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MICAL3
HPA
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  • SUMMARY

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  • MICAL3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MICAL3
Synonyms KIAA0819
Gene descriptioni

Full gene name according to HGNC.

Microtubule associated monooxygenase, calponin and LIM domain containing 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q11.21
Chromosome location (bp) 17787649 - 18024561
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000243156 (version 109)
Entrez gene 57553
HGNC HGNC:24694
UniProt Q7RTP6 (UniProt - Evidence at protein level)
neXtProt NX_Q7RTP6
GeneCards MICAL3
Antibodypedia MICAL3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Monooxygenase that promotes depolymerization of F-actin by mediating oxidation of specific methionine residues on actin to form methionine-sulfoxide, resulting in actin filament disassembly and preventing repolymerization. In the absence of actin, it also functions as a NADPH oxidase producing H(2)O(2). Seems to act as Rab effector protein and plays a role in vesicle trafficking. Involved in exocytic vesicles tethering and fusion: the monooxygenase activity is required for this process and implicates RAB8A associated with exocytotic vesicles. Required for cytokinesis. Contributes to stabilization and/or maturation of the intercellular bridge independently of its monooxygenase activity. Promotes recruitment of Rab8 and ERC1 to the intercellular bridge, and together these proteins are proposed to function in timely abscission.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Actin-binding, Monooxygenase, Oxidoreductase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, Exocytosis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

FAD, Flavoprotein, Metal-binding, NADP, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables actin binding activity. Involved in actin filament depolymerization. Located in several cellular components, including Flemming body; intercellular bridge; and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MICAL3-202
ENSP00000372574
ENST00000383094
Q7RTP6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003779 [actin binding]
GO:0004497 [monooxygenase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0006887 [exocytosis]
GO:0007010 [cytoskeleton organization]
GO:0007049 [cell cycle]
GO:0016491 [oxidoreductase activity]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0030042 [actin filament depolymerization]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0042995 [cell projection]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0051179 [localization]
GO:0051301 [cell division]
GO:0060090 [molecular adaptor activity]
GO:0071949 [FAD binding]
GO:0090543 [Flemming body]
Show all
948 aa
106.8 kDa
No 0
MICAL3-203
ENSP00000383406
ENST00000400561
Q7RTP6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0003779 [actin binding]
GO:0004497 [monooxygenase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0006887 [exocytosis]
GO:0007010 [cytoskeleton organization]
GO:0007049 [cell cycle]
GO:0016491 [oxidoreductase activity]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0030042 [actin filament depolymerization]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0042995 [cell projection]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0051179 [localization]
GO:0051301 [cell division]
GO:0060090 [molecular adaptor activity]
GO:0071949 [FAD binding]
GO:0090543 [Flemming body]
Show all
966 aa
109 kDa
No 0
MICAL3-204
ENSP00000391827
ENST00000414725
Q7RTP6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003779 [actin binding]
GO:0004497 [monooxygenase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0006887 [exocytosis]
GO:0007010 [cytoskeleton organization]
GO:0007049 [cell cycle]
GO:0016491 [oxidoreductase activity]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0030042 [actin filament depolymerization]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0042995 [cell projection]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0051179 [localization]
GO:0051301 [cell division]
GO:0060090 [molecular adaptor activity]
GO:0071949 [FAD binding]
GO:0090543 [Flemming body]
Show all
976 aa
109.9 kDa
No 0
MICAL3-205
ENSP00000406193
ENST00000424046
C9J922
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0004497 [monooxygenase activity]
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0071949 [FAD binding]
Show all
125 aa
14.3 kDa
No 0
MICAL3-206
ENSP00000416015
ENST00000441493
Q7RTP6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0003779 [actin binding]
GO:0004497 [monooxygenase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0006887 [exocytosis]
GO:0007010 [cytoskeleton organization]
GO:0007049 [cell cycle]
GO:0016491 [oxidoreductase activity]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0030042 [actin filament depolymerization]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0042995 [cell projection]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0051179 [localization]
GO:0051301 [cell division]
GO:0060090 [molecular adaptor activity]
GO:0071949 [FAD binding]
GO:0090543 [Flemming body]
Show all
2002 aa
224.3 kDa
No 0
MICAL3-207
ENSP00000462531
ENST00000461307
J3KSK6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Show all
GO:0005515 [protein binding]
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
Show all
496 aa
55.3 kDa
No 1
MICAL3-212
ENSP00000464007
ENST00000498573
J3QR21
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
Show all
198 aa
21.7 kDa
No 0
MICAL3-213
ENSP00000463882
ENST00000577821
J3QQT0
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
Show all
269 aa
31 kDa
No 0
MICAL3-215
ENSP00000463453
ENST00000578984
J3QLA3
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
Show all
190 aa
20.9 kDa
No 0
MICAL3-216
ENSP00000462107
ENST00000579997
J3KRP8
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
Show all
173 aa
19.8 kDa
No 0
MICAL3-218
ENSP00000462905
ENST00000584751
J3KTB6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006887 [exocytosis]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0031267 [small GTPase binding]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
Show all
139 aa
15.5 kDa
No 0
MICAL3-219
ENSP00000462033
ENST00000585038
Q7RTP6
[Direct mapping] [F-actin]-monooxygenase MICAL3
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0003779 [actin binding]
GO:0004497 [monooxygenase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005938 [cell cortex]
GO:0006887 [exocytosis]
GO:0007010 [cytoskeleton organization]
GO:0007049 [cell cycle]
GO:0016491 [oxidoreductase activity]
GO:0016709 [oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen]
GO:0030042 [actin filament depolymerization]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0042995 [cell projection]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0051179 [localization]
GO:0051301 [cell division]
GO:0060090 [molecular adaptor activity]
GO:0071949 [FAD binding]
GO:0090543 [Flemming body]
Show all
1073 aa
121.2 kDa
No 2

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