Expression of ATP5MF in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

ATP5MF is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 676.91

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

756.7

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	4431.8
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	2391.9
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	1940.1
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	1828.7
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	1711.2
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	1709.1
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	1682.6
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	1656.9
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	1653.3
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	1530.5
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	1529.9
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	1512.9
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	1490.8
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	1481.4
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	1461.0
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	1456.3
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	1454.2
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	1438.2
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	1432.2
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	1394.7
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1337.2
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	1295.7
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	1289.8
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	1283.4
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	1278.8
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	1269.1
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	1250.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	1241.9
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	1225.8
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	1206.2
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	1191.1
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	1189.5
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	1187.6
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	1186.2
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	1179.4
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	1174.9
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	1166.7
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	1158.6
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1156.3
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	1140.3
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	1116.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	1104.4
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	1089.1
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	1087.8
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	1086.5
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	1085.9
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	1084.6
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	1068.0
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	1064.4
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	1064.2
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	1052.2
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	1050.9
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	1050.6
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	1044.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	1043.0
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	1038.9
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	1037.9
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	1034.4
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	1033.9
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	1029.3
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	1025.3
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	1025.2
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	1022.1
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	1018.0
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	1016.8
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	993.4
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	988.7
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	987.5
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	974.1
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	971.6
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	964.7
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	960.4
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	955.1
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	942.9
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	938.7
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	936.9
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	930.5
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	930.3
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	926.4
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	925.8
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	925.7
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	917.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	915.1
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	913.5
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	912.1
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	909.8
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	909.2
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	898.8
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	896.7
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	896.2
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	892.1
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	890.9
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	890.8
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	890.1
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	887.3
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	886.4
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	885.3
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	876.1
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	874.8
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	873.7
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	869.6
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	867.6
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	866.8
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	863.1
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	860.1
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	859.3
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	858.8
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	857.8
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	843.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	840.9
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	838.6
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	828.9
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	816.2
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	815.4
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	807.0
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	804.1
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	800.5
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	799.5
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	798.7
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	798.0
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	787.4
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	786.4
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	785.9
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	784.9
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	784.1
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	783.2
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	780.7
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	777.4
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	776.6
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	773.9
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	769.1
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	766.9
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	762.7
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	762.4
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	761.4
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	759.8
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	758.0
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	755.4
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	752.7
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	752.0
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	751.9
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	748.4
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	748.4
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	748.0
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	745.8
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	745.4
