, 2580 days 5363.5
L493 56 years, female, stage:Stage IIB, alive, 2945 days 5271.5
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 5209.1
L826 45 years, female, stage:Stage IV, dead, 935 days 5131.4
L867 62 years, female, stage:Stage IIIA, dead, 317 days 5129.5
L749 49 years, female, stage:Stage IIIA, dead, 189 days 5127.1
L569 76 years, female, stage:Stage IA, alive, 2531 days 5082.5
L808 48 years, female, stage:Stage IA, alive, 3001 days 5013.5
L593 78 years, male, stage:Stage IA, dead, 2436 days 4991.8
L877 70 years, female, stage:Stage IA, alive, 1599 days 4847.9
L710 72 years, female, stage:Stage IIA, alive, 1775 days 4822.7
L890 56 years, female, stage:Stage IIB, dead, 1264 days 4819.7
L695 68 years, female, stage:Stage IB, dead, 1762 days 4803.8
L791 66 years, female, stage:Stage IIIA, dead, 368 days 4764.4
L413 72 years, female, stage:Stage IIIA, dead, 313 days 4759.1
L738 74 years, female, stage:Stage IB, dead, 1314 days 4679.2
L875 69 years, female, stage:Stage IA, alive, 1675 days 4631.6
L673 74 years, female, stage:Stage IA, dead, 568 days 4590.7
L865 75 years, female, stage:Stage IIB, alive, 1927 days 4575.1
L746 64 years, female, stage:Stage IIIA, dead, 594 days 4502.7
L782 73 years, female, stage:Stage IIB, alive, 3371 days 4489.4
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 4467.0
L530 76 years, female, stage:Stage IIA, dead, 308 days 4395.0
L446 71 years, female, stage:Stage IIB, dead, 415 days 4390.2
L620 70 years, female, stage:Stage IIIA, dead, 338 days 4323.4
L678 65 years, female, stage:Stage IB, dead, 1114 days 4275.9
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 4253.7
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 4244.0
L778 65 years, female, stage:Stage IA, alive, 1600 days 4141.6
L688 57 years, male, stage:Stage IIIA, dead, 789 days 4103.4
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 4051.9
L800 66 years, female, stage:Stage IA, dead, 2417 days 4042.6
L638 65 years, male, stage:Stage IA, alive, 2076 days 4035.3
L455 52 years, female, stage:Stage IA, alive, 3315 days 4032.2
L832 65 years, female, stage:Stage IA, alive, 2145 days 4017.5
L656 58 years, male, stage:Stage IA, alive, 2227 days 3934.9
L606 55 years, male, stage:Stage IA, alive, 2336 days 3892.8
L626 76 years, female, stage:Stage IA, dead, 1994 days 3875.0
L404 74 years, female, stage:Stage IIA, dead, 2318 days 3837.9
L838 71 years, female, stage:Stage IA, dead, 1005 days 3799.5
L887 77 years, male, stage:Stage IA, dead, 374 days 3771.9
L599 80 years, male, stage:Stage IB, dead, 2083 days 3739.3
L735 75 years, female, stage:Stage IA, alive, 1830 days 3627.0
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 3625.9
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 3603.2
L872 71 years, female, stage:Stage IA, alive, 1793 days 3589.3
L810 64 years, female, stage:Stage IIIA, dead, 625 days 3499.7
L602 69 years, female, stage:Stage IA, alive, 2277 days 3470.4
L766 59 years, male, stage:Stage IB, alive, 1793 days 3445.6
L873 62 years, female, stage:Stage IA, alive, 1740 days 3404.2
L802 62 years, female, stage:Stage IA, dead, 773 days 3293.2
L585 70 years, female, stage:Stage IIA, dead, 402 days 3221.5
L541 70 years, female, stage:Stage IIIA, dead, 915 days 3219.6
L400 78 years, male, stage:Stage IIA, dead, 1233 days 3190.1
L828 68 years, female, stage:Stage IIB, alive, 2222 days 3168.6
L484 64 years, female, stage:Stage IA, alive, 2895 days 3159.2
L831 62 years, female, stage:Stage IB, alive, 2152 days 3090.5
L440 80 years, male, stage:Stage IIB, dead, 651 days 3068.4
L725 64 years, female, stage:Stage IA, alive, 1830 days 2847.9
L543 65 years, male, stage:Stage IA, alive, 2711 days 2838.2
L607 59 years, male, stage:Stage IB, alive, 2572 days 2815.1
L545 60 years, female, stage:Stage IA, alive, 2874 days 2564.4
L728 77 years, male, stage:Stage IIB, dead, 1128 days 2460.6
L880 75 years, female, stage:Stage IA, alive, 1767 days 2390.8
L504 65 years, female, stage:Stage IA, dead, 1295 days 2029.6
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS18 is potential prognostic, high expression is favorable in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 7997.5
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6558.4
Number of samples 489
Samples
Sample Description pTPM
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 62322.9
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 36420.6
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 24019.5
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 23820.9
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 22194.8
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 22171.1
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 21537.9
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 21042.4
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 20033.6
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 19798.6
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 19318.5
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 19220.8
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 17797.1
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 17061.5
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 16481.2
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 16194.6
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 16184.7
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 16167.6
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 16086.2
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 15810.9
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 15473.3
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 14424.3
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 14411.7
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 14376.5
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 13946.2
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 13167.3
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 12656.2
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 12512.8
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 12492.4
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 12457.9
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 12364.6
