PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1020.3 nTPM
FANTOM5:502.0 Scaled Tags Per Million
Pig:118.6 nTPM
Mouse:381.4 nTPM
Allen mouse:13.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1020.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 767.9
2188 Female, age 91, both hemispheres 951.6
2301 Female, age 85, both hemispheres 888.6
2090 Male, age 80, both hemispheres 808.9
1984 Male, age 76, both hemispheres 422.4
Area postrema
nTPM: 616.5
2306 Male, age 80, both hemispheres 900.6
2799 Male, age 61, both hemispheres 518.8
2054 Male, age 76, both hemispheres 430.3
Dorsal cochlear nucleus
nTPM: 667.1
2378 Male, age 80, both hemispheres 779.2
2187 Female, age 91, both hemispheres 748.3
2802 Male, age 74, right hemisphere 683.6
2370 Male, age 61, both hemispheres 589.3
2058 Male, age 76, both hemispheres 535.0
Dorsal medullary reticular nucleus
nTPM: 697.4
2373 Male, age 61, both hemispheres 754.9
2040 Female, age 85, both hemispheres 749.3
2088 Male, age 76, both hemispheres 588.0
Dorsal motor vagal complex
nTPM: 531.3
2185 Male, age 76, both hemispheres 718.0
2797 Male, age 61, both hemispheres 599.3
2000 Male, age 74, unknown 571.6
2643 Male, age 74, both hemispheres 530.7
2133 Female, age 91, both hemispheres 508.9
2807 Female, age 85, both hemispheres 489.9
2813 Female, age 72, unknown 448.2
2844 Male, age 55, unknown 384.1
Dorsal tegmental nucleus
nTPM: 549.9
2083 Male, age 80, both hemispheres 780.8
2326 Male, age 74, both hemispheres 612.6
1936 Male, age 76, left hemisphere 413.0
2358 Male, age 61, both hemispheres 393.4
Dorsolateral tegmental area
nTPM: 614.6
2751 Female, age 85, both hemispheres 899.7
2654 Male, age 80, both hemispheres 768.4
2337 Male, age 61, both hemispheres 676.6
2360 Male, age 74, both hemispheres 429.3
2141 Male, age 76, both hemispheres 298.8
Gigantocellular reticular nuclei, medullary
nTPM: 740.7
2314 Male, age 61, both hemispheres 999.4
2387 Female, age 91, both hemispheres 921.3
1876 Female, age 85, both hemispheres 854.0
2022 Male, age 76, right hemisphere 646.8
2310 Male, age 80, both hemispheres 642.1
2462 Male, age 74, both hemispheres 380.8
Gigantocellular reticular nuclei, pars
nTPM: 596.3
2336 Male, age 61, both hemispheres 695.5
2706 Male, age 80, both hemispheres 631.8
2330 Male, age 80, both hemispheres 612.9
2084 Female, age 85, both hemispheres 545.6
2168 Male, age 76, both hemispheres 495.9
Inferior olive
nTPM: 799.7
2178 Male, age 61, both hemispheres 939.2
2628 Female, age 91, both hemispheres 835.7
2563 Male, age 74, both hemispheres 757.3
2379 Male, age 80, both hemispheres 738.4
2085 Female, age 85, both hemispheres 728.0
Kolliker-Fuse nucleus
nTPM: 733.9
2793 Female, age 91, left hemisphere 1158.2
2163 Male, age 80, both hemispheres 612.5
2315 Male, age 76, right hemisphere 430.9
Lateral lemniscal nuclei
nTPM: 688.4
2320 Female, age 91, left hemisphere 901.9
2036 Male, age 80, both hemispheres 732.0
2746 Female, age 85, left hemisphere 663.3
2169 Male, age 76, both hemispheres 620.0
2453 Male, age 74, right hemisphere 524.8
Lateral medullary reticular nucleus
nTPM: 847.5
2852 Male, age 80, both hemispheres 1062.0
2374 Male, age 61, both hemispheres 955.1
2305 Male, age 74, both hemispheres 895.2
2190 Female, age 85, both hemispheres 760.9
2044 Male, age 76, both hemispheres 743.0
2804 Female, age 91, both hemispheres 668.9
Lateral parabrachial nucleus
nTPM: 856.8
2792 Male, age 76, both hemispheres 1397.9
2013 Male, age 80, both hemispheres 847.4
2790 Male, age 61, both hemispheres 657.7