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	745.4
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	743.8
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	742.8
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	742.3
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	740.9
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	737.1
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	722.5
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	719.9
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	717.9
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	717.9
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	717.6
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	717.2
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	717.0
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	708.7
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	705.1
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	699.1
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	696.8
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	695.1
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	693.1
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	692.2
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	690.5
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	690.1
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	689.2
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	688.9
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	688.7
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	688.0
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	685.4
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	681.9
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	679.6
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	677.9
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	677.2
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	676.6
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	674.9
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	674.6
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	672.5
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	671.4
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	666.7
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	665.6
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	664.4
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	664.0
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	663.4
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	660.6
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	658.5
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	657.1
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	654.6
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	651.9
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	649.5
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	648.5
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	647.2
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	645.3
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	645.3
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	645.0
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	642.7
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	642.4
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	641.7
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	638.0
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	637.9
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	637.6
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	637.2
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	633.7
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	633.2
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	630.9
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	625.4
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	623.9
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	622.3
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	622.3
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	621.7
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	621.1
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	620.9
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	620.6
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	620.3
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	614.6
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	612.8
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	609.5
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	607.8
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	607.5
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	606.6
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	601.2
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	599.1
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	597.0
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	593.7
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	592.0
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	590.0
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	588.6
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	587.4
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	585.5
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	584.7
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	584.4
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	583.5
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	583.2
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	582.1
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	582.0
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	581.0
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	580.5
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	580.1
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	580.1
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	579.9
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	578.6
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	575.2
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	572.7
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	571.8
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	570.5
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	569.6
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	569.4
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	569.1
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	560.7
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	559.4
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	555.0
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	554.1
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	552.3
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	551.1
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	549.7
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	549.2
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	546.6
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	546.4
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	545.2
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	543.7
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	538.9
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	537.6
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	537.2
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	534.9
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	533.4
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	533.1
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	532.8
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	532.0
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	531.1
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	530.0
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	529.7
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	529.0
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	528.8
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	527.7
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	527.4
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	526.2
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	525.1
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	524.8
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	521.9
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	517.7
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	516.3
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	515.3
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	514.8
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	514.1
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	513.3
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	512.5
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	510.4
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	509.1
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	508.8
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	507.2
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	507.1
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	504.7
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	504.5
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	501.4
