HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:60.6 nTPM
HPA Brain:124.6 nTPM
GTEx:60.6 nTPM
FANTOM5:72.5 Scaled Tags Per Million
Pig:73.4 nTPM
Mouse:55.9 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 124.6
Sample id Sample description nTPM
Hippocampus
nTPM: 85.7
2621 Female, age 67, right hemisphere 95.8
1898 Male, age 80, left hemisphere 92.4
2148 Female, age 91, left hemisphere 90.4
2529 Female, age 94, left hemisphere 87.2
1855 Male, age 76, left hemisphere 79.0
1911 Female, age 85, right hemisphere 69.5
Dentate gyrus
nTPM: 84.8
2531 Female, age 67, both hemispheres 96.0
2246 Female, age 85, both hemispheres 91.1
1927 Female, age 91, both hemispheres 90.1
2528 Male, age 74, both hemispheres 85.1
2530 Female, age 94, left hemisphere 77.5
2010 Male, age 76, both hemispheres 69.2
Entorhinal gyrus
nTPM: 96.9
2613 Female, age 94, left hemisphere 116.7
1938 Female, age 85, left hemisphere 110.1
1787 Male, age 76, left hemisphere 105.8
2764 Male, age 80, right hemisphere 102.9
2686 Male, age 75, right hemisphere 73.3
2117 Female, age 91, right hemisphere 72.8
Hippocampus, CA1
nTPM: 90.4
2749 Male, age 80, left hemisphere 112.0
2527 Male, age 74, both hemispheres 94.2
2082 Female, age 91, right hemisphere 85.2
1873 Female, age 85, both hemispheres 84.4
2045 Male, age 76, both hemispheres 76.3
Hippocampus, CA2
nTPM: 87.4
1963 Male, age 80, left hemisphere 101.4
2437 Female, age 94, left hemisphere 95.0
1892 Male, age 76, both hemispheres 92.7
2113 Female, age 91, right hemisphere 86.5
1940 Female, age 85, left hemisphere 75.4
2249 Male, age 74, both hemispheres 73.7
Hippocampus, CA3
nTPM: 89.8
2137 Male, age 80, left hemisphere 119.3
2620 Female, age 94, left hemisphere 96.2
2861 Female, age 67, both hemispheres 89.5
2436 Male, age 74, both hemispheres 81.3
1867 Male, age 76, both hemispheres 78.8
1891 Female, age 85, both hemispheres 73.8
Parahippocampal cortex
nTPM: 99.4
1850 Male, age 80, both hemispheres 123.9
2532 Female, age 72, left hemisphere 110.8
2245 Female, age 91, both hemispheres 110.5
2622 Female, age 67, right hemisphere 101.8
2693 Female, age 94, both hemispheres 100.8
1933 Female, age 85, both hemispheres 97.0
1990 Female, age 91, right hemisphere 94.3
2250 Female, age 67, right hemisphere 94.3
2692 Male, age 74, both hemispheres 86.5
2018 Male, age 76, both hemispheres 73.9
Perirhinal gyrus
nTPM: 124.6
2521 Female, age 94, right hemisphere 130.4
1847 Female, age 91, left hemisphere 129.2
1794 Male, age 80, right hemisphere 125.6
1841 Female, age 85, right hemisphere 119.3
2848 Male, age 76, right hemisphere 118.6
Subiculum
nTPM: 82.9
1977 Female, age 85, both hemispheres 96.6
2438 Female, age 94, left hemisphere 94.9
2619 Male, age 74, both hemispheres 90.9
2729 Female, age 91, right hemisphere 78.7
1901 Male, age 80, both hemispheres 75.3
2042 Male, age 76, both hemispheres 61.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 60.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.6
Samples: 197

Max nTPM: 123.5
Min nTPM: 12.0
Std nTPM: 17.3
Median nTPM: 60.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 111.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 104.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 104.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 103.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 99.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 95.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 95.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 94.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 93.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 92.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.5
FF:10153-102I9 76 years, female 81.6
FF:10169-103B7 60 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 73.4
Pig sample Sample description nTPM
Subiculum
nTPM: 72.9
Samples: 4

Max nTPM: 87.8
Min nTPM: 61.1
Sample A Female 87.8
Sample B Female 66.8
Sample C Male 75.8
Sample D Male 61.1
Dorsal hippocampus
nTPM: 71.9
Samples: 4

Max nTPM: 84.8
Min nTPM: 53.9
Sample A Female 84.8
Sample B Female 77.9
Sample C Male 71.0
Sample D Male 53.9
Entorhinal cortex
nTPM: 73.4
Samples: 4

Max nTPM: 80.3
Min nTPM: 65.9
Sample A Female 77.4
Sample B Female 65.9
Sample C Male 80.3
Sample D Male 69.8
Ventral hippocampus
nTPM: 71.9
Samples: 4

Max nTPM: 89.9
Min nTPM: 53.6
Sample A Female 59.9
Sample B Female 53.6
Sample C Male 89.9
Sample D Male 84.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 55.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.9
Samples: 4

Max nTPM: 64.4
Min nTPM: 52.4
Sample A Male 52.4
Sample B Male 53.5
Sample C Female 53.2
Sample D Female 64.4
Hippocampal formation
nTPM: 52.8
Samples: 4

Max nTPM: 56.6
Min nTPM: 46.8
Sample A Male 52.1
Sample B Male 56.6
Sample C Female 55.7
Sample D Female 46.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
69012687 Antisense, RP_050309_01_C06, Mouse strain C57BL/6J (56 days, male) 12.1

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