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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:555.4 nTPM
GTEx:555.4 nTPM
FANTOM5:919.3 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB015418
Squamous epithelial cells Medium

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

555.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 555.4
Samples: 156

Max nTPM: 1181.5
Min nTPM: 191.4
Std nTPM: 212.6
Median nTPM: 508.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1181.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1149.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1131.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1129.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1052.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1039.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1018.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1009.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 983.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 949.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 915.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 899.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 892.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 890.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 883.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 883.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 832.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 825.3
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 819.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 810.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 810.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 790.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 790.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 789.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 785.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 777.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 761.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 759.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 736.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 730.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 721.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 717.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 717.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 697.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 694.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 692.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 679.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 678.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 676.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 676.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 667.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 661.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 660.8
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 658.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 649.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 649.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 645.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 643.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 639.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 628.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 612.2
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 611.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 610.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 609.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 602.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 597.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 597.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 595.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 586.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 584.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 575.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 571.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 569.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 551.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 549.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 546.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 544.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 540.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 533.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 527.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 526.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 521.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 520.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 519.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 512.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 511.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 509.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 508.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 508.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 507.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 501.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 498.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 488.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 488.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 488.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 484.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 484.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 482.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 481.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 480.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 477.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 476.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 475.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 475.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 470.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 470.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 464.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 461.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 458.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 451.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 450.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 450.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 445.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 443.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 442.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 434.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 433.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 425.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 425.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 424.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 422.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 416.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 412.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 411.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 410.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 406.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 404.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 401.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 400.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 399.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 396.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 395.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 395.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 383.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 383.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 380.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 374.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 370.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 366.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 366.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 360.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 356.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 353.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 353.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 352.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 344.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 341.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 327.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 326.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 323.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 320.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 317.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 308.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 300.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 297.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 289.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 278.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 272.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 269.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 257.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 249.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 247.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 218.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 202.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 200.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 191.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

919.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 919.3
FF:10204-103F6 68 years, female 919.3

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