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 12279.8
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 11963.3
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 11951.2
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 11925.6
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 11846.8
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 11826.3
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 11823.1
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 11760.1
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 11716.1
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 11625.6
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 11570.1
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 11464.1
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 11422.7
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 11420.4
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 11329.8
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 11242.2
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 10962.4
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 10960.3
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 10898.0
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 10815.4
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 10720.1
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 10664.3
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 10600.9
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 10515.1
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 10489.0
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 10477.6
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 10126.4
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 10061.5
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 10032.9
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 10021.5
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 10015.0
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 9985.9
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 9881.9
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 9822.5
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 9797.4
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 9774.1
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 9731.5
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 9629.7
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 9419.9
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 9302.0
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 9300.0
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 9281.0
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 9265.1
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 9251.1
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 9238.7
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 9205.4
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 9124.4
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 9077.9
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 9027.4
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 9012.3
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 8977.7
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 8950.9
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 8938.9
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 8910.8
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 8884.5
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 8863.5
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 8861.9
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 8852.0
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 8849.5
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 8791.8
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 8715.2
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 8628.9
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 8611.7
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 8560.5
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 8555.7
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 8542.9
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 8489.9
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 8471.2
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 8442.1
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 8426.6
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 8408.9
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 8404.0
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 8387.9
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 8380.1
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 8366.3
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 8305.5
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 8248.0
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 8235.7
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 8169.6
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 8169.4
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 8149.9
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 8139.5
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 8054.8
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 8031.9
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 8028.2
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 8007.6
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 7998.0
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 7997.5
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 7970.9
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 7966.1
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 7955.9
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 7938.1
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 7911.1
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 7884.4
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 7840.1
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 7815.2
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 7803.2
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 7797.9
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 7797.8
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 7790.2
