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EEF1G
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:555.7 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Pig:195.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040688Antibody HPA055316
Glial cells Not detectedNot detected
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

555.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 555.7
Samples: 246

Max nTPM: 1360.6
Min nTPM: 275.8
Std nTPM: 126.1
Median nTPM: 540.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1360.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1100.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 897.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 888.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 874.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 862.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 861.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 858.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 855.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 853.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 816.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 769.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 769.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 757.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 748.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 735.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 732.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 727.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 727.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 726.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 725.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 716.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 716.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 706.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 705.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 698.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 688.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 683.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 683.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 682.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 681.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 680.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 678.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 674.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 673.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 672.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 667.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 663.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 662.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 658.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 657.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 656.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 644.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 644.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 643.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 642.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 638.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 637.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 634.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 629.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 629.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 623.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 623.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 620.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 620.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 619.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 618.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 617.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 615.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 614.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 614.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 612.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 612.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 611.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 611.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 605.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 605.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 604.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 604.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 602.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 601.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 600.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 600.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 597.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 593.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 592.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 591.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 590.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 589.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 587.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 583.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 582.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 580.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 578.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 578.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 578.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 575.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 575.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 573.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 573.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 573.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 571.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 570.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 570.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 569.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 569.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 568.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 568.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 567.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 566.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 565.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 565.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 565.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 564.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 564.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 562.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 560.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 560.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 558.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 557.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 551.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 551.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 550.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 545.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 544.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 544.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 544.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 544.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 543.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 543.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 543.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 542.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 540.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 540.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 539.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 536.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 534.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 533.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 531.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 530.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 528.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 527.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 525.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 525.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 524.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 523.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 522.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 521.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 518.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 517.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 517.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 517.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 514.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 512.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 512.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 511.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 510.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 510.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 510.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 509.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 509.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 509.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 509.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 506.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 501.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 499.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 498.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 498.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 495.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 494.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 491.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 491.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 490.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 489.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 489.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 489.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 488.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 487.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 486.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 486.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 483.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 482.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 481.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 480.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 478.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 477.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 476.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 475.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 474.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 473.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 471.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 467.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 467.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 466.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 464.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 462.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 462.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 461.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 461.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 460.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 460.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 460.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 459.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 459.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 458.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 458.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 457.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 457.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 456.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 454.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 453.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 452.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 448.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 447.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 446.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 444.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 443.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 442.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 441.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 441.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 441.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 439.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 438.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 437.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 436.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 436.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 433.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 431.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 431.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 431.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 430.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 428.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 428.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 422.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 420.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 419.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 414.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 414.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 413.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 412.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 412.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 412.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 408.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 407.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 404.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 404.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 400.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 400.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 399.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 390.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 381.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 376.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 374.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 361.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 339.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 275.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.6
FF:10164-103B2 76 years, female 25.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

195.7
Pig sample Sample description nTPM
Caudate
nTPM: 195.8
Samples: 4

Max nTPM: 214.9
Min nTPM: 166.0
Sample A Female 192.8
Sample B Female 209.3
Sample C Male 214.9
Sample D Male 166.0

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