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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:212.7 nTPM
FANTOM5:122.6 Scaled Tags Per Million
Pig:3.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041394Antibody CAB016209
Glial cells Not detectedMedium
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 212.7
Samples: 246

Max nTPM: 595.8
Min nTPM: 96.5
Std nTPM: 66.9
Median nTPM: 202.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 595.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 515.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 498.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 493.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 489.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 404.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 390.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 363.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 347.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 345.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 328.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 321.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 312.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 311.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 310.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 309.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 307.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 306.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 303.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 301.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 297.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 293.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 292.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 291.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 284.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 283.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 280.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 280.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 278.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 277.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 276.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 276.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 274.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 273.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 271.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 265.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 265.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 263.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 262.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 258.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 254.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 253.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 252.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 251.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 249.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 249.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 247.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 241.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 240.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 240.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 239.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 238.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 237.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 236.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 236.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 235.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 233.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 233.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 233.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 232.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 231.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 230.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 228.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 228.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 228.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 228.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 228.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 227.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 226.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 225.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 225.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 224.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 224.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 224.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 224.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 223.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 223.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 222.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 222.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 222.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 222.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 221.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 221.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 220.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 220.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 220.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 219.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 218.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 217.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 217.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 216.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 215.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 215.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 214.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 214.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 213.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 213.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 212.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 212.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 212.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 211.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 210.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 210.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 210.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 210.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 210.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 210.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 209.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 209.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 209.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 209.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 208.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 207.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 206.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 206.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 205.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 204.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 204.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 203.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 202.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 202.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 202.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 202.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 201.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 200.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 200.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 199.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 198.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 198.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 197.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 195.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 195.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 195.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 194.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 194.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 194.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 194.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 194.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 193.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 192.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 192.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 192.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 191.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 191.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 190.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 190.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 190.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 189.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 188.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 188.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 187.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 186.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 186.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 185.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 185.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 184.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 184.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 183.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 182.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 181.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 180.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 180.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 180.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 179.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 179.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 178.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 177.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 176.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 175.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 175.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 175.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 175.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 174.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 174.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 174.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 173.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 172.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 172.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 172.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 171.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 171.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 171.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 171.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 171.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 170.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 169.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 169.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 167.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 167.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 167.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 166.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 164.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 163.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 163.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 163.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 163.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 162.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 162.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 160.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 160.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 160.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 159.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 159.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 158.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 158.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 158.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 158.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 157.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 157.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 157.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 156.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 156.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 156.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 155.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 155.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 152.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 152.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 151.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 151.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 150.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 149.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 148.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 148.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 147.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 147.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 145.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 145.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 145.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 144.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 140.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 138.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 136.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 136.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 136.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 134.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 131.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 129.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 126.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 124.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 124.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 105.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 96.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

122.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 122.6
FF:10164-103B2 76 years, female 122.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.1
Pig sample Sample description nTPM
Caudate
nTPM: 3.1
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.9
Sample A Female 2.9
Sample B Female 3.3
Sample C Male 3.0
Sample D Male 3.1

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