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 7778.4
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 7768.3
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 7748.5
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 7741.2
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 7713.4
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 7706.2
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 7701.7
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 7672.9
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 7461.6
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 7459.6
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 7396.2
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 7381.7
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 7342.5
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 7330.3
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 7303.7
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 7289.7
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 7207.5
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 7154.0
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 7120.7
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 7117.4
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 7067.7
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 7048.3
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 6983.1
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 6971.8
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 6971.5
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 6955.8
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 6915.9
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 6911.2
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 6899.8
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 6878.1
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 6864.7
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 6863.7
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 6838.3
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 6813.4
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 6759.1
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 6721.6
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 6693.9
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 6688.2
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 6646.3
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 6641.8
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 6632.1
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 6607.0
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 6604.7
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 6596.9
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 6576.7
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 6558.8
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 6532.5
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 6483.1
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 6405.3
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 6398.9
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 6386.7
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 6366.1
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 6340.9
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 6329.6
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 6311.8
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 6297.2
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 6287.4
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 6277.2
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 6248.0
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 6243.9
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 6239.9
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 6203.2
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 6194.7
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 6186.5
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 6184.7
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 6175.5
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 6171.6
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 6150.2
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 6148.3
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 6141.5
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 6141.1
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 6138.8
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 6118.7
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 6113.2
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 6077.3
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 6047.8
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 6039.8
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 6016.9
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 6016.7
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 6015.9
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 5973.5
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 5959.4
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 5953.0
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 5948.9
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 5937.7
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 5912.5
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 5840.5
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 5794.3
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 5781.2
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 5772.8
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 5767.0
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 5753.4
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 5752.3
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 5746.4
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 5743.9
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 5663.3
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 5643.6
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 5606.8
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 5599.9
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 5598.5
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 5586.6
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 5572.1