2139 Female, age 85, right hemisphere 524.1
Lateral vestibular nucleus
nTPM: 644.2
2311 Male, age 80, both hemispheres 740.5
2184 Male, age 76, both hemispheres 547.9
Locus coeruleus
nTPM: 331.7
2720 Male, age 74, both hemispheres 440.4
2162 Male, age 80, both hemispheres 432.1
2317 Female, age 72, unknown 341.5
2123 Female, age 91, both hemispheres 311.9
2788 Male, age 74, unknown 308.4
2014 Male, age 55, unknown 277.0
1980 Male, age 76, both hemispheres 210.7
Medial olivary nucleus
nTPM: 969.2
1943 Male, age 61, both hemispheres 1304.7
1962 Male, age 76, both hemispheres 960.2
2851 Male, age 80, both hemispheres 849.5
2138 Female, age 91, both hemispheres 762.4
Medial parabrachial nucleus
nTPM: 717.4
2170 Female, age 91, both hemispheres 865.7
2463 Female, age 85, right hemisphere 799.1
2854 Male, age 80, both hemispheres 749.4
2156 Male, age 61, both hemispheres 603.9
2786 Male, age 76, both hemispheres 568.9
Medial periolivary nuclei
nTPM: 640.0
2081 Male, age 80, both hemispheres 752.0
2458 Female, age 91, both hemispheres 729.7
2791 Male, age 74, right hemisphere 705.5
2063 Male, age 76, both hemispheres 619.6
2171 Female, age 85, both hemispheres 393.2
Medial vestibular nucleus
nTPM: 650.9
2803 Female, age 91, both hemispheres 874.0
2801 Male, age 74, both hemispheres 864.9
2093 Male, age 80, both hemispheres 697.4
2624 Male, age 61, both hemispheres 693.1
2743 Female, age 85, both hemispheres 471.0
2134 Male, age 76, both hemispheres 305.2
Motor facial nucleus
nTPM: 681.4
2697 Female, age 85, both hemispheres 873.9
2126 Male, age 61, both hemispheres 774.9
2365 Male, age 74, right hemisphere 761.7
2795 Female, age 91, both hemispheres 606.7
2327 Male, age 80, both hemispheres 561.9
2062 Male, age 76, both hemispheres 509.6
Motor hypoglossal nucleus
nTPM: 614.1
2182 Male, age 80, both hemispheres 840.7
2132 Female, age 85, both hemispheres 770.8
2125 Female, age 91, both hemispheres 762.6
2461 Male, age 61, both hemispheres 448.8
2277 Male, age 76, both hemispheres 247.6
Motor trigeminal nucleus
nTPM: 619.7
2560 Male, age 74, both hemispheres 729.6
2321 Female, age 91, both hemispheres 676.3
2079 Male, age 80, both hemispheres 593.2
2309 Male, age 76, both hemispheres 564.1
2335 Male, age 61, both hemispheres 535.4
Nuclei of the trapezoid body
nTPM: 571.0
2166 Male, age 80, both hemispheres 725.5
2368 Female, age 91, both hemispheres 659.4
2159 Male, age 61, both hemispheres 571.8
1983 Male, age 76, both hemispheres 561.6
2735 Female, age 85, both hemispheres 336.8
Nucleus ambiguus
nTPM: 756.7
2071 Male, age 76, both hemispheres 949.9
2096 Female, age 85, both hemispheres 563.5
Nucleus cuneatus
nTPM: 756.8
2380 Male, age 80, both hemispheres 1031.6
2381 Male, age 80, both hemispheres 934.9
2808 Female, age 85, both hemispheres 917.7
2376 Male, age 61, both hemispheres 828.8
2564 Male, age 74, both hemispheres 697.3
2100 Male, age 76, both hemispheres 685.6
2805 Female, age 91, both hemispheres 582.2
2562 Male, age 61, both hemispheres 570.1
2131 Male, age 76, both hemispheres 563.3
Nucleus gracilis
nTPM: 927.1
2382 Male, age 80, both hemispheres 1265.5
2299 Female, age 85, both hemispheres 758.4
2627 Male, age 74, both hemispheres 757.3
Nucleus raphe magnus
nTPM: 572.5
2459 Female, age 91, both hemispheres 772.7
2051 Male, age 76, both hemispheres 758.8
2328 Male, age 80, both hemispheres 704.2
2455 Male, age 74, both hemispheres 542.0
2160 Male, age 61, both hemispheres 352.1
2172 Female, age 85, both hemispheres 304.9
Nucleus raphe obscurus
nTPM: 1020.3
2845 Female, age 85, midline 1182.1
