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CYFIP1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:18.2 nTPM
HPA Brain:25.7 nTPM
GTEx:18.2 nTPM
FANTOM5:66.4 Scaled Tags Per Million
Pig:32.3 nTPM
Mouse:57.5 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068106
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 21.4
2846 Female, age 79, unknown 23.8
1854 Male, age 80, left hemisphere 23.7
1857 Female, age 85, left hemisphere 22.2
2289 Male, age 61, right hemisphere 21.8
1781 Male, age 74, unknown 21.5
2481 Female, age 94, left hemisphere 21.1
2290 Female, age 72, unknown 19.4
2288 Male, age 75, left hemisphere 17.9
Globus pallidus, externus
nTPM: 25.7
2395 Male, age 75, both hemispheres 40.4
2772 Female, age 79, unknown 24.0
1996 Male, age 80, right hemisphere 23.3
2646 Male, age 61, right hemisphere 21.9
2567 Female, age 72, unknown 18.8
Globus pallidus, internus
nTPM: 20.9
2037 Male, age 80, right hemisphere 27.1
2111 Female, age 85, right hemisphere 23.8
2778 Female, age 91, both hemispheres 22.0
1818 Male, age 74, unknown 21.4
2566 Female, age 72, unknown 20.1
2483 Female, age 94, right hemisphere 20.0
2287 Male, age 75, right hemisphere 12.2
Nucleus accumbens
nTPM: 18.9
1783 Male, age 74, unknown 22.9
2698 Female, age 72, unknown 20.3
2732 Male, age 80, right hemisphere 20.1
1806 Female, age 85, left hemisphere 19.9
2391 Female, age 94, left hemisphere 18.2
2286 Male, age 75, left hemisphere 17.8
1856 Female, age 91, right hemisphere 16.9
2824 Male, age 61, right hemisphere 15.1
Nucleus basalis of Meynert
nTPM: 20.7
2821 Male, age 75, both hemispheres 22.2
2393 Male, age 80, right hemisphere 22.0
2569 Male, age 61, both hemispheres 19.3
2484 Female, age 94, left hemisphere 19.2
Nucleus of the diagonal band
nTPM: 21.8
1812 Female, age 91, both hemispheres 24.5
2775 Male, age 80, right hemisphere 22.3
2029 Male, age 61, right hemisphere 21.7
1979 Male, age 74, unknown 20.8
2195 Female, age 85, both hemispheres 19.6
Putamen
nTPM: 20.4
2482 Female, age 94, left hemisphere 24.3
1829 Male, age 74, unknown 20.8
1937 Female, age 91, right hemisphere 20.7
2489 Female, age 72, unknown 20.7
1838 Male, age 80, right hemisphere 20.2
2466 Female, age 79, unknown 19.7
2647 Male, age 75, left hemisphere 16.5
Septal nuclei
nTPM: 24.5
2199 Male, age 80, right hemisphere 32.0
2394 Male, age 61, left hemisphere 24.8
2629 Female, age 94, right hemisphere 24.0
2009 Female, age 91, both hemispheres 23.8
2059 Female, age 85, both hemispheres 23.8
2031 Female, age 72, unknown 22.0
1960 Male, age 74, unknown 21.4
Stria terminalis, bed nucleus
nTPM: 20.4
2486 Female, age 94, both hemispheres 21.1
1974 Female, age 91, both hemispheres 20.3
2201 Male, age 74, unknown 19.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 18.2
Samples: 246