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 5571.8
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 5569.2
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 5542.1
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 5507.0
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 5494.5
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 5481.8
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 5471.1
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 5439.4
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 5408.2
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 5407.3
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 5401.0
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 5393.0
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 5367.4
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 5362.2
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 5355.8
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 5328.6
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 5304.5
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 5300.9
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 5274.1
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 5246.1
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 5243.7
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 5212.5
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 5209.3
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 5206.8
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 5192.6
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 5164.8
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 5156.1
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 5153.0
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 5149.1
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 5140.6
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 5140.2
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 5138.5
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 5119.0
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 5118.0
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 5115.1
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 5114.8
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 5105.9
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 5100.4
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 5099.4
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 5079.7
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 5069.0
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 5059.3
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 5057.7
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 5035.1
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 5023.6
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 5016.9
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 4995.9
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 4967.3
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 4935.4
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 4930.9
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 4928.8
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 4910.2
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 4900.2
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 4872.1
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 4868.1
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 4854.7
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 4834.5
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 4830.3
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 4814.3
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 4812.3
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 4805.2
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 4792.1
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 4777.4
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 4759.5
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 4753.4
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 4751.2
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 4734.6
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 4722.7
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 4716.3
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 4699.5
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 4696.8
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 4642.5
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 4629.2
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 4612.1
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 4611.1
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 4605.5
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 4573.7
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 4565.6
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 4559.7
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 4542.7
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 4529.7
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 4524.6
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 4522.7
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 4520.7
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 4498.1
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 4487.5
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 4464.0
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 4463.1
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 4462.0
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 4461.1
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 4460.4
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 4446.2
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 4443.2
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 4436.0
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 4430.8
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 4426.9
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 4423.7
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 4419.9
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 4413.7
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 4411.3
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 4409.1
