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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:92.7 nTPM
HPA Brain:37.5 nTPM
GTEx:92.7 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:80.8 nTPM
Mouse:237.3 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042775Antibody HPA048147
Glial cells LowNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 37.5
2481 Female, age 94, left hemisphere 127.1
2288 Male, age 75, left hemisphere 39.8
1781 Male, age 74, unknown 33.2
1854 Male, age 80, left hemisphere 25.2
1857 Female, age 85, left hemisphere 24.9
2290 Female, age 72, unknown 24.9
2846 Female, age 79, unknown 18.8
2289 Male, age 61, right hemisphere 5.7
Globus pallidus, externus
nTPM: 13.9
1996 Male, age 80, right hemisphere 25.2
2772 Female, age 79, unknown 25.0
2646 Male, age 61, right hemisphere 11.1
2395 Male, age 75, both hemispheres 7.9
2567 Female, age 72, unknown 0.2
Globus pallidus, internus
nTPM: 36.4
2483 Female, age 94, right hemisphere 136.6
2287 Male, age 75, right hemisphere 48.2
1818 Male, age 74, unknown 25.8
2778 Female, age 91, both hemispheres 13.7
2037 Male, age 80, right hemisphere 12.4
2111 Female, age 85, right hemisphere 11.5
2566 Female, age 72, unknown 6.3
Nucleus accumbens
nTPM: 36.8
2391 Female, age 94, left hemisphere 148.2
2286 Male, age 75, left hemisphere 50.9
1856 Female, age 91, right hemisphere 24.8
1806 Female, age 85, left hemisphere 23.1
1783 Male, age 74, unknown 15.0
2698 Female, age 72, unknown 14.7
2824 Male, age 61, right hemisphere 10.3
2732 Male, age 80, right hemisphere 7.3
Nucleus basalis of Meynert
nTPM: 15.6
2821 Male, age 75, both hemispheres 29.9
2569 Male, age 61, both hemispheres 19.2
2393 Male, age 80, right hemisphere 8.6
2484 Female, age 94, left hemisphere 4.9
Nucleus of the diagonal band
nTPM: 19.4
1812 Female, age 91, both hemispheres 28.6
2775 Male, age 80, right hemisphere 20.6
1979 Male, age 74, unknown 18.4
2195 Female, age 85, both hemispheres 18.3
2029 Male, age 61, right hemisphere 11.2
Putamen
nTPM: 27.9
2482 Female, age 94, left hemisphere 105.3
2466 Female, age 79, unknown 30.4
1937 Female, age 91, right hemisphere 23.3
1838 Male, age 80, right hemisphere 18.1
1829 Male, age 74, unknown 17.0
2647 Male, age 75, left hemisphere 1.1
2489 Female, age 72, unknown 0.2
Septal nuclei
nTPM: 16.0
2031 Female, age 72, unknown 42.2
2009 Female, age 91, both hemispheres 24.5
2059 Female, age 85, both hemispheres 16.4
1960 Male, age 74, unknown 10.3
2199 Male, age 80, right hemisphere 9.0
2394 Male, age 61, left hemisphere 5.0
2629 Female, age 94, right hemisphere 4.5
Stria terminalis, bed nucleus
nTPM: 17.5
1974 Female, age 91, both hemispheres 25.5
2201 Male, age 74, unknown 22.6
2486 Female, age 94, both hemispheres 4.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 85.6
Samples: 246