2800 Male, age 61, midline 969.4
2142 Male, age 76, midline 909.4
Nucleus raphe pallidus
nTPM: 892.6
1924 Male, age 61, midline 995.7
2145 Male, age 76, midline 958.1
2183 Male, age 80, midline 723.8
Nucleus tractus solitarii
nTPM: 313.7
2307 Male, age 80, both hemispheres 355.9
2656 Male, age 76, both hemispheres 347.3
2191 Female, age 85, both hemispheres 298.5
2144 Female, age 91, right hemisphere 253.2
Paramedian reticular nucleus
nTPM: 631.5
2057 Male, age 80, both hemispheres 676.4
2050 Female, age 85, both hemispheres 667.8
2052 Male, age 76, both hemispheres 666.5
2313 Male, age 61, both hemispheres 515.5
Parvicellular reticular nuclei
nTPM: 615.7
2119 Male, age 80, both hemispheres 682.6
2095 Male, age 76, both hemispheres 663.6
2558 Male, age 74, both hemispheres 500.9
Parvicellular reticular nuclei, medullary
nTPM: 588.5
2189 Female, age 91, both hemispheres 647.3
2181 Male, age 80, left hemisphere 563.7
2091 Female, age 85, both hemispheres 554.4
Pedunculopontine tegmental nucleus
nTPM: 570.1
2334 Male, age 80, both hemispheres 630.7
2338 Male, age 61, both hemispheres 587.7
1921 Female, age 85, both hemispheres 492.1
Peritrigeminal nucleus
nTPM: 720.2
2067 Female, age 85, both hemispheres 746.5
2179 Male, age 61, both hemispheres 710.4
2136 Male, age 76, both hemispheres 703.6
Pontine nuclei
nTPM: 736.8
2454 Male, age 74, left hemisphere 1055.8
2319 Female, age 91, both hemispheres 970.6
2109 Female, age 72, unknown 805.6
1863 Male, age 55, unknown 731.5
1968 Male, age 76, left hemisphere 672.0
2115 Male, age 80, left hemisphere 671.6
2787 Female, age 85, both hemispheres 524.1
2727 Male, age 61, right hemisphere 462.9
Pontine raphe nucleus
nTPM: 465.2
2122 Female, age 85, midline 493.9
2853 Male, age 76, midline 436.6
Posteroventral cochlear nucleus
nTPM: 818.9
2135 Female, age 91, both hemispheres 1075.1
2341 Male, age 80, both hemispheres 1038.8
2371 Male, age 61, both hemispheres 759.5
2070 Male, age 76, both hemispheres 730.1
2752 Female, age 85, both hemispheres 490.7
Prepositus hypoglossal nucleus
nTPM: 632.3
2855 Female, age 85, right hemisphere 822.9
2086 Male, age 80, both hemispheres 441.8
Principal sensory trigeminal nucleus
nTPM: 598.8
2367 Female, age 91, left hemisphere 964.5
2008 Male, age 80, left hemisphere 513.7
2324 Male, age 76, both hemispheres 479.7
2158 Male, age 61, both hemispheres 437.5
Reticular pontine nucleus, caudal
nTPM: 758.5
2559 Male, age 74, both hemispheres 865.2
2457 Female, age 91, both hemispheres 853.2
2092 Male, age 76, both hemispheres 769.0
2332 Male, age 80, right hemisphere 546.8
Reticular pontine nucleus, oral
nTPM: 821.5
2366 Female, age 91, both hemispheres 1071.3
2361 Male, age 74, both hemispheres 892.8
1939 Male, age 80, both hemispheres 774.9
2012 Female, age 85, both hemispheres 705.0
2167 Male, age 76, both hemispheres 663.2
Reticulotegmental nucleus
nTPM: 568.3
2322 Female, age 91, both hemispheres 680.7
2333 Male, age 80, both hemispheres 641.5
2452 Male, age 74, both hemispheres 609.4
2325 Male, age 76, both hemispheres 341.5
Spinal trigeminal nucleus, caudal
nTPM: 734.9
2312 Male, age 61, both hemispheres 904.8
2308 Male, age 80, both hemispheres 786.6
2447 Male, age 76, both hemispheres 687.9
2390 Female, age 91, both hemispheres 669.3
2642 Male, age 74, both hemispheres 625.7
Spinal trigeminal nucleus, interpolar
nTPM: 593.4
2389 Female, age 91, both hemispheres 697.4
2033 Male, age 80, both hemispheres 671.2
2386 Female, age 85, both hemispheres 662.2
2066 Male, age 76, right hemisphere 474.0
