HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Neuronal projections: Not detected
Synapses: Not detected
Mouse brain, Intensity
Hippocampal formationi 		227.085
RNA expressioni
Consensus:45.3 nTPM
HPA Brain:328.0 nTPM
GTEx:45.3 nTPM
FANTOM5:472.7 Scaled Tags Per Million
Pig:350.2 nTPM
Mouse:247.7 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA014850
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections High
Synapses Not detected

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014850
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA014850
Hippocampal formation mean intensity 227.085
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 209.311
Molecular layer of the dentate gyrus 42.765
Granular dentate gyrus 55.224
CA1 - oriens layer 37.907
CA1 - pyramidal layer 60.756
CA1 - radiatum layer 40.234
CA2 - oriens layer 68.719
CA2 - pyramidal layer 99.002
CA2 - radiatum layer 68.843
CA3 - oriens layer 148.518
CA3 - pyramidal layer 220.958
CA3 - radiatum layer 159.141
Stratum lucidum 227.085
Lacunosum moleculare 45.800
Subiculum 65.717

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 328.0
Sample id Sample description nTPM
Hippocampus
nTPM: 193.6
1898 Male, age 80, left hemisphere 385.3
2621 Female, age 67, right hemisphere 206.9
1855 Male, age 76, left hemisphere 167.6
2529 Female, age 94, left hemisphere 155.2
2148 Female, age 91, left hemisphere 124.3
1911 Female, age 85, right hemisphere 122.5
Dentate gyrus
nTPM: 210.2
2530 Female, age 94, left hemisphere 316.9
1927 Female, age 91, both hemispheres 210.6
2246 Female, age 85, both hemispheres 204.5
2010 Male, age 76, both hemispheres 190.1
2528 Male, age 74, both hemispheres 175.0
2531 Female, age 67, both hemispheres 164.3
Entorhinal gyrus
nTPM: 221.1
2613 Female, age 94, left hemisphere 309.9
2764 Male, age 80, right hemisphere 289.3
1938 Female, age 85, left hemisphere 211.8
1787 Male, age 76, left hemisphere 209.9
2686 Male, age 75, right hemisphere 198.7
2117 Female, age 91, right hemisphere 106.7
Hippocampus, CA1
nTPM: 232.7
2749 Male, age 80, left hemisphere 469.0
2527 Male, age 74, both hemispheres 224.5
1873 Female, age 85, both hemispheres 204.0
2082 Female, age 91, right hemisphere 147.0
2045 Male, age 76, both hemispheres 119.0
Hippocampus, CA2
nTPM: 267.3
2437 Female, age 94, left hemisphere 431.5
1892 Male, age 76, both hemispheres 400.3
1963 Male, age 80, left hemisphere 256.9
1940 Female, age 85, left hemisphere 191.1
2249 Male, age 74, both hemispheres 175.0
2113 Female, age 91, right hemisphere 149.1
Hippocampus, CA3
nTPM: 233.7
2137 Male, age 80, left hemisphere 384.5
1867 Male, age 76, both hemispheres 312.3
1891 Female, age 85, both hemispheres 211.9
2861 Female, age 67, both hemispheres 180.3
2620 Female, age 94, left hemisphere 159.4
2436 Male, age 74, both hemispheres 153.7
Parahippocampal cortex
nTPM: 252.5
2245 Female, age 91, both hemispheres 386.1
1850 Male, age 80, both hemispheres 332.1
2250 Female, age 67, right hemisphere 302.5
1990 Female, age 91, right hemisphere 292.7
2693 Female, age 94, both hemispheres 270.9
2622 Female, age 67, right hemisphere 232.4
1933 Female, age 85, both hemispheres 219.8
2532 Female, age 72, left hemisphere 194.0
2018 Male, age 76, both hemispheres 152.8
2692 Male, age 74, both hemispheres 141.4
Perirhinal gyrus
nTPM: 328.0
1847 Female, age 91, left hemisphere 377.7
2521 Female, age 94, right hemisphere 375.5
1794 Male, age 80, right hemisphere 348.2
1841 Female, age 85, right hemisphere 312.5
2848 Male, age 76, right hemisphere 226.0
Subiculum
nTPM: 269.2
2438 Female, age 94, left hemisphere 549.8
1901 Male, age 80, both hemispheres 315.1
1977 Female, age 85, both hemispheres 278.5
2619 Male, age 74, both hemispheres 248.7
2042 Male, age 76, both hemispheres 133.5
2729 Female, age 91, right hemisphere 89.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.3
Samples: 197

Max nTPM: 276.4
Min nTPM: 0.9
Std nTPM: 51.9
Median nTPM: 25.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 276.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 270.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 200.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 196.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 195.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 188.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 184.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 172.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 163.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 163.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 162.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 472.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 472.7
FF:10169-103B7 60 years, female 588.8
FF:10153-102I9 76 years, female 356.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 350.2
Pig sample Sample description nTPM
Subiculum
nTPM: 298.3
Samples: 4

Max nTPM: 402.2
Min nTPM: 207.2
Sample A Female 402.2
Sample B Female 230.6
Sample C Male 353.3
Sample D Male 207.2
Dorsal hippocampus
nTPM: 317.1
Samples: 4

Max nTPM: 392.0
Min nTPM: 196.9
Sample A Female 392.0
Sample B Female 314.9
Sample C Male 364.5
Sample D Male 196.9
Entorhinal cortex
nTPM: 249.3
Samples: 4

Max nTPM: 278.8
Min nTPM: 220.1
Sample A Female 278.8
Sample B Female 266.4
Sample C Male 220.1
Sample D Male 231.7
Ventral hippocampus
nTPM: 350.2
Samples: 4

Max nTPM: 423.8
Min nTPM: 269.0
Sample A Female 423.8
Sample B Female 269.0
Sample C Male 408.6
Sample D Male 299.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 247.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 175.7
Samples: 4

Max nTPM: 196.4
Min nTPM: 142.2
Sample A Male 195.4
Sample B Male 196.4
Sample C Female 168.7
Sample D Female 142.2
Hippocampal formation
nTPM: 247.7
Samples: 4

Max nTPM: 294.1
Min nTPM: 210.9
Sample A Male 210.9
Sample B Male 252.1
Sample C Female 294.1
Sample D Female 233.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
73512198 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 13.7
70919083 Antisense, RP_050712_04_B04, Mouse strain C57BL/6J (56 days, male) 9.6

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