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 4378.2
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 4363.8
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 4340.8
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 4328.5
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 4326.2
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 4300.9
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 4291.5
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 4283.4
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 4277.9
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 4260.6
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 4260.1
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 4255.3
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 4235.0
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 4233.2
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 4204.8
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 4201.1
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 4176.1
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 4166.2
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 4150.3
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 4126.1
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 4120.3
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 4117.8
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 4112.5
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 4074.9
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 4074.0
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 4058.5
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 4056.0
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 4042.2
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 4039.1
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 4016.7
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 4014.7
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 4009.5
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 4005.6
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 3996.8
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 3970.3
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3967.5
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 3959.5
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 3949.4
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 3947.4
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 3946.4
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 3923.0
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 3911.6
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 3909.7
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 3882.4
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 3862.2
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 3849.6
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 3822.4
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 3817.2
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 3772.1
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 3755.2
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 3750.0
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 3683.0
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 3675.8
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 3675.1
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 3658.0
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 3648.7
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 3648.1
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 3638.1
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 3637.9
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 3635.3
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 3580.1
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 3576.3
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 3574.0
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 3556.8
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 3503.0
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 3501.2
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 3487.4
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 3479.0
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 3465.0
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 3457.4
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 3453.3
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 3434.1
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 3424.2
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 3411.1
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 3363.7
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 3361.6
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 3348.7
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 3338.6
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 3332.7
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 3331.6
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 3324.5
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 3282.2
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 3280.5
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 3235.0
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 3231.0
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 3228.6
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 3227.0
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 3226.7
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 3212.8
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 3196.4
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 3184.2
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 3178.6
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 3171.9
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 3169.2
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 3166.2
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3163.1
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 3148.8
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 3143.8
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 3129.0
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 3128.5
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 3117.0