Max nTPM: 162.3
Min nTPM: 47.7
Std nTPM: 21.5
Median nTPM: 82.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 162.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 158.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 158.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 146.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 144.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 144.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 141.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 136.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 135.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 134.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 133.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 131.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 131.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 129.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 128.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 126.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 125.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 124.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 121.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 119.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 118.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 118.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 117.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 116.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 115.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 115.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 115.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 114.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 113.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 113.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 109.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 106.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 106.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 106.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 106.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 105.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 105.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 104.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 103.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 103.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 103.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 102.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 101.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 100.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 100.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 100.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 100.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 99.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 99.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 98.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 98.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 98.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 98.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 98.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 97.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 97.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 96.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 95.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 95.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 95.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 94.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 93.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 92.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 92.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 92.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 92.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 91.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 91.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 91.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 91.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 91.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 91.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 91.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 91.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 91.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 90.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 90.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 90.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 90.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 90.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 89.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 89.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 89.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 89.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 88.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 88.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 88.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 88.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 88.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 87.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 87.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 87.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 87.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 87.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 86.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 86.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 86.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 86.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 86.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 85.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 85.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 85.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 85.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 85.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 85.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 85.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 84.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 84.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 84.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 84.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 83.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 83.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 83.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 83.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 82.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 82.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 82.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 82.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 82.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 82.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 82.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 81.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 81.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 81.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 81.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 81.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 81.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 80.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 80.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 80.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 80.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 79.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 79.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 79.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 79.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 79.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 79.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 79.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 78.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 78.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 78.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 78.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 78.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 77.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 76.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 76.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 76.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 75.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 75.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 75.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 75.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 75.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 75.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 75.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 74.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 74.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 74.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 74.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 73.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 73.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 73.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 72.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 72.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 72.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 71.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 70.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 70.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 70.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 69.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 69.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 69.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 69.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 68.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 68.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 68.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 67.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 67.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 67.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 67.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 66.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 65.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 65.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 65.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 65.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 65.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 64.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 63.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 61.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 61.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 61.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 59.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 59.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 59.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 57.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 56.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 56.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 53.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 53.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 52.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 51.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 51.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 48.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 47.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 85.9
Samples: 246

Max nTPM: 183.4
Min nTPM: 48.8
Std nTPM: 19.4
Median nTPM: 83.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 183.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 175.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 158.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 134.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 129.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 129.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 127.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 126.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 125.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 124.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 123.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 120.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 119.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 117.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 116.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 115.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 114.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 114.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 113.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 112.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 111.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 110.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 109.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 109.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 109.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 109.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 108.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 107.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 107.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 107.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 107.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 107.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 106.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 106.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 105.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 105.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 104.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 104.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 104.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 103.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 103.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 103.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 102.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 102.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 102.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 102.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 101.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 101.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 100.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 99.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 98.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 98.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 98.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 98.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 98.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 97.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 97.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 96.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 96.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 96.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 96.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 96.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 96.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 96.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 95.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 95.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 95.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 94.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 94.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 93.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 93.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 93.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 93.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 93.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 92.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 92.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 91.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 91.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 90.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 90.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 90.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 89.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 89.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 89.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 89.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 89.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 89.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 88.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 88.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 88.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 88.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 88.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 87.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 87.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 87.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 87.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 86.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 86.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 86.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 86.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 86.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 86.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 85.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 85.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 85.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 85.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 85.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 85.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 84.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 84.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 84.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 84.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 84.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 84.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 84.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 84.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 84.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 83.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 83.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 83.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 82.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 82.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 82.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 81.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 81.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 81.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 80.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 80.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 80.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 79.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 79.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 79.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 79.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 79.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 79.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 78.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 78.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 78.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 78.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 78.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 78.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 78.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 78.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 77.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 77.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 77.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 77.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 76.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 76.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 76.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 76.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 76.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 75.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 75.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 75.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 75.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 75.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 75.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 75.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 75.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 74.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 74.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 74.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 74.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 74.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 73.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 73.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 73.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 72.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 72.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 72.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 72.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 72.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 72.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 72.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 72.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 71.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 71.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 71.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 71.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 71.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 71.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 71.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 70.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 70.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 70.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 70.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 70.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 70.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 70.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 69.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 69.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 69.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 69.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 69.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 69.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 69.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 69.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 69.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 69.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 68.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 68.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 68.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 68.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 68.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 67.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 66.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 66.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 66.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 66.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 66.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 65.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 65.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 65.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 63.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 63.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 63.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 62.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 62.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 62.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 61.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 61.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 60.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 60.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 60.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 59.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 58.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 58.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 57.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 57.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 56.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 53.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 51.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 49.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 48.8
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Brain - Putamen (basal ganglia)
Average nTPM: 92.7
Samples: 205

