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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:51.9 nTPM
GTEx:51.9 nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.9
GTEx sample id Sample description nTPM
Retina
Average nTPM: 51.9
Samples: 105

Max nTPM: 92.2
Min nTPM: 19.8
Std nTPM: 14.5
Median nTPM:
499_1 55 years, female 92.2
142_1 61 years, female 90.9
32_1 67 years, male 90.0
352_1 62 years, male 85.8
81_1 67 years, male 84.6
149_1 88 years, male 78.7
126_1 63 years, male 74.7
115_1 83 years, male 73.4
119_1 70 years, female 71.6
99_1 64 years, male 70.0
35_1 74 years, female 68.2
162_1 79 years, female 67.2
109_1 81 years, female 66.7
404_1 82 years, female 66.2
137_1 83 years, male 65.8
355_1 70 years, female 65.1
414_1 84 years, female 64.8
9_1 66 years, female 63.5
490_1 67 years, female 63.4
145_1 84 years, male 63.0
406_1 79 years, male 62.8
217_1 76 years, male 62.4
163_1 78 years, male 62.3
425_1 59 years, female 62.0
117_1 61 years, male 61.9
153_1 70 years, female 61.9
313_1 79 years, female 61.7
389_1 86 years, female 61.3
237_1 82 years, male 61.1
468_1 89 years, male 60.5
396_1 62 years, male 59.3
335_1 73 years, female 59.1
394_1 75 years, female 58.2
375_1 74 years, female 57.8
266_1 85 years, male 57.6
466_1 57 years, female 57.1
526_1 61 years, male 56.9
6_1 73 years, female 56.8
350_1 84 years, female 56.7
218_1 71 years, female 56.6
307_1 66 years, female 56.0
447_1 81 years, male 55.8
243_1 75 years, male 55.7
518_1 75 years, female 55.7
415_1 77 years, female 55.6
177_1 74 years, male 54.0
321_1 62 years, female 53.8
324_1 76 years, male 53.6
316_1 62 years, male 53.1
386_1 76 years, male 52.6
173_1 67 years, male 52.1
503_1 68 years, male 50.6
89_1 63 years, male 50.4
18_1 88 years, male 49.6
349_1 83 years, male 49.5
246_1 77 years, male 49.1
314_1 67 years, male 49.0
405_1 91 years, male 48.9
139_1 64 years, female 48.8
286_1 68 years, female 48.2
291_1 76 years, male 48.2
354_1 81 years, female 48.2
265_1 87 years, male 46.8
480_1 63 years, male 46.8
379_1 60 years, male 46.0
491_1 89 years, female 45.5
495_1 57 years, female 45.4
517_1 88 years, male 44.8
311_1 78 years, male 44.6
318_1 68 years, male 44.3
413_1 59 years, female 44.0
322_1 76 years, male 43.6
189_1 76 years, male 43.5
17_1 71 years, male 43.4
41_1 94 years, female 43.3
43_1 64 years, female 43.3
376_1 75 years, female 43.3
317_1 60 years, male 43.0
120_1 70 years, female 42.2
319_1 81 years, male 42.1
348_1 84 years, male 41.7
315_1 62 years, female 41.5
501_1 88 years, male 40.6
2_1 77 years, female 40.2
506_1 65 years, male 39.2
351_1 91 years, male 38.7
42_1 85 years, male 37.2
4_1 88 years, female 36.5
229_1 69 years, female 36.2
172_1 72 years, female 35.5
293_1 68 years, female 35.5
384_1 83 years, male 35.4
288_1 66 years, female 35.0
320_1 89 years, female 34.8
254_1 77 years, female 34.4
452_1 88 years, female 34.1
347_1 72 years, male 33.9
356_1 87 years, female 33.0
295_1 61 years, female 32.2
353_1 82 years, female 32.1
292_1 71 years, male 30.7
251_1 78 years, male 30.5
377_1 82 years, female 26.3
308_1 70 years, female 22.2
264_1 73 years, female 19.8
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