Max nTPM: 44.3
Min nTPM: 7.3
Std nTPM: 5.4
Median nTPM: 17.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 44.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 34.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 32.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 30.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 30.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 29.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 29.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 29.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 29.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 29.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 28.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 28.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 28.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 27.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 26.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 25.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 25.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 25.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 25.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 25.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 24.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 24.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 24.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 24.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 24.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 24.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 24.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 24.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 23.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 23.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 23.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 23.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 23.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 22.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 22.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 22.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 22.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 22.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 22.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 22.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 22.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 22.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 22.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 22.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 22.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 21.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 21.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 21.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 21.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 21.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 21.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 21.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 21.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 21.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 20.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 20.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 20.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 20.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 20.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 20.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 20.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 20.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 20.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 20.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 20.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 20.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 20.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 20.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 20.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 19.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 19.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 19.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 19.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 19.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 19.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 19.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 19.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 18.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 18.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 18.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 18.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 18.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 18.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 18.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 18.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 18.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 18.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 18.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 18.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 18.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 17.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 17.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 17.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 17.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 17.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 17.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 17.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 17.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 17.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 17.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 17.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 17.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 17.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 17.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 17.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 17.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 17.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 17.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 17.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 17.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 16.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 16.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 16.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 16.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 16.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 16.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 16.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 16.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 16.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 16.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 16.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 16.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 16.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 16.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 16.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 16.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 16.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 16.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 16.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 16.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 16.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 16.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 15.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 15.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 15.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 15.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 15.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 15.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 15.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 15.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 15.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 15.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 15.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 15.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 15.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 15.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 14.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 14.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 14.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 14.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 14.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 14.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 14.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 14.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 14.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 14.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 14.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 14.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 14.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 14.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 14.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 14.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 14.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 14.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 14.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 14.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 14.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 14.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 14.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 14.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 14.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 13.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 13.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 13.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 13.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 13.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 13.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 13.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 13.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 13.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 13.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 13.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 13.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 13.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 13.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 13.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 12.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 12.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 12.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 12.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 12.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 12.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 12.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 12.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 12.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 11.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 11.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 11.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 11.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 11.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 11.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 10.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 10.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 10.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 10.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 10.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 9.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 9.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 9.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 7.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 7.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 16.0
Samples: 246

Max nTPM: 46.8
Min nTPM: 5.8
Std nTPM: 4.9
Median nTPM: 15.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 46.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 36.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 32.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 31.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 29.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 28.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 28.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 26.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 26.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 25.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 24.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 24.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 23.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 23.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 23.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 23.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 22.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 22.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 22.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 22.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 22.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 22.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 21.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 21.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 21.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 21.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 21.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 21.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 20.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 20.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 20.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 20.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 19.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 19.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 19.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 19.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 19.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 19.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 19.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 19.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 19.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 19.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 19.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 19.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 19.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 19.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 18.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 18.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 18.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 18.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 18.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 18.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 18.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 18.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 18.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 18.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 18.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 18.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 18.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 18.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 17.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 17.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 17.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 17.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 17.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 17.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 17.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 17.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 17.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 17.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 17.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 17.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 17.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 17.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 17.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 16.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 16.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 16.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 16.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 16.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 16.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 16.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 16.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 16.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 16.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 16.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 16.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 16.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 16.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 16.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 16.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 16.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 16.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 16.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 15.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 15.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 15.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 15.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 15.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 15.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 15.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 15.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 15.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 15.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 15.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 15.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 15.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 15.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 15.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 15.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 15.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 15.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 15.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 15.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 15.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 15.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 15.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 15.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 15.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 15.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 15.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 14.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 14.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 14.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 14.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 14.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 14.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 14.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 14.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 14.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 14.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 14.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 14.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 14.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 14.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 14.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 14.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 14.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 14.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 14.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 14.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 14.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 14.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 14.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 14.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 14.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 14.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 14.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 14.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 14.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 14.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 14.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 14.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 13.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 13.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 13.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 13.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 13.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 13.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 13.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 13.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 13.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 13.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 13.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 13.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 13.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 13.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 13.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 13.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 13.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 13.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 13.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 13.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 13.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 13.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 13.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 13.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 13.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 13.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 13.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 13.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 13.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 13.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 13.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 12.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 12.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 12.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 12.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 12.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 12.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 12.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 12.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 12.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 12.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 12.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 12.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 12.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 12.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 12.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 12.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 11.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 11.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 11.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 11.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 11.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 11.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 11.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 11.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 11.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 10.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 10.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 10.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 10.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 10.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 10.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 10.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 10.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 10.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 10.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 9.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 9.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 9.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 9.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 9.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 9.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 8.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 8.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 8.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 8.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 7.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 6.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 5.8
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Brain - Putamen (basal ganglia)
Average nTPM: 16.5
Samples: 205

