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RPS28
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:139.1 nTPM
FANTOM5:6.8 Scaled Tags Per Million
Pig:658.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047132
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 139.1
Samples: 246

Max nTPM: 306.4
Min nTPM: 46.6
Std nTPM: 45.3
Median nTPM: 134.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 306.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 298.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 294.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 284.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 274.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 247.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 239.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 234.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 232.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 223.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 222.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 221.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 221.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 215.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 215.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 214.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 212.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 210.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 209.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 208.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 206.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 204.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 201.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 200.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 199.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 195.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 193.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 192.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 192.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 189.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 186.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 185.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 184.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 183.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 182.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 181.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 180.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 179.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 177.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 177.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 177.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 176.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 175.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 174.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 174.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 174.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 173.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 172.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 171.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 170.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 169.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 169.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 167.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 166.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 165.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 165.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 164.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 164.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 163.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 163.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 162.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 162.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 161.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 160.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 159.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 159.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 158.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 158.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 158.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 156.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 156.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 155.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 155.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 154.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 154.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 153.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 153.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 152.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 151.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 150.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 150.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 149.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 149.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 149.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 149.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 149.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 148.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 148.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 148.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 148.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 147.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 147.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 147.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 147.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 146.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 146.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 146.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 144.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 144.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 144.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 144.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 143.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 143.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 143.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 142.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 142.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 141.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 140.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 140.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 140.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 139.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 138.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 137.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 137.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 137.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 137.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 136.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 136.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 135.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 134.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 134.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 133.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 133.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 131.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 131.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 131.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 131.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 130.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 130.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 130.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 130.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 128.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 127.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 127.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 127.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 126.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 126.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 125.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 124.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 123.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 123.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 123.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 122.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 122.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 122.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 122.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 122.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 122.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 121.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 121.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 121.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 119.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 119.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 119.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 118.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 118.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 117.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 116.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 115.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 113.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 113.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 112.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 112.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 112.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 111.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 110.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 110.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 110.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 110.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 110.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 110.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 109.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 109.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 109.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 108.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 108.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 108.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 107.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 106.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 105.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 105.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 104.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 103.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 103.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 102.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 102.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 101.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 101.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 101.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 100.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 99.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 97.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 96.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 96.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 96.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 96.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 95.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 95.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 95.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 94.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 94.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 94.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 92.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 92.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 92.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 89.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 89.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 88.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 84.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 84.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 84.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 83.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 82.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 82.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 81.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 80.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 80.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 78.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 78.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 77.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 77.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 75.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 72.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 72.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 72.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 72.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 72.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 70.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 64.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 53.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 48.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 46.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 6.8
FF:10164-103B2 76 years, female 6.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

658.1
Pig sample Sample description nTPM
Caudate
nTPM: 658.2
Samples: 4

Max nTPM: 714.7
Min nTPM: 601.2
Sample A Female 601.2
Sample B Female 702.9
Sample C Male 714.7
Sample D Male 613.8

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