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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:271.8 nTPM
FANTOM5:1.3 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

271.8
Sample id Sample description nTPM
Area postrema
nTPM: 259.9
2054 Male, age 76, both hemispheres 325.5
2799 Male, age 61, both hemispheres 234.4
2306 Male, age 80, both hemispheres 219.8
Dorsal medullary reticular nucleus
nTPM: 271.8
2088 Male, age 76, both hemispheres 349.6
2373 Male, age 61, both hemispheres 243.3
2040 Female, age 85, both hemispheres 222.6
Dorsal motor vagal complex
nTPM: 251.4
2185 Male, age 76, both hemispheres 307.2
2807 Female, age 85, both hemispheres 282.1
2844 Male, age 55, unknown 279.1
2000 Male, age 74, unknown 256.1
2643 Male, age 74, both hemispheres 237.9
2797 Male, age 61, both hemispheres 233.6
2133 Female, age 91, both hemispheres 221.2
2813 Female, age 72, unknown 194.2
Gigantocellular reticular nuclei, medullary
nTPM: 235.5
2022 Male, age 76, right hemisphere 285.6
2387 Female, age 91, both hemispheres 271.0
2462 Male, age 74, both hemispheres 233.2
1876 Female, age 85, both hemispheres 214.6
2310 Male, age 80, both hemispheres 214.0
2314 Male, age 61, both hemispheres 194.6
Gigantocellular reticular nuclei, pars
nTPM: 233.8
2168 Male, age 76, both hemispheres 281.0
2084 Female, age 85, both hemispheres 249.4
2330 Male, age 80, both hemispheres 228.7
2706 Male, age 80, both hemispheres 228.1
2336 Male, age 61, both hemispheres 181.8
Inferior olive
nTPM: 222.5
2379 Male, age 80, both hemispheres 277.1
2563 Male, age 74, both hemispheres 234.7
2178 Male, age 61, both hemispheres 203.7
2628 Female, age 91, both hemispheres 199.2
2085 Female, age 85, both hemispheres 197.8
Lateral medullary reticular nucleus
nTPM: 206.3
2852 Male, age 80, both hemispheres 241.5
2804 Female, age 91, both hemispheres 220.4
2190 Female, age 85, both hemispheres 201.4
2044 Male, age 76, both hemispheres 199.4
2305 Male, age 74, both hemispheres 194.6
2374 Male, age 61, both hemispheres 180.6
Medial olivary nucleus
nTPM: 226.7
2138 Female, age 91, both hemispheres 249.6
1962 Male, age 76, both hemispheres 242.6
1943 Male, age 61, both hemispheres 227.9
2851 Male, age 80, both hemispheres 186.7
Medial vestibular nucleus
nTPM: 187.6
2134 Male, age 76, both hemispheres 224.3
2093 Male, age 80, both hemispheres 214.1
2743 Female, age 85, both hemispheres 206.5
2801 Male, age 74, both hemispheres 177.2
2803 Female, age 91, both hemispheres 174.4
2624 Male, age 61, both hemispheres 128.8
Motor hypoglossal nucleus
nTPM: 244.5
2277 Male, age 76, both hemispheres 342.3
2182 Male, age 80, both hemispheres 257.4
2132 Female, age 85, both hemispheres 245.9
2125 Female, age 91, both hemispheres 215.0
2461 Male, age 61, both hemispheres 161.9
Nucleus ambiguus
nTPM: 259.4
2096 Female, age 85, both hemispheres 289.2
2071 Male, age 76, both hemispheres 229.6
Nucleus cuneatus
nTPM: 263.5
2100 Male, age 76, both hemispheres 380.7
2380 Male, age 80, both hemispheres 289.8
2805 Female, age 91, both hemispheres 263.4
2381 Male, age 80, both hemispheres 262.3
2131 Male, age 76, both hemispheres 261.7
2564 Male, age 74, both hemispheres 260.3
2808 Female, age 85, both hemispheres 229.4
2562 Male, age 61, both hemispheres 219.5
2376 Male, age 61, both hemispheres 204.4
Nucleus gracilis
nTPM: 226.1
2299 Female, age 85, both hemispheres 252.9
2382 Male, age 80, both hemispheres 237.6
2627 Male, age 74, both hemispheres 187.8
Nucleus raphe obscurus
nTPM: 226.4
2142 Male, age 76, midline 293.0
2800 Male, age 61, midline 200.4
2845 Female, age 85, midline 185.8
Nucleus raphe pallidus
nTPM: 256.0
2145 Male, age 76, midline 303.9
1924 Male, age 61, midline 250.3
2183 Male, age 80, midline 213.7
Nucleus tractus solitarii
nTPM: 247.4
2656 Male, age 76, both hemispheres 289.6
2307 Male, age 80, both hemispheres 278.0
2191 Female, age 85, both hemispheres 237.7
2144 Female, age 91, right hemisphere 184.5
Parvicellular reticular nuclei
nTPM: 253.0
2558 Male, age 74, both hemispheres 268.3
2119 Male, age 80, both hemispheres 256.6
2095 Male, age 76, both hemispheres 234.2
Parvicellular reticular nuclei, medullary
nTPM: 219.2
2091 Female, age 85, both hemispheres 250.0
2181 Male, age 80, left hemisphere 217.5
2189 Female, age 91, both hemispheres 190.1
Peritrigeminal nucleus
nTPM: 220.7
2136 Male, age 76, both hemispheres 224.7
2179 Male, age 61, both hemispheres 220.4
2067 Female, age 85, both hemispheres 217.1
Prepositus hypoglossal nucleus
nTPM: 198.6
2086 Male, age 80, both hemispheres 233.6
2855 Female, age 85, right hemisphere 163.6
Spinal trigeminal nucleus, caudal
nTPM: 210.9
2447 Male, age 76, both hemispheres 242.1
2642 Male, age 74, both hemispheres 221.9
2308 Male, age 80, both hemispheres 210.1
2312 Male, age 61, both hemispheres 195.3
2390 Female, age 91, both hemispheres 185.2
Spinal trigeminal nucleus, interpolar
nTPM: 236.5
2386 Female, age 85, both hemispheres 319.3
2389 Female, age 91, both hemispheres 239.5
2033 Male, age 80, both hemispheres 235.1
2066 Male, age 76, right hemisphere 225.0
2625 Male, age 61, both hemispheres 163.4
Spinal vestibular nucleus
nTPM: 214.6
2384 Male, age 74, both hemispheres 265.0
2780 Male, age 80, both hemispheres 249.3
2748 Male, age 76, both hemispheres 232.5
2186 Female, age 91, both hemispheres 203.2
2806 Female, age 85, both hemispheres 181.5
2796 Male, age 61, both hemispheres 155.8
Superior vestibular nucleus
nTPM: 243.1
2061 Male, age 76, both hemispheres 275.1
2015 Male, age 80, both hemispheres 246.0
2383 Male, age 74, both hemispheres 208.3
Ventral medullary reticular nucleus
nTPM: 250.0
2060 Male, age 76, both hemispheres 279.0
2372 Male, age 61, both hemispheres 220.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 211.2
2118 Male, age 80, both hemispheres 234.0
1986 Male, age 76, both hemispheres 226.0
2302 Female, age 91, both hemispheres 224.6
2741 Female, age 85, both hemispheres 188.8
2180 Male, age 61, both hemispheres 182.8

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 1.3
FF:10155-103A2 76 years, female 2.3
FF:10038-101F2 18-64 years, mixed 0.9
FF:10174-103C3 60 years, female 0.7

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