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ENSG00000263620
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  • ENSG00000263620
BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:245.0 nTPM
FANTOM5:571.4 Scaled Tags Per Million

THALAMUS - Annotated protein expression
Pending normal tissue analysis

THALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

245.0
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 150.7
2032 Female, age 42, unknown 181.8
2497 Male, age 66, unknown 160.4
2396 Male, age 61, right hemisphere 110.0
Centromedial thalamic nucleus
nTPM: 139.9
2401 Male, age 76, right hemisphere 218.8
2279 Female, age 85, left hemisphere 60.9
Habenula
nTPM: 245.0
1957 Male, age 80, both hemispheres 294.8
2203 Male, age 61, left hemisphere 279.6
2276 Male, age 66, unknown 222.3
2252 Male, age 62, unknown 183.2
Lateral geniculate body
nTPM: 191.1
2106 Female, age 67, right hemisphere 300.8
1953 Male, age 62, unknown 235.4
2035 Female, age 72, unknown 231.8
2399 Male, age 61, left hemisphere 196.4
2575 Female, age 94, right hemisphere 177.3
2841 Male, age 80, both hemispheres 143.8
2659 Male, age 66, unknown 122.9
2857 Male, age 74, right hemisphere 120.5
Lateral thalamic nuclei
nTPM: 205.4
1903 Male, age 76, left hemisphere 275.9
2765 Female, age 67, both hemispheres 239.4
2573 Female, age 94, left hemisphere 214.2
2577 Male, age 74, both hemispheres 149.5
2661 Female, age 72, unknown 147.8
Medial dorsal thalamic nucleus
nTPM: 236.9
2572 Female, age 94, right hemisphere 367.8
2026 Male, age 62, unknown 306.1
1971 Male, age 61, right hemisphere 291.5
2498 Male, age 66, unknown 277.8
1859 Male, age 76, both hemispheres 274.1
1810 Male, age 48, unknown 267.2
2283 Male, age 80, right hemisphere 264.7
2492 Male, age 75, right hemisphere 224.0
1930 Female, age 42, unknown 188.4
2039 Female, age 72, unknown 166.2
2660 Female, age 72, unknown 157.3
2576 Male, age 74, both hemispheres 149.9
2402 Female, age 67, both hemispheres 144.1
Medial geniculate body
nTPM: 178.5
1811 Female, age 42, unknown 249.9
2650 Female, age 94, left hemisphere 234.8
2207 Male, age 80, right hemisphere 178.7
2571 Male, age 75, right hemisphere 162.9
2657 Male, age 74, right hemisphere 153.1
2049 Male, age 76, both hemispheres 137.5
2217 Female, age 72, unknown 132.9
Nucleus reuniens
nTPM: 171.7
2212 Female, age 67, left hemisphere 287.4
2205 Male, age 80, left hemisphere 133.4
2210 Female, age 85, left hemisphere 94.4
Nucleus rhomboideus
nTPM: 157.4
2206 Male, age 80, both hemispheres 245.5
2213 Female, age 67, left hemisphere 135.6
2280 Female, age 85, left hemisphere 90.9
Posterior thalamic nucleus
nTPM: 169.8
2266 Male, age 76, right hemisphere 238.8
2649 Female, age 94, both hemispheres 179.9
2495 Female, age 67, right hemisphere 138.0
2655 Male, age 74, right hemisphere 122.3
Pulvinar
nTPM: 204.7
1972 Male, age 62, unknown 290.9
1932 Male, age 80, right hemisphere 249.1
2398 Male, age 61, left hemisphere 230.2
1899 Female, age 42, unknown 215.9
1929 Male, age 48, unknown 215.7
2582 Female, age 72, unknown 206.7
2214 Male, age 76, right hemisphere 194.4
2496 Female, age 67, right hemisphere 187.4
2724 Male, age 74, right hemisphere 132.2
2499 Male, age 66, unknown 124.5
Subthalamic nucleus
nTPM: 161.5
2406 Female, age 72, unknown 245.1
2282 Male, age 61, both hemispheres 203.8
2275 Male, age 66, unknown 183.7
2658 Male, age 74, both hemispheres 176.1
2124 Male, age 62, unknown 134.5
2779 Female, age 42, unknown 126.7
2056 Female, age 72, unknown 118.8
2216 Male, age 48, unknown 103.2
Ventral posterolateral thalamic nucleus
nTPM: 190.0
2197 Male, age 80, both hemispheres 240.1
2740 Male, age 76, right hemisphere 204.2
2570 Male, age 75, right hemisphere 183.9
2578 Male, age 74, both hemispheres 180.3
2397 Male, age 61, right hemisphere 178.9
2581 Female, age 72, unknown 152.7
Ventral posteromedial thalamic nucleus
nTPM: 214.3
2202 Male, age 61, left hemisphere 329.2
2758 Male, age 80, both hemispheres 255.3
2281 Male, age 75, right hemisphere 167.5
2127 Male, age 76, right hemisphere 162.7
2653 Male, age 74, both hemispheres 156.9
Ventral thalamic nuclei
nTPM: 179.5
2285 Male, age 62, unknown 248.4
1912 Female, age 42, unknown 224.8
1845 Male, age 48, unknown 206.3
1860 Male, age 76, both hemispheres 193.9
2580 Male, age 66, unknown 160.6
2291 Female, age 72, unknown 157.0
2858 Female, age 72, unknown 153.8
2204 Male, age 80, both hemispheres 145.7
2652 Male, age 74, left hemisphere 124.9
Zona incerta
nTPM: 155.9
2215 Male, age 66, unknown 216.9
2208 Male, age 80, right hemisphere 181.4
2822 Male, age 74, right hemisphere 165.9
2663 Female, age 72, unknown 116.2
2403 Male, age 62, unknown 99.0

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

571.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 571.4
FF:10154-103A1 76 years, female 571.4

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