Max nTPM: 162.4
Min nTPM: 49.0
Std nTPM: 21.4
Median nTPM: 88.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 162.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 152.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 151.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 150.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 145.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 145.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 143.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 141.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 138.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 136.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 135.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 135.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 134.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 133.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 130.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 129.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 128.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 126.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 125.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 125.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 124.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 123.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 122.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 120.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 118.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 118.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 116.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 116.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 116.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 115.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 114.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 113.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 112.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 112.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 111.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 110.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 110.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 109.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 109.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 109.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 108.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 107.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 107.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 106.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 106.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 105.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 105.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 104.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 104.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 104.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 103.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 103.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 103.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 103.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 102.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 102.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 101.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 101.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 101.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 100.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 100.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 100.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 100.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 100.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 100.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 99.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 99.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 99.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 99.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 99.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 99.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 98.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 97.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 97.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 97.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 97.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 95.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 95.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 95.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 94.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 94.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 94.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 93.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 93.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 93.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 93.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 93.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 93.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 92.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 91.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 91.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 90.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 90.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 89.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 89.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 89.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 89.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 89.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 89.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 88.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 88.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 88.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 88.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 88.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 88.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 88.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 88.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 87.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 87.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 87.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 87.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 86.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 86.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 86.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 86.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 85.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 85.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 85.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 85.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 85.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 85.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 84.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 84.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 84.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 84.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 83.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 83.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 83.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 82.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 82.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 82.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 82.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 82.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 82.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 81.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 81.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 81.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 81.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 81.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 81.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 81.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 80.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 80.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 80.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 79.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 79.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 79.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 79.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 78.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 78.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 78.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 78.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 77.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 77.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 77.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 77.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 76.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 76.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 76.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 76.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 76.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 76.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 75.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 75.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 75.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 74.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 74.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 74.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 74.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 73.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 73.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 72.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 72.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 72.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 72.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 72.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 71.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 71.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 70.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 70.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 70.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 70.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 69.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 68.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 68.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 66.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 64.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 64.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 63.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 63.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 62.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 61.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 60.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 60.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 60.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 57.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 56.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 51.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 58.5
FF:10164-103B2 76 years, female 58.5
Nucleus accumbens
Scaled Tags Per Million: 64.2
FF:10037-101F1 23-56 years, mixed 64.2
Putamen
Scaled Tags Per Million: 70.2
FF:10176-103C5 60 years, female 70.2
Globus pallidus
Scaled Tags Per Million: 55.7
FF:10175-103C4 60 years, female 60.4
FF:10161-103A8 76 years, female 51.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.8
Pig sample Sample description nTPM
Caudate
nTPM: 67.9
Samples: 4

Max nTPM: 77.8
Min nTPM: 60.5
Sample A Female 63.9
Sample B Female 69.2
Sample C Male 77.8
Sample D Male 60.5
Putamen
nTPM: 80.8
Samples: 4

Max nTPM: 98.7
Min nTPM: 63.7
Sample A Female 84.6
Sample B Female 63.7
Sample C Male 98.7
Sample D Male 76.0
Septum
nTPM: 76.5
Samples: 4

Max nTPM: 88.3
Min nTPM: 70.3
Sample A Female 75.3
Sample B Female 70.3
Sample C Male 88.3
Sample D Male 72.2
Ventral pallidum
nTPM: 70.8
Samples: 4

Max nTPM: 84.1
Min nTPM: 57.4
Sample A Female 57.4
Sample B Female 80.7
Sample C Male 84.1
Sample D Male 60.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

237.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 208.6
Samples: 4

Max nTPM: 216.3
Min nTPM: 197.7
Sample A Male 212.6
Sample B Male 216.3
Sample C Female 197.7
Sample D Female 207.7
Septum
nTPM: 237.3
Samples: 4

Max nTPM: 257.2
Min nTPM: 217.0
Sample A Male 217.0
Sample B Male 253.5
Sample C Female 257.2
Sample D Female 221.5
Ventral forebrain
nTPM: 219.8
Samples: 4

Max nTPM: 248.9
Min nTPM: 197.5
Sample A Male 197.5
Sample B Male 221.4
Sample C Female 248.9
Sample D Female 211.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
634449 Antisense, RP_040907_02_H10, Mouse strain C57BL/6J (56 days, male) 1.2
Pallidum
Expression energy: 0.9
634449 Antisense, RP_040907_02_H10, Mouse strain C57BL/6J (56 days, male) 0.9

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