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	499.4
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	497.1
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	496.7
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	496.3
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	494.2
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	493.4
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	493.2
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	490.0
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	486.7
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	475.3
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	474.8
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	474.5
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	472.7
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	471.8
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	468.6
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	468.0
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	467.2
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	465.1
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	462.9
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	462.8
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	455.2
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	450.7
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	450.4
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	448.8
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	448.4
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	445.3
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	444.9
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	442.3
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	440.1
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	439.6
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	434.7
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	433.2
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	430.9
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	424.6
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	418.5
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	417.8
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	415.0
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	414.4
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	414.0
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	412.9
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	412.9
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	410.7
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	408.6
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	407.8
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	404.6
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	397.9
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	385.9
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	383.9
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	380.6
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	376.1
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	375.2
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	372.7
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	362.5
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	352.4
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	343.8
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	331.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	330.8
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	324.7
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	321.0
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	317.8
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	317.6
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	263.4
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	255.9
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	249.7
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	246.8
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
627	Tumor	1.6
571	Tumor	0.9
132	Normal	0.9
172	Normal	0.9
358	Normal	0.9
278	Normal	0.9
128	Normal	0.9
314	Normal	0.8
388	Normal	0.8
344	Normal	0.8
426	Normal	0.8
436	Normal	0.8
428	Normal	0.8
258	Normal	0.8
394	Normal	0.8
342	Normal	0.8
138	Normal	0.8
114	Normal	0.8
111	Normal	0.8
452	Normal	0.8
446	Normal	0.8
424	Normal	0.7
162	Normal	0.7
136	Normal	0.7
618	Normal	0.7
332	Normal	0.7
354	Normal	0.7
222	Normal	0.7
423	Tumor	0.7
432	Normal	0.7
186	Normal	0.7
298	Normal	0.7
414	Normal	0.7
636	Normal	0.7
615	Tumor	0.7
232	Normal	0.7
824	Normal	0.7
376	Normal	0.7
148	Normal	0.7
361	Tumor	0.7
818	Normal	0.6
422	Normal	0.6
392	Normal	0.6
564	Normal	0.6
396	Normal	0.6
648	Normal	0.6
568	Normal	0.6
786	Normal	0.6
366	Normal	0.6
196	Normal	0.5
746	Normal	0.5
464	Normal	0.5
912	Normal	0.5
745	Tumor	0.5
642	Normal	0.5
126	Normal	0.5
227	Tumor	0.5
352	Normal	0.5
386	Normal	0.5
146	Normal	0.5
882	Normal	0.5
272	Normal	0.5
218	Normal	0.5
368	Normal	0.5
664	Normal	0.5
723	Tumor	0.5
1045	Tumor	0.5
616	Normal	0.5
365	Tumor	0.5
722	Normal	0.5
312	Normal	0.5
456	Normal	0.5
113	Tumor	0.5
738	Normal	0.4
742	Normal	0.4
914	Normal	0.4
628	Normal	0.4
666	Normal	0.4
862	Normal	0.4
462	Normal	0.4
362	Normal	0.4
214	Normal	0.4
635	Tumor	0.4
393	Tumor	0.4
286	Normal	0.4
1046	Normal	0.4
444	Normal	0.4
468	Normal	0.4
145	Tumor	0.4
353	Tumor	0.4
262	Normal	0.4
672	Normal	0.4
572	Normal	0.4
466	Normal	0.4
662	Normal	0.4
574	Normal	0.4
756	Normal	0.4
866	Normal	0.3
744	Normal	0.3
864	Normal	0.3
448	Normal	0.3
858	Normal	0.3
816	Normal	0.3
356	Normal	0.3
142	Normal	0.3
1032	Normal	0.3
127	Tumor	0.3
228	Normal	0.3
465	Tumor	0.3
124	Normal	0.3
878	Normal	0.3
868	Normal	0.3
434	Normal	0.3
741	Tumor	0.3
1022	Normal	0.3
137	Tumor	0.3
1026	Normal	0.3
482	Normal	0.3
341	Tumor	0.2
728	Normal	0.2
188	Normal	0.2
874	Normal	0.2
1027	Tumor	0.2
714	Normal	0.2
411	Tumor	0.2
884	Normal	0.2
1043	Tumor	0.2
231	Tumor	0.2
698	Normal	0.2
384	Normal	0.2
443	Tumor	0.2
257	Tumor	0.2
713	Tumor	0.2
1042	Normal	0.2
433	Tumor	0.2
284	Normal	0.2
852	Normal	0.2
528	Normal	0.1
1028	Normal	0.1
261	Tumor	0.1
461	Tumor	0.1
451	Tumor	0.1
472	Normal	0.1
268	Normal	0.1
161	Tumor	0.1
558	Normal	0.1
112	Tumor	0.1
416	Normal	0.1
982	Normal	0.1
357	Tumor	0.1
911	Tumor	0.1
328	Normal	0.1
534	Normal	0.1
563	Tumor	0.1
1044	Normal	0.1
135	Tumor	0.1
778	Normal	0.1
867	Tumor	0.1
1016	Normal	0.1
686	Normal	0.0
224	Normal	0.0
716	Normal	0.0
195	Tumor	0.0
721	Tumor	0.0
171	Tumor	0.0
217	Tumor	0.0
125	Tumor	0.0
421	Tumor	0.0
427	Tumor	0.0
515	Tumor	0.0
567	Tumor	0.0
526	Normal	0.0
617	Tumor	0.0
785	Tumor	0.0
863	Tumor	0.0
387	Tumor	0.0
187	Tumor	0.0
192	Normal	0.0
271	Tumor	0.0
327	Tumor	0.0
267	Tumor	0.0
755	Tumor	0.0
557	Tumor	0.0
221	Tumor	0.0
1025	Tumor	-0.1
191	Tumor	-0.1
1014	Normal	-0.1
873	Tumor	-0.1
823	Tumor	-0.1
984	Normal	-0.1
313	Tumor	-0.1
641	Tumor	-0.1
364	Normal	-0.1
141	Tumor	-0.1
514	Normal	-0.1
481	Tumor	-0.1
425	Tumor	-0.1
922	Normal	-0.1
383	Tumor	-0.1
297	Tumor	-0.1
412	Normal	-0.1
431	Tumor	-0.1
978	Normal	-0.1
513	Tumor	-0.1
212	Normal	-0.1
488	Normal	-0.1
924	Normal	-0.1
223	Tumor	-0.1
696	Normal	-0.1
777	Tumor	-0.1
573	Tumor	-0.1
964	Normal	-0.2
474	Normal	-0.2
213	Tumor	-0.2
976	Normal	-0.2
413	Tumor	-0.2
727	Tumor	-0.2
695	Tumor	-0.2
851	Tumor	-0.2
815	Tumor	-0.2
1041	Tumor	-0.2
813	Tumor	-0.2
391	Tumor	-0.2
351	Tumor	-0.2
814	Normal	-0.2
938	Normal	-0.2
981	Tumor	-0.2
926	Normal	-0.2
185	Tumor	-0.2
743	Tumor	-0.2
883	Tumor	-0.2
435	Tumor	-0.2
968	Normal	-0.2
918	Normal	-0.2
954	Normal	-0.2
147	Tumor	-0.2
925	Tumor	-0.2
944	Normal	-0.2
494	Normal	-0.3
445	Tumor	-0.3
518	Normal	-0.3
956	Normal	-0.3
663	Tumor	-0.3
467	Tumor	-0.3
955	Tumor	-0.3
363	Tumor	-0.3
857	Tumor	-0.3
952	Normal	-0.3
647	Tumor	-0.3
915	Tumor	-0.3
517	Tumor	-0.3
913	Tumor	-0.3
923	Tumor	-0.3
455	Tumor	-0.3
487	Tumor	-0.3
367	Tumor	-0.4
1031	Tumor	-0.4
484	Normal	-0.4
916	Normal	-0.4
665	Tumor	-0.4
966	Normal	-0.4
123	Tumor	-0.4
737	Tumor	-0.4
463	Tumor	-0.4
385	Tumor	-0.4
277	Tumor	-0.4
546	Normal	-0.4
881	Tumor	-0.4
343	Tumor	-0.4
1021	Tumor	-0.4
671	Tumor	-0.5
375	Tumor	-0.5
478	Normal	-0.5
331	Tumor	-0.5
967	Tumor	-0.5
447	Tumor	-0.5
921	Tumor	-0.5
395	Tumor	-0.5
538	Normal	-0.5
953	Tumor	-0.5
958	Normal	-0.5
516	Normal	-0.5
491	Tumor	-0.5
861	Tumor	-0.5
311	Tumor	-0.5
877	Tumor	-0.5
415	Tumor	-0.6
498	Normal	-0.6
715	Tumor	-0.6
1013	Tumor	-0.6
524	Normal	-0.6
1015	Tumor	-0.6
685	Tumor	-0.7
285	Tumor	-0.7
554	Normal	-0.7
483	Tumor	-0.7
661	Tumor	-0.7
527	Tumor	-0.8
697	Tumor	-0.8
477	Tumor	-0.8
724	Normal	-0.8
817	Tumor	-0.8
983	Tumor	-0.8
525	Tumor	-0.8
917	Tumor	-0.8
865	Tumor	-0.8
975	Tumor	-0.8
536	Normal	-0.9
492	Normal	-0.9
937	Tumor	-0.9
537	Tumor	-0.9
977	Tumor	-0.9
523	Tumor	-1.0
553	Tumor	-1.0
951	Tumor	-1.0
943	Tumor	-1.0
283	Tumor	-1.1
355	Tumor	-1.1
493	Tumor	-1.1
131	Tumor	-1.2
497	Tumor	-1.2
957	Tumor	-1.2
471	Tumor	-1.2
211	Tumor	-1.2
963	Tumor	-1.3
533	Tumor	-1.3
535	Tumor	-1.3
473	Tumor	-1.3
545	Tumor	-1.6
965	Tumor	-1.7
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA070412
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma
Adenocarcinoma, NOS Cholangiocarcinoma