Max nTPM: 37.3
Min nTPM: 8.4
Std nTPM: 4.4
Median nTPM: 16.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 34.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 28.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 27.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 24.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 24.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 24.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 23.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 23.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 23.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 22.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 22.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 22.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 22.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 22.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 22.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 22.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 21.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 21.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 21.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 21.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 21.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 20.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 20.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 20.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 20.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 20.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 20.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 20.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 20.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 20.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 20.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 19.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 19.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 19.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 19.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 19.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 19.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 19.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 19.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 19.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 19.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 19.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 19.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 19.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 18.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 18.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 18.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 18.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 18.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 18.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 18.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 18.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 18.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 18.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 18.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 18.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 18.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 18.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 18.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 18.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 17.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 17.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 17.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 17.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 17.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 17.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 17.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 17.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 17.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 17.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 17.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 17.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 17.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 16.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 16.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 16.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 16.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 16.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 16.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 16.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 16.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 16.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 16.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 16.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 16.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 16.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 16.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 16.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 15.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 15.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 15.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 15.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 15.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 15.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 15.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 15.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 15.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 15.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 15.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 15.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 15.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 15.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 14.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 14.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 14.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 14.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 14.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 14.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 14.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 14.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 14.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 14.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 14.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 14.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 14.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 14.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 14.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 14.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 14.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 13.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 13.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 13.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 13.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 13.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 13.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 13.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 13.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 13.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 13.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 13.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 13.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 13.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 13.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 13.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 13.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 12.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 12.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 12.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 12.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 12.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 12.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 12.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 12.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 12.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 12.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 12.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 12.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 11.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 11.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 11.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 10.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 10.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 10.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 10.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 9.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 9.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 9.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 8.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 8.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 53.6
FF:10164-103B2 76 years, female 53.6
Nucleus accumbens
Scaled Tags Per Million: 51.7
FF:10037-101F1 23-56 years, mixed 51.7
Putamen
Scaled Tags Per Million: 35.2
FF:10176-103C5 60 years, female 35.2
Globus pallidus
Scaled Tags Per Million: 66.4
FF:10161-103A8 76 years, female 92.9
FF:10175-103C4 60 years, female 40.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.3
Pig sample Sample description nTPM
Caudate
nTPM: 24.3
Samples: 4

Max nTPM: 26.7
Min nTPM: 22.2
Sample A Female 22.9
Sample B Female 26.7
Sample C Male 25.4
Sample D Male 22.2
Putamen
nTPM: 28.2
Samples: 4

Max nTPM: 32.7
Min nTPM: 24.2
Sample A Female 31.3
Sample B Female 24.2
Sample C Male 32.7
Sample D Male 24.5
Septum
nTPM: 32.4
Samples: 4

Max nTPM: 41.7
Min nTPM: 27.5
Sample A Female 30.9
Sample B Female 29.3
Sample C Male 41.7
Sample D Male 27.5
Ventral pallidum
nTPM: 27.7
Samples: 4

Max nTPM: 32.5
Min nTPM: 23.9
Sample A Female 23.9
Sample B Female 29.4
Sample C Male 32.5
Sample D Male 25.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 41.3
Samples: 4

Max nTPM: 44.0
Min nTPM: 39.9
Sample A Male 40.2
Sample B Male 39.9
Sample C Female 40.9
Sample D Female 44.0
Septum
nTPM: 57.5
Samples: 4

Max nTPM: 65.9
Min nTPM: 44.7
Sample A Male 44.7
Sample B Male 65.9
Sample C Female 57.7
Sample D Female 61.8
Ventral forebrain
nTPM: 41.3
Samples: 4

Max nTPM: 42.6
Min nTPM: 39.2
Sample A Male 39.2
Sample B Male 41.7
Sample C Female 41.5
Sample D Female 42.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
69014410 Antisense, RP_050310_01_A08, Mouse strain C57BL/6J (56 days, male) 0.0
74819653 Antisense, RP_060315_02_G09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
69014410 Antisense, RP_050310_01_A08, Mouse strain C57BL/6J (56 days, male) 0.0
74819653 Antisense, RP_060315_02_G09, Mouse strain C57BL/6J (56 days, male) 0.0

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