2625 Male, age 61, both hemispheres 462.1
Spinal trigeminal nucleus, oral
nTPM: 554.7
2164 Male, age 80, both hemispheres 649.1
1978 Male, age 76, both hemispheres 572.8
2737 Female, age 85, both hemispheres 442.3
Spinal vestibular nucleus
nTPM: 727.0
2748 Male, age 76, both hemispheres 850.4
2806 Female, age 85, both hemispheres 821.8
2384 Male, age 74, both hemispheres 776.2
2186 Female, age 91, both hemispheres 740.8
2780 Male, age 80, both hemispheres 642.0
2796 Male, age 61, both hemispheres 531.1
Subcoeruleus area
nTPM: 634.5
2369 Female, age 85, left hemisphere 1070.9
1958 Male, age 80, both hemispheres 608.1
2089 Male, age 76, left hemisphere 566.6
2451 Male, age 74, both hemispheres 476.1
2323 Female, age 91, left hemisphere 450.6
Superior olive
nTPM: 762.5
2020 Male, age 76, both hemispheres 985.4
2364 Male, age 74, right hemisphere 755.6
2329 Male, age 80, right hemisphere 751.0
2561 Female, age 91, both hemispheres 688.9
1875 Female, age 85, both hemispheres 631.5
Superior vestibular nucleus
nTPM: 561.1
2015 Male, age 80, both hemispheres 683.2
2383 Male, age 74, both hemispheres 509.8
2061 Male, age 76, both hemispheres 490.4
Ventral medullary reticular nucleus
nTPM: 845.9
2372 Male, age 61, both hemispheres 936.5
2060 Male, age 76, both hemispheres 755.4
Ventral periolivary nuclei
nTPM: 659.6
2023 Male, age 76, both hemispheres 1106.0
2165 Male, age 80, both hemispheres 585.3
2794 Female, age 91, left hemisphere 506.4
2130 Female, age 85, both hemispheres 440.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 724.7
2118 Male, age 80, both hemispheres 865.1
2180 Male, age 61, both hemispheres 828.7
1986 Male, age 76, both hemispheres 668.7
2302 Female, age 91, both hemispheres 643.0
2741 Female, age 85, both hemispheres 618.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 730.7
2456 Female, age 91, both hemispheres 817.7
1959 Male, age 76, both hemispheres 779.1
2359 Male, age 61, both hemispheres 771.3
2840 Female, age 85, both hemispheres 743.4
2161 Male, age 80, both hemispheres 684.0
2449 Male, age 74, both hemispheres 589.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 502.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 394.7
FF:10165-103B3 76 years, female 457.6
FF:10182-103D2 60 years, female 331.9
Medulla oblongata
Scaled Tags Per Million: 361.2
FF:10038-101F2 18-64 years, mixed 499.9
FF:10155-103A2 76 years, female 303.6
FF:10174-103C3 60 years, female 280.1
Pons
Scaled Tags Per Million: 502.0
FF:10033-101E6 18-54 years, mixed 502.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 118.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 118.6
Samples: 4

Max nTPM: 136.9
Min nTPM: 90.6
Sample A Female 121.5
Sample B Female 90.6
Sample C Male 125.3
Sample D Male 136.9
Pons
nTPM: 88.6
Samples: 4

Max nTPM: 126.7
Min nTPM: 60.0
Sample A Female 79.4
Sample B Female 60.0
Sample C Male 88.3
Sample D Male 126.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 381.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 381.4
Samples: 4

Max nTPM: 425.8
Min nTPM: 316.0
Sample A Male 370.0
Sample B Male 316.0
Sample C Female 425.8
Sample D Female 413.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.4
45668 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 13.4
67936386 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 6.8
Pons
Expression energy: 12.7
45668 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 12.7
67936386 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 7.2

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