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 3089.4
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 3054.0
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 3031.5
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 3030.7
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 3028.8
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 3018.9
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 3012.3
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 3009.9
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 3009.2
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 2970.5
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 2955.8
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 2940.2
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 2910.9
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 2875.2
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 2851.4
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 2847.6
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 2835.6
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 2812.2
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 2756.1
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2748.1
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 2739.3
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 2737.8
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 2697.2
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 2664.9
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 2641.5
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 2633.5
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 2601.4
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 2593.3
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 2562.9
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2545.0
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 2446.6
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 2411.0
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 2357.4
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 2355.9
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2355.0
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 2309.2
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 2272.7
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 2256.5
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 2251.3
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2238.2
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 2222.5
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 2217.2
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 2187.1
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 2127.5
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 2121.4
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 2094.1
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 2086.5
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 2050.8
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 1977.9
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 1974.8
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 1963.9
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 1958.2
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 1803.0
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 1482.0
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPS18 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3605.82
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5066.7
Number of samples 68
Samples
Sample Description pTPM
L608 73 years, male, stage:Stage IA, alive, 2350 days 10308.7
L818 67 years, male, stage:Stage IB, alive, 2480 days 8565.1
L650 69 years, female, stage:Stage IB, dead, 986 days 8409.2
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 8001.3
L539 78 years, male, stage:Stage IB, dead, 370 days 7858.5
L592 61 years, male, stage:Stage IB, alive, 2368 days 7562.1
L854 62 years, female, stage:Stage IB, alive, 2256 days 7500.7
L739 49 years, female, stage:Stage IIIA, dead, 352 days 7083.9
L586 67 years, male, stage:Stage IIA, dead, 784 days 6907.4
L852 64 years, male, stage:Stage IB, dead, 700 days 6904.5
L857 69 years, male, stage:Stage IB, dead, 226 days 6874.7
L459 75 years, male, stage:Stage IIA, alive, 3181 days 6623.0
L604 67 years, male, stage:Stage IIA, dead, 286 days 6580.8
L468 53 years, male, stage:Stage IB, alive, 3004 days 6504.0
L457 46 years, female, stage:Stage IIA, alive, 2901 days 6338.4
L860 77 years, male, stage:Stage IA, alive, 2056 days 6294.9
L420 57 years, female, stage:Stage IIB, dead, 295 days 6252.1
L496 77 years, male, stage:Stage IB, alive, 2761 days 6203.9
L744 75 years, male, stage:Stage IA, alive, 1614 days 6028.8
L820 73 years, female, stage:Stage IA, alive, 2405 days 5943.1
L488 61 years, female, stage:Stage IIA, alive, 2993 days 5942.3
L563 61 years, female, stage:Stage IIB, dead, 1216 days 5933.8
L464 66 years, male, stage:Stage IB, dead, 1935 days 5878.9
L736 67 years, male, stage:Stage IA, dead, 1195 days 5829.7
L466 65 years, female, stage:Stage IIIA, dead, 412 days 5804.7
L753 61 years, male, stage:Stage IIA, alive, 1705 days 5794.7
L447 67 years, male, stage:Stage IIB, alive, 3203 days 5729.4
L864 66 years, female, stage:Stage IA, alive, 2192 days 5705.9
L568 77 years, female, stage:Stage IIB, dead, 71 days 5654.6
L559 72 years, male, stage:Stage IIB, alive, 2615 days 5557.9
L444 74 years, female, stage:Stage IIB, alive, 3337 days 5531.5
L715 69 years, female, stage:Stage IIIA, dead, 150 days 5291.0
L483 65 years, male, stage:Stage IB, dead, 77 days 5039.4
L633 77 years, female, stage:Stage IA, alive, 2102 days 4989.6
L824 70 years, male, stage:Stage IA, dead, 665 days 4767.9
L652 82 years, male, stage:Stage IA, dead, 5 days 4711.7
L685 71 years, female, stage:Stage IIB, alive, 1944 days 4687.3
L767 67 years, male, stage:Stage IA, alive, 1718 days 4667.7
L490 58 years, male, stage:Stage IA, dead, 716 days 4629.1
L856 69 years, male, stage:Stage IA, dead, 1465 days 4548.9
L881 70 years, male, stage:Stage IB, alive, 1752 days 4440.8
L644 67 years, male, stage:Stage IA, dead, 282 days 4428.7
L470 78 years, female, stage:Stage IB, dead, 1774 days 4408.1
L642 67 years, male, stage:Stage IB, dead, 1167 days 4390.1
