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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: High
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: High
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:77.5 nTPM
HPA Brain:151.1 nTPM
GTEx:77.5 nTPM
FANTOM5:704.2 Scaled Tags Per Million
Pig:85.2 nTPM
Mouse:60.2 nTPM
Allen mouse:0.6 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA067595Antibody HPA069443Antibody CAB022062
Bergmann glia - cytoplasm/membrane -Not detected-
Bergmann glia - nucleus -Not detected-
GLUC cells - cytoplasm/membrane -Not detected-
GLUC cells - nucleus -Not detected-
Purkinje cells Medium-High
Purkinje cells - cytoplasm/membrane -Not detected-
Purkinje cells - dendrites -Not detected-
Purkinje cells - nucleus -Not detected-
Cells in granular layer Not detected-Medium
Cells in molecular layer Not detected-Medium
Granular cells - cytoplasm/membrane -Not detected-
Granular cells - nucleus -Not detected-
Molecular layer - neuropil -High-
Molecular layer cells - cytoplasm/membrane -Not detected-
Molecular layer cells - nucleus -High-
Processes in granular layer -Not detected-
Processes in molecular layer -Not detected-
Synaptic glomeruli - capsule -Not detected-
Synaptic glomeruli - core -High-







CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.1
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 151.1
1768 Female, age 72, unknown 193.0
2006 Male, age 61, right hemisphere 179.5
2101 Male, age 74, right hemisphere 177.7
2003 Female, age 85, right hemisphere 146.6
1774 Male, age 80, left hemisphere 144.0
2055 Female, age 91, right hemisphere 141.4
1769 Male, age 76, right hemisphere 138.3
1788 Male, age 55, unknown 88.2
Cerebellar nuclei
nTPM: 118.0
1966 Female, age 91, left hemisphere 151.2
2783 Female, age 72, unknown 138.9
1871 Male, age 74, unknown 129.2
1879 Male, age 55, unknown 126.4
2005 Male, age 80, left hemisphere 112.0
2318 Male, age 74, left hemisphere 108.0
2175 Male, age 61, right hemisphere 101.6
2177 Female, age 85, both hemispheres 97.9
2882 Male, age 76, left hemisphere 96.9
Flocculonodular lobe
nTPM: 129.0
1765 Male, age 55, unknown 168.1
1792 Male, age 74, unknown 142.2
1771 Male, age 80, left hemisphere 136.0
2176 Female, age 91, right hemisphere 119.7
1767 Male, age 76, left hemisphere 119.4
2004 Male, age 61, right hemisphere 119.1
1835 Female, age 85, right hemisphere 98.1
Vermis
nTPM: 127.2
1751 Male, age 74, right hemisphere 173.5
1778 Female, age 91, left hemisphere 151.7
1928 Female, age 72, unknown 138.7
1770 Male, age 76, left hemisphere 130.4
1988 Female, age 85, left hemisphere 119.4
2834 Male, age 80, left hemisphere 116.6
1766 Male, age 55, unknown 115.2
2460 Male, age 61, both hemispheres 103.8
1825 Male, age 74, unknown 95.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 77.5
Samples: 215

Max nTPM: 125.4
Min nTPM: 39.4
Std nTPM: 14.7
Median nTPM: 76.8
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 125.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 118.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 111.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 110.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 110.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 110.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 109.5
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 108.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 106.5
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 106.5
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 103.2
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 103.0
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 102.5
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 102.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 100.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 100.0
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 98.1
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 98.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 97.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 95.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 95.1
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 95.1
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 93.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 93.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 93.7
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 93.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 93.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 93.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 93.3
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 93.2
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 93.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 92.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 92.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 92.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 92.8
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 91.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 91.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 91.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 91.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 91.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 90.9
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 90.6
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 90.3
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 89.8
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 89.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 88.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 88.3
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 87.9
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 86.7
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 86.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 86.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 86.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 86.0
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 85.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 85.2
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 84.6
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 84.6
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 84.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 84.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 83.9
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 83.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 83.8
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 83.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 83.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 83.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 83.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 83.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 83.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 83.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 83.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 83.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 82.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 82.5
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 82.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 82.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 82.3
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 82.3
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 82.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 82.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 82.1
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 82.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 81.8
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 81.6
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 80.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 80.9
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 80.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 80.7
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 80.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 80.5
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 80.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 80.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 80.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 80.0
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 79.8
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 79.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 79.7
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 79.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 79.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 79.1
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 78.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 78.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 78.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 78.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 77.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 77.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 77.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 77.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 76.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 76.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 76.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 76.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 76.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 76.0
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 75.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 75.9
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 75.6
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 75.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 75.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 75.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 75.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 74.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 74.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 74.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 74.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 74.3
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 74.2
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 74.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 73.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 73.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 73.8
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 73.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 73.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 72.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 72.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 72.8
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 72.3
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 72.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 72.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 72.0
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 71.9
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 71.6
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 71.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 71.0
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 70.9
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 70.8
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 70.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 70.8
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 70.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 70.7
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 70.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 70.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 70.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 70.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 70.2
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 70.0
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 70.0
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 69.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 69.6
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 69.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 69.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 69.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 69.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 68.9
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 68.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 68.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 68.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 68.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 67.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 67.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 66.8
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 66.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 66.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 65.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 65.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 65.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 65.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 64.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 64.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 63.8
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 63.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 63.5
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 62.9
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 62.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 62.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 62.3
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 62.0
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 61.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 61.7
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 60.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 60.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 60.4
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 60.3
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 59.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 59.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 59.2
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 59.0
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 59.0
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 58.1
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 57.0
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 56.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 55.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 54.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 54.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 53.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 53.6
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 50.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 50.0
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 49.6
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 49.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 47.9
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 47.8
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 47.6
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 42.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 41.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 39.4
Show allShow less
Brain - Cerebellum
Average nTPM: 64.9
Samples: 241

