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  • SRGAP2
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:96.3 nTPM
Pig:30.5 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.3
Sample id Sample description nTPM
Area postrema
nTPM: 80.5
2306 Male, age 80, both hemispheres 87.5
2054 Male, age 76, both hemispheres 83.8
2799 Male, age 61, both hemispheres 70.2
Dorsal medullary reticular nucleus
nTPM: 77.7
2088 Male, age 76, both hemispheres 86.5
2373 Male, age 61, both hemispheres 78.2
2040 Female, age 85, both hemispheres 68.5
Dorsal motor vagal complex
nTPM: 82.6
2807 Female, age 85, both hemispheres 136.8
2643 Male, age 74, both hemispheres 100.8
2813 Female, age 72, unknown 76.7
2185 Male, age 76, both hemispheres 76.5
2133 Female, age 91, both hemispheres 72.8
2000 Male, age 74, unknown 68.5
2844 Male, age 55, unknown 67.2
2797 Male, age 61, both hemispheres 61.2
Gigantocellular reticular nuclei, medullary
nTPM: 81.7
2310 Male, age 80, both hemispheres 99.0
2462 Male, age 74, both hemispheres 97.8
2387 Female, age 91, both hemispheres 77.7
2022 Male, age 76, right hemisphere 77.5
2314 Male, age 61, both hemispheres 72.0
1876 Female, age 85, both hemispheres 66.0
Gigantocellular reticular nuclei, pars
nTPM: 88.2
2330 Male, age 80, both hemispheres 106.1
2706 Male, age 80, both hemispheres 91.0
2168 Male, age 76, both hemispheres 90.6
2336 Male, age 61, both hemispheres 76.9
2084 Female, age 85, both hemispheres 76.2
Inferior olive
nTPM: 82.4
2563 Male, age 74, both hemispheres 86.9
2379 Male, age 80, both hemispheres 86.4
2628 Female, age 91, both hemispheres 83.8
2178 Male, age 61, both hemispheres 83.0
2085 Female, age 85, both hemispheres 71.8
Lateral medullary reticular nucleus
nTPM: 91.9
2305 Male, age 74, both hemispheres 114.2
2852 Male, age 80, both hemispheres 103.0
2190 Female, age 85, both hemispheres 89.6
2044 Male, age 76, both hemispheres 84.1
2374 Male, age 61, both hemispheres 82.8
2804 Female, age 91, both hemispheres 77.6
Medial olivary nucleus
nTPM: 94.2
1943 Male, age 61, both hemispheres 114.3
2851 Male, age 80, both hemispheres 94.7
1962 Male, age 76, both hemispheres 90.8
2138 Female, age 91, both hemispheres 76.9
Medial vestibular nucleus
nTPM: 78.2
2743 Female, age 85, both hemispheres 88.5
2801 Male, age 74, both hemispheres 86.6
2624 Male, age 61, both hemispheres 81.9
2134 Male, age 76, both hemispheres 79.2
2093 Male, age 80, both hemispheres 69.3
2803 Female, age 91, both hemispheres 63.6
Motor hypoglossal nucleus
nTPM: 85.0
2182 Male, age 80, both hemispheres 110.6
2277 Male, age 76, both hemispheres 91.7
2132 Female, age 85, both hemispheres 85.6
2461 Male, age 61, both hemispheres 69.8
2125 Female, age 91, both hemispheres 67.2
Nucleus ambiguus
nTPM: 95.0
2096 Female, age 85, both hemispheres 103.2
2071 Male, age 76, both hemispheres 86.9
Nucleus cuneatus
nTPM: 83.9
2808 Female, age 85, both hemispheres 96.6
2381 Male, age 80, both hemispheres 93.0
2131 Male, age 76, both hemispheres 87.9
2376 Male, age 61, both hemispheres 86.0
2380 Male, age 80, both hemispheres 84.6
2564 Male, age 74, both hemispheres 82.5
2100 Male, age 76, both hemispheres 80.6
2805 Female, age 91, both hemispheres 79.7
2562 Male, age 61, both hemispheres 64.0
Nucleus gracilis
nTPM: 95.7
2299 Female, age 85, both hemispheres 105.4
2382 Male, age 80, both hemispheres 91.0
2627 Male, age 74, both hemispheres 90.7
Nucleus raphe obscurus
nTPM: 87.4
2142 Male, age 76, midline 101.6
2845 Female, age 85, midline 86.8
2800 Male, age 61, midline 74.0
Nucleus raphe pallidus
nTPM: 96.3
1924 Male, age 61, midline 116.1
2183 Male, age 80, midline 88.8
2145 Male, age 76, midline 84.0
Nucleus tractus solitarii
nTPM: 87.4
2307 Male, age 80, both hemispheres 111.1
2191 Female, age 85, both hemispheres 100.0
2656 Male, age 76, both hemispheres 77.2
2144 Female, age 91, right hemisphere 61.4
Parvicellular reticular nuclei
nTPM: 84.7
2119 Male, age 80, both hemispheres 89.3
2558 Male, age 74, both hemispheres 85.4
2095 Male, age 76, both hemispheres 79.5
Parvicellular reticular nuclei, medullary
nTPM: 79.9
2091 Female, age 85, both hemispheres 85.4
2181 Male, age 80, left hemisphere 80.2
2189 Female, age 91, both hemispheres 74.1
Peritrigeminal nucleus
nTPM: 96.1
2179 Male, age 61, both hemispheres 101.1
2067 Female, age 85, both hemispheres 99.0
2136 Male, age 76, both hemispheres 88.1
Prepositus hypoglossal nucleus
nTPM: 85.1
2086 Male, age 80, both hemispheres 94.4
2855 Female, age 85, right hemisphere 75.9
Spinal trigeminal nucleus, caudal
nTPM: 92.1
2642 Male, age 74, both hemispheres 113.2
2312 Male, age 61, both hemispheres 105.5
2308 Male, age 80, both hemispheres 90.3
2447 Male, age 76, both hemispheres 79.5
2390 Female, age 91, both hemispheres 72.0
Spinal trigeminal nucleus, interpolar
nTPM: 79.3
2066 Male, age 76, right hemisphere 84.6
2389 Female, age 91, both hemispheres 84.5
2033 Male, age 80, both hemispheres 82.0
2386 Female, age 85, both hemispheres 78.6
2625 Male, age 61, both hemispheres 66.7
Spinal vestibular nucleus
nTPM: 79.1
2384 Male, age 74, both hemispheres 86.0
2780 Male, age 80, both hemispheres 84.0
2796 Male, age 61, both hemispheres 82.0
2748 Male, age 76, both hemispheres 76.3
2186 Female, age 91, both hemispheres 73.4
2806 Female, age 85, both hemispheres 72.9
Superior vestibular nucleus
nTPM: 84.4
2061 Male, age 76, both hemispheres 88.3
2383 Male, age 74, both hemispheres 84.5
2015 Male, age 80, both hemispheres 80.3
Ventral medullary reticular nucleus
nTPM: 78.8
2060 Male, age 76, both hemispheres 82.0
2372 Male, age 61, both hemispheres 75.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 93.2
2118 Male, age 80, both hemispheres 114.6
2741 Female, age 85, both hemispheres 92.4
2302 Female, age 91, both hemispheres 88.0
1986 Male, age 76, both hemispheres 86.1
2180 Male, age 61, both hemispheres 84.9

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 30.5
Samples: 4

Max nTPM: 32.1
Min nTPM: 29.3
Sample A Female 29.9
Sample B Female 30.5
Sample C Male 32.1
Sample D Male 29.3

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