L723 67 years, male, stage:Stage IIA, dead, 433 days 4343.2
L406 64 years, male, stage:Stage IA, alive, 3057 days 4203.8
L529 79 years, female, stage:Stage IA, alive, 2775 days 4134.0
L858 69 years, female, stage:Stage IIB, dead, 558 days 4116.8
L886 71 years, male, stage:Stage IB, dead, 1932 days 4013.6
L534 66 years, male, stage:Stage IIA, alive, 2693 days 4012.4
L758 84 years, male, stage:Stage IA, dead, 1562 days 3853.2
L661 66 years, male, stage:Stage IA, dead, 1123 days 3820.9
L655 62 years, male, stage:Stage IIA, dead, 1603 days 3767.1
L472 71 years, male, stage:Stage IB, dead, 423 days 3605.8
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 3373.7
L712 61 years, male, stage:Stage IA, alive, 1698 days 3243.8
L442 75 years, female, stage:Stage IB, dead, 2433 days 3181.6
L788 54 years, female, stage:Stage IA, alive, 3385 days 3026.2
L755 82 years, male, stage:Stage IIA, dead, 227 days 2850.8
L456 48 years, male, stage:Stage IIA, dead, 1660 days 2804.9
L747 74 years, female, stage:Stage IA, dead, 1112 days 2598.1
L658 65 years, female, stage:Stage IIB, alive, 2083 days 2594.7
L756 72 years, male, stage:Stage IB, alive, 1796 days 2513.2
L760 80 years, male, stage:Stage IIA, alive, 1895 days 2408.2
L572 58 years, male, stage:Stage IA, alive, 2532 days 2292.6
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 2279.1
L719 63 years, male, stage:Stage IB, alive, 1615 days 2218.4
L884 71 years, male, stage:Stage IIA, alive, 1627 days 2171.6
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0068800003 Tumor 0.9
CPT0090340003 Tumor 0.8
CPT0066780003 Tumor 0.8
CPT0117970003 Tumor 0.8
CPT0067450003 Tumor 0.7
CPT0011750003 Normal 0.7
CPT0118810003 Tumor 0.6
CPT0069360003 Tumor 0.6
CPT0001960003 Tumor 0.5
CPT0070060003 Tumor 0.5
CPT0092930003 Tumor 0.5
CPT0092530003 Tumor 0.5
CPT0118620003 Tumor 0.5
CPT0097580003 Tumor 0.5
CPT0001800013 Tumor 0.4
CPT0063810003 Tumor 0.4
CPT0118340003 Tumor 0.4
CPT0105270003 Tumor 0.4
CPT0014860003 Tumor 0.4
CPT0105940003 Tumor 0.4
CPT0008450003 Tumor 0.4
CPT0118200003 Tumor 0.3
CPT0113210003 Tumor 0.3
CPT0102450003 Tumor 0.3
CPT0084140003 Tumor 0.3
CPT0090170004 Tumor 0.3
CPT0053040004 Tumor 0.3
CPT0067070003 Tumor 0.3
CPT0105060003 Tumor 0.3
CPT0001060010 Tumor 0.3
CPT0082890003 Normal 0.3
CPT0000920017 Tumor 0.3
CPT0110980004 Tumor 0.2
CPT0001590003 Normal 0.2
CPT0091860003 Tumor 0.2
CPT0105230003 Tumor 0.2
CPT0147080004 Tumor 0.2
CPT0146980004 Tumor 0.2
CPT0090700003 Tumor 0.2
CPT0067250003 Tumor 0.2
CPT0113990003 Tumor 0.2
CPT0079830003 Tumor 0.2
CPT0106110003 Tumor 0.2
CPT0062810003 Normal 0.2
CPT0013600003 Tumor 0.2
CPT0105510003 Tumor 0.1
CPT0069520003 Tumor 0.1
CPT0001660013 Tumor 0.1
CPT0105630003 Tumor 0.1
CPT0067940003 Tumor 0.1
CPT0091870003 Normal 0.1
CPT0105710003 Tumor 0.1
CPT0102480003 Normal 0.1
CPT0118880003 Tumor 0.1
CPT0118890003 Normal 0.1
CPT0055100004 Tumor 0.1
CPT0098130003 Tumor 0.1
CPT0011710004 Tumor 0.1
CPT0001580009 Tumor 0.1
CPT0125810003 Tumor 0.1
CPT0067110003 Normal 0.1
CPT0148180004 Tumor 0.1
CPT0082850004 Tumor 0.1
CPT0052940004 Tumor 0.1
CPT0015420003 Normal 0.1
CPT0083780003 Tumor 0.1
CPT0092250003 Normal 0.1
CPT0148300003 Normal 0.1
CPT0082770003 Normal 0.1
CPT0091240003 Tumor 0.1
CPT0118240003 Normal 0.0
CPT0067620003 Tumor 0.0
CPT0090200003 Normal 0.0
CPT0083100003 Tumor 0.0
CPT0147600003 Normal 0.0
CPT0083420003 Normal 0.0
CPT0112060003 Tumor 0.0
CPT0090860003 Tumor 0.0
CPT0147000003 Normal 0.0
CPT0067950003 Normal 0.0
CPT0105010004 Normal 0.0
CPT0021450003 Tumor 0.0
CPT0113220003 Normal 0.0
CPT0089360003 Normal 0.0
CPT0109850003 Normal 0.0
CPT0105740003 Normal 0.0
CPT0147100003 Normal 0.0
CPT0148200003 Normal 0.0
CPT0083140003 Normal 0.0
CPT0118160003 Tumor 0.0
CPT0014260003 Tumor 0.0
CPT0146800003 Normal 0.0
CPT0086770003 Normal 0.0
CPT0105600003 Tumor 0.0
CPT0146700003 Normal -0.1
CPT0089340003 Tumor -0.1
CPT0068610003 Tumor -0.1
CPT0148100003 Normal -0.1
CPT0086750003 Tumor -0.1
CPT0090570004 Tumor -0.1
CPT0105550003 Normal -0.1
CPT0082740004 Tumor -0.1
CPT0105680003 Normal -0.1
CPT0125830003 Normal -0.1
CPT0147400003 Normal -0.1
CPT0001390003 Normal -0.1
CPT0090370003 Normal -0.1
CPT0069370003 Normal -0.1
CPT0105330003 Tumor -0.1
CPT0051690004 Tumor -0.1
CPT0114690003 Normal -0.1
CPT0097600003 Normal -0.1
CPT0109760003 Normal -0.1
CPT0086320003 Normal -0.1
CPT0109740004 Tumor -0.1
CPT0105190003 Normal -0.1
CPT0146780004 Tumor -0.1
CPT0104650003 Normal -0.1
CPT0147500003 Normal -0.1
CPT0063750003 Normal -0.1
CPT0015410003 Tumor -0.1
CPT0105250003 Normal -0.1
CPT0104760003 Normal -0.1
CPT0147880004 Tumor -0.1
CPT0008420003 Normal -0.1
CPT0090720003 Normal -0.1
CPT0023310003 Tumor -0.1
CPT0069700003 Tumor -0.1
CPT0147480004 Tumor -0.2
CPT0104750003 Tumor -0.2
CPT0092940003 Normal -0.2
CPT0148000003 Normal -0.2
CPT0111590003 Normal -0.2
CPT0001070003 Normal -0.2
CPT0109700003 Normal -0.2
CPT0013630003 Normal -0.2
CPT0112080003 Normal -0.2
CPT0000930003 Normal -0.2
CPT0146680004 Tumor -0.2
CPT0066890003 Tumor -0.2
CPT0013910003 Normal -0.2
CPT0084170003 Normal -0.2
CPT0118360003 Normal -0.2
CPT0104630003 Tumor -0.2
CPT0146600003 Normal -0.2
CPT0070080003 Normal -0.2
CPT0106100003 Normal -0.2
CPT0068830003 Normal -0.2
CPT0068650003 Normal -0.2
CPT0111480003 Normal -0.2
CPT0147900003 Normal -0.2
CPT0104970003 Tumor -0.2
CPT0105610003 Normal -0.2
CPT0069550003 Normal -0.3
CPT0068130003 Normal -0.3
CPT0067470004 Normal -0.3
CPT0118650003 Normal -0.3
CPT0001970003 Normal -0.3
CPT0067770003 Normal -0.3
CPT0118600003 Normal -0.3
CPT0147980004 Tumor -0.3
CPT0115070003 Tumor -0.3
CPT0086310003 Tumor -0.3
CPT0109680004 Tumor -0.3
CPT0091260003 Normal -0.3
CPT0110890003 Normal -0.3
CPT0147380004 Tumor -0.3
CPT0114840003 Tumor -0.3
CPT0013880003 Tumor -0.3
CPT0118830003 Normal -0.3
CPT0118570003 Tumor -0.3
CPT0066930003 Normal -0.3
CPT0105370004 Normal -0.3
CPT0014930003 Normal -0.3
CPT0114010003 Normal -0.3
CPT0063730003 Tumor -0.3
CPT0063840003 Normal -0.4
CPT0052170004 Tumor -0.4
CPT0109710003 Normal -0.4
CPT0090600003 Normal -0.4
CPT0146880004 Tumor -0.4
CPT0068100003 Tumor -0.4
CPT0014290003 Normal -0.4
CPT0001380003 Tumor -0.4
CPT0105980003 Normal -0.4