Max nTPM: 95.9
Min nTPM: 36.7
Std nTPM: 9.7
Median nTPM: 64.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 95.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 87.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 85.1
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 84.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 83.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 82.8
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 82.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 82.1
GTEX-RU72-2926-SM-2TF66 50-59 years, female 82.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 81.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 81.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 81.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 81.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 80.8
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 80.6
GTEX-WL46-2826-SM-3LK81 50-59 years, male 80.5
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 80.2
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 79.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 79.0
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 78.9
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 78.5
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 77.9
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 77.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 77.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 76.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 76.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 76.2
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 76.1
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 75.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 75.8
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 75.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 75.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 75.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 75.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 75.1
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 75.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 74.4
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 74.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 73.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 73.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 73.9
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 73.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 73.7
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 73.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 73.6
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 73.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 73.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 73.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 73.3
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 73.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 72.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 72.9
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 72.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 72.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 72.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 72.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 72.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 72.4
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 72.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 72.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 72.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 72.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 72.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 72.0
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 71.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 71.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 71.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 71.6
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 71.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 71.3
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 71.0
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 70.9
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 70.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 70.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 70.2
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 70.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 70.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 69.9
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 69.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 69.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 69.7
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 69.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 69.6
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 69.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 69.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 68.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 68.5
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 68.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 68.3
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 68.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 68.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 68.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 68.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 68.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 67.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 67.7
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 67.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 67.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 67.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 67.2
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 67.2
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 66.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 66.9
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 66.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 66.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 66.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 66.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 66.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 66.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 66.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 66.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 66.0
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 66.0
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 65.7
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 65.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 65.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 65.2
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 65.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 64.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 64.9
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 64.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 64.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 64.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 64.5
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 64.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 64.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 64.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 63.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 63.7
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 63.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 63.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 63.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 63.5
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 63.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 63.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 63.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 62.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 62.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 62.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 62.6
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 62.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 62.6
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 62.2
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 62.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 61.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 61.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 61.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 61.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 61.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 61.7
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 61.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 61.5
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 61.5
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 61.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 61.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 61.3
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 61.3
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 61.3
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 61.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 61.0
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 60.9
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 60.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 60.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 60.7
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 60.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 60.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 60.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 60.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 60.1
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 60.0
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 60.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 59.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 59.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 59.5
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 59.4
GTEX-17HII-2926-SM-79OMK 50-59 years, male 59.3
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 59.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 58.9
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 58.7
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 58.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 58.5
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 58.3
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 58.2
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 58.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 57.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 57.8
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 57.5
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 57.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 56.9
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 56.8
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 56.7
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 56.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 56.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 56.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 56.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 56.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 56.5
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 56.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 56.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 56.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 56.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 55.8
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 55.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 55.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 55.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 55.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 54.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 54.6
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 54.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 54.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 53.9
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 53.8
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 53.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 53.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 52.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 52.6
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 52.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 52.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 52.2
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 52.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 52.0
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 51.9
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 51.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 50.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 50.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 50.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 50.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 50.2
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 50.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 49.4
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 49.4
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 47.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 46.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 45.4
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 42.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 42.9
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 42.7
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 42.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 41.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 38.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 36.7
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

704.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 704.2
FF:10166-103B4 76 years, female 796.0
FF:10083-102B2 22-68 years, mixed 612.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 85.2
Samples: 4

Max nTPM: 122.4
Min nTPM: 63.8
Sample A Female 122.4
Sample B Female 75.7
Sample C Male 63.8
Sample D Male 79.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 60.3
Samples: 4

Max nTPM: 62.7
Min nTPM: 57.3
Sample A Male 62.1
Sample B Male 58.9
Sample C Female 57.3
Sample D Female 62.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.6
71487124 Antisense, RP_050913_01_C10, Mouse strain C57BL/6J (56 days, male) 0.6

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