HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:98.7 nTPM
HPA Brain:130.5 nTPM
GTEx:98.7 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:49.3 nTPM
Mouse:90.2 nTPM
Allen mouse:21.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055135
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 130.5
Sample id Sample description nTPM
Hippocampus
nTPM: 106.5
2148 Female, age 91, left hemisphere 141.5
2621 Female, age 67, right hemisphere 123.9
1898 Male, age 80, left hemisphere 119.8
1855 Male, age 76, left hemisphere 95.9
1911 Female, age 85, right hemisphere 88.1
2529 Female, age 94, left hemisphere 69.9
Dentate gyrus
nTPM: 111.3
1927 Female, age 91, both hemispheres 159.5
2531 Female, age 67, both hemispheres 143.0
2528 Male, age 74, both hemispheres 112.3
2010 Male, age 76, both hemispheres 94.5
2246 Female, age 85, both hemispheres 84.5
2530 Female, age 94, left hemisphere 74.3
Entorhinal gyrus
nTPM: 87.4
2613 Female, age 94, left hemisphere 118.0
2686 Male, age 75, right hemisphere 103.7
2764 Male, age 80, right hemisphere 91.5
1787 Male, age 76, left hemisphere 72.3
1938 Female, age 85, left hemisphere 72.1
2117 Female, age 91, right hemisphere 66.4
Hippocampus, CA1
nTPM: 126.8
2749 Male, age 80, left hemisphere 189.5
2045 Male, age 76, both hemispheres 119.0
1873 Female, age 85, both hemispheres 115.6
2082 Female, age 91, right hemisphere 111.0
2527 Male, age 74, both hemispheres 98.9
Hippocampus, CA2
nTPM: 93.1
1892 Male, age 76, both hemispheres 117.0
1963 Male, age 80, left hemisphere 115.1
2113 Female, age 91, right hemisphere 94.2
2249 Male, age 74, both hemispheres 88.0
2437 Female, age 94, left hemisphere 80.0
1940 Female, age 85, left hemisphere 64.5
Hippocampus, CA3
nTPM: 130.5
2620 Female, age 94, left hemisphere 168.8
2861 Female, age 67, both hemispheres 164.4
2137 Male, age 80, left hemisphere 159.8
1867 Male, age 76, both hemispheres 114.4
2436 Male, age 74, both hemispheres 95.1
1891 Female, age 85, both hemispheres 80.4
Parahippocampal cortex
nTPM: 80.4
2693 Female, age 94, both hemispheres 101.8
2245 Female, age 91, both hemispheres 98.2
2622 Female, age 67, right hemisphere 93.4
1850 Male, age 80, both hemispheres 82.7
1990 Female, age 91, right hemisphere 77.6
2250 Female, age 67, right hemisphere 74.9
1933 Female, age 85, both hemispheres 74.6
2532 Female, age 72, left hemisphere 69.6
2692 Male, age 74, both hemispheres 66.0
2018 Male, age 76, both hemispheres 65.1
Perirhinal gyrus
nTPM: 92.5
1847 Female, age 91, left hemisphere 108.2
2521 Female, age 94, right hemisphere 103.0
1794 Male, age 80, right hemisphere 93.1
1841 Female, age 85, right hemisphere 86.8
2848 Male, age 76, right hemisphere 71.1
Subiculum
nTPM: 79.2
2729 Female, age 91, right hemisphere 112.3
1901 Male, age 80, both hemispheres 97.0
2619 Male, age 74, both hemispheres 73.5
1977 Female, age 85, both hemispheres 70.7
2042 Male, age 76, both hemispheres 62.5
2438 Female, age 94, left hemisphere 59.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 98.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.7
Samples: 197

Max nTPM: 275.2
Min nTPM: 8.5
Std nTPM: 47.0
Median nTPM: 93.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 275.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 274.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 218.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 208.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 188.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 183.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 182.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 175.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 174.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 173.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 172.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 31.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 49.3
Pig sample Sample description nTPM
Subiculum
nTPM: 36.7
Samples: 4

Max nTPM: 51.2
Min nTPM: 26.8
Sample A Female 51.2
Sample B Female 32.2
Sample C Male 36.7
Sample D Male 26.8
Dorsal hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 44.1
Min nTPM: 29.3
Sample A Female 44.1
Sample B Female 41.8
Sample C Male 32.8
Sample D Male 29.3
Entorhinal cortex
nTPM: 49.3
Samples: 4

Max nTPM: 58.2
Min nTPM: 43.5
Sample A Female 58.2
Sample B Female 43.9
Sample C Male 51.7
Sample D Male 43.5
Ventral hippocampus
nTPM: 42.0
Samples: 4

Max nTPM: 60.7
Min nTPM: 27.2
Sample A Female 50.3
Sample B Female 27.2
Sample C Male 60.7
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 90.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.3
Samples: 4

Max nTPM: 94.2
Min nTPM: 85.0
Sample A Male 88.0
Sample B Male 94.2
Sample C Female 85.0
Sample D Female 93.8
Hippocampal formation
nTPM: 83.9
Samples: 4

Max nTPM: 89.8
Min nTPM: 78.0
Sample A Male 78.0
Sample B Male 83.3
Sample C Female 89.8
Sample D Female 84.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.3
67767446 Antisense, RP_040916_01_H06, Mouse strain C57BL/6J (56 days, male) 25.2
74658160 Antisense, RP_060220_02_C11, Mouse strain C57BL/6J (56 days, male) 17.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org