CPT0067290003 Normal -0.4
CPT0090900004 Normal -0.4
CPT0066810003 Normal -0.4
CPT0023320003 Normal -0.4
CPT0111300003 Tumor -0.4
CPT0092240003 Tumor -0.4
CPT0114660004 Tumor -0.4
CPT0118180003 Normal -0.5
CPT0115090003 Normal -0.5
CPT0021490003 Normal -0.5
CPT0001690003 Normal -0.5
CPT0114880003 Normal -0.5
CPT0011930003 Normal -0.5
CPT0083390004 Tumor -0.5
CPT0001810003 Normal -0.6
CPT0079850003 Normal -0.6
CPT0109720004 Tumor -0.6
CPT0110860004 Tumor -0.6
CPT0011910004 Tumor -0.6
CPT0109830004 Tumor -0.6
CPT0147580004 Tumor -0.7
CPT0008410003 Tumor -0.7
CPT0118010003 Normal -0.7
CPT0083810003 Normal -0.7
CPT0148280004 Tumor -0.8
CPT0069720003 Normal -1.1
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0191860003 Tumor 0.7
CPT0191710003 Tumor 0.6
CPT0186130003 Tumor 0.6
CPT0245830003 Tumor 0.6
CPT0146480004 Tumor 0.5
CPT0237690004 Tumor 0.5
CPT0195510003 Tumor 0.5
CPT0068280003 Tumor 0.5
CPT0237200004 Tumor 0.5
CPT0105420003 Tumor 0.5
CPT0091820003 Tumor 0.5
CPT0238110004 Tumor 0.5
CPT0209490003 Tumor 0.5
CPT0147680004 Tumor 0.5
CPT0204990003 Tumor 0.5
CPT0146380004 Tumor 0.4
CPT0202170003 Tumor 0.4
CPT0090440003 Tumor 0.4
CPT0197090003 Tumor 0.4
CPT0087190003 Tumor 0.4
CPT0115830003 Tumor 0.4
CPT0223790003 Tumor 0.4
CPT0102790003 Tumor 0.4
CPT0175390003 Tumor 0.4
CPT0175120003 Tumor 0.4
CPT0117720003 Tumor 0.4
CPT0091050003 Tumor 0.4
CPT0183250004 Tumor 0.4
CPT0236420003 Tumor 0.4
CPT0086260003 Tumor 0.4
CPT0126530003 Tumor 0.4
CPT0208770003 Tumor 0.3
CPT0001020003 Tumor 0.3
CPT0136640003 Tumor 0.3
CPT0112540003 Tumor 0.3
CPT0079050003 Tumor 0.3
CPT0130270003 Tumor 0.3
CPT0202020008 Tumor 0.3
CPT0221200003 Tumor 0.3
CPT0196810003 Tumor 0.3
CPT0202530004 Tumor 0.3
CPT0233320003 Tumor 0.3
CPT0079100003 Tumor 0.2
CPT0192540004 Tumor 0.2
CPT0130030003 Tumor 0.2
CPT0083980003 Tumor 0.2
CPT0197150003 Tumor 0.2
CPT0237970004 Tumor 0.2
CPT0217420003 Tumor 0.2
CPT0237760003 Tumor 0.2
CPT0237550004 Tumor 0.2
CPT0218280003 Tumor 0.2
CPT0186180003 Tumor 0.2
CPT0197740003 Tumor 0.2
CPT0007740003 Tumor 0.2
CPT0233120003 Tumor 0.2
CPT0221650003 Tumor 0.2
CPT0234930004 Tumor 0.2
CPT0209020004 Tumor 0.2
CPT0126390003 Tumor 0.2
CPT0204800003 Tumor 0.2
CPT0175260003 Tumor 0.2
CPT0130410003 Tumor 0.2
CPT0063430003 Tumor 0.2
CPT0175560003 Tumor 0.2
CPT0237060004 Tumor 0.1
CPT0104360003 Tumor 0.1
CPT0225380003 Tumor 0.1
CPT0227400003 Tumor 0.1
CPT0232670003 Tumor 0.1
CPT0223820003 Normal 0.1
CPT0128890003 Tumor 0.1
CPT0219360003 Tumor 0.1
CPT0237410004 Tumor 0.1
CPT0136660003 Normal 0.1
CPT0063480003 Tumor 0.1
CPT0126810003 Tumor 0.1
CPT0104930003 Tumor 0.1
CPT0064040003 Tumor 0.1
CPT0234790003 Tumor 0.1
CPT0112650003 Tumor 0.1
CPT0207210003 Tumor 0.1
CPT0126830003 Normal 0.1
CPT0202350004 Tumor 0.1
CPT0069890003 Tumor 0.1
CPT0126740003 Tumor 0.1
CPT0112720003 Tumor 0.1
CPT0197210003 Tumor 0.1
CPT0023470003 Tumor 0.0
CPT0241170003 Tumor 0.0
CPT0112580003 Tumor 0.0
CPT0175410003 Normal 0.0
CPT0202720003 Tumor 0.0
CPT0205000003 Normal 0.0
CPT0111150004 Tumor 0.0
CPT0190550003 Tumor 0.0
CPT0098770003 Tumor 0.0
CPT0089880003 Tumor 0.0
CPT0234560003 Tumor 0.0
CPT0147180004 Tumor 0.0
CPT0098800003 Normal -0.1
CPT0233600003 Tumor -0.1
CPT0245780003 Tumor -0.1
CPT0112600003 Normal -0.1
CPT0221220003 Normal -0.1
CPT0101130003 Tumor -0.1
CPT0126470003 Normal -0.1
CPT0115860003 Normal -0.1
CPT0197860003 Normal -0.1
CPT0237210003 Normal -0.1
CPT0245880003 Tumor -0.1
CPT0126400003 Normal -0.1
CPT0197380003 Normal -0.1
CPT0192590004 Normal -0.1
CPT0202220004 Normal -0.2
CPT0108560003 Tumor -0.2
CPT0186210003 Normal -0.2
CPT0010060003 Normal -0.2
CPT0147700003 Normal -0.2
CPT0130440004 Normal -0.2
CPT0222730003 Tumor -0.2
CPT0123350003 Tumor -0.2
CPT0227420003 Normal -0.2
CPT0175270003 Normal -0.2
CPT0126670003 Tumor -0.2
CPT0063440003 Normal -0.2
CPT0221660003 Normal -0.2
CPT0195520003 Normal -0.2
CPT0064050003 Normal -0.2
CPT0218310003 Normal -0.2
CPT0112730003 Normal -0.2
CPT0204600003 Tumor -0.2
CPT0126450003 Tumor -0.2
CPT0238130003 Normal -0.2
CPT0237780003 Normal -0.2
CPT0123370003 Normal -0.2
CPT0111000004 Normal -0.2
CPT0236430003 Normal -0.3
CPT0225470003 Normal -0.3
CPT0191930003 Normal -0.3
CPT0091610003 Tumor -0.3
CPT0245890003 Normal -0.3
CPT0108600003 Normal -0.3
CPT0232690003 Normal -0.3
CPT0086270003 Normal -0.3
CPT0146500003 Normal -0.3
CPT0010050003 Tumor -0.3
CPT0234580003 Normal -0.3
CPT0197170003 Normal -0.3
CPT0222740003 Normal -0.3
CPT0105430003 Normal -0.3
CPT0187370003 Tumor -0.3
CPT0191750003 Normal -0.3
CPT0112660003 Normal -0.3
CPT0146400003 Normal -0.3
CPT0202740003 Normal -0.3
CPT0079110003 Normal -0.4
CPT0237710003 Normal -0.4
CPT0126760003 Normal -0.4
CPT0104380003 Normal -0.4
CPT0130070003 Normal -0.4
CPT0079060003 Normal -0.4
CPT0217490003 Normal -0.4
CPT0233160003 Normal -0.4
CPT0209510003 Normal -0.4
CPT0023500003 Normal -0.4
CPT0001030003 Normal -0.4
CPT0202400004 Normal -0.4
CPT0245790003 Normal -0.4
CPT0209040003 Normal -0.4
CPT0102840003 Normal -0.4
CPT0234820003 Normal -0.4
CPT0207250003 Normal -0.4
CPT0219390003 Normal -0.4
CPT0091620003 Normal -0.4
CPT0091090003 Normal -0.5
CPT0196820003 Normal -0.5
CPT0227020003 Tumor -0.5
CPT0187380003 Normal -0.5
CPT0007760003 Normal -0.5
CPT0233640003 Normal -0.5
CPT0112550003 Normal -0.5
CPT0197100003 Normal -0.5
CPT0204660003 Normal -0.5
CPT0130310003 Normal -0.5
CPT0237080003 Normal -0.5
CPT0241210003 Normal -0.5
CPT0202580004 Normal -0.5
CPT0237570003 Normal -0.5
CPT0128900003 Normal -0.5
CPT0202040003 Normal -0.5
CPT0175160003 Normal -0.6
CPT0063500003 Normal -0.6
CPT0233330003 Normal -0.6
CPT0245840003 Normal -0.6
CPT0208780003 Normal -0.6
CPT0197520003 Normal -0.6
CPT0147200003 Normal -0.6
CPT0068320003 Normal -0.6
CPT0204820003 Normal -0.6
CPT0183270003 Normal -0.6
CPT0237430003 Normal -0.6
CPT0186140003 Normal -0.7
CPT0087210003 Normal -0.7
CPT0083990003 Normal -0.7
CPT0234950004 Normal -0.7
CPT0104950003 Normal -0.8
CPT0227070003 Normal -0.8
CPT0237990003 Normal -0.9
CPT0197480003 Tumor -1.0
CPT0117770003 Normal -1.0
CPT0069900003 Normal -1.3
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA050159
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS

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