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DHRS11
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: Not detected
Enterocytes: High
Enterocytes - Microvilli: High
Goblet cells: High
Paneth cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:172.1 nTPM
HPA:172.1 nTPM
GTEx:95.2 nTPM
FANTOM5:516.3 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041226Antibody HPA048236Antibody HPA053623
Endocrine cells -Not detected-
Enterocytes -High-
Enterocytes - Microvilli -High-
Glandular cells High-High
Goblet cells -High-
Paneth cells -Not detected-







SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.1
overview
Male, age 65
Small intestine sample 232
nTPM: 236.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 181.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 128
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 142.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 95.2
Samples: 187

Max nTPM: 407.2
Min nTPM: 1.3
Std nTPM: 90.9
Median nTPM: 58.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 407.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 333.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 304.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 287.7
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 280.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 276.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 259.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 254.2
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 251.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 249.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 246.9
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 241.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 241.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 236.4
GTEX-ZTSS-0926-SM-59865 40-49 years, male 236.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 232.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 231.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 231.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 227.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 227.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 226.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 225.8
GTEX-14PN3-2026-SM-68729 60-69 years, female 224.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 224.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 222.8
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 221.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 219.7
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 217.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 215.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 213.0
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 212.9
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 211.3
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 211.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 207.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 204.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 202.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 201.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 200.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 196.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 195.6
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 192.4
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 186.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 184.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 183.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 181.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 179.3
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 176.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 171.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 170.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 162.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 162.4
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 160.4
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 158.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 158.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 156.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 155.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 152.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 139.1
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 135.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 133.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 132.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 128.7
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 128.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 121.2
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 118.4
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 118.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 118.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 117.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 112.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 111.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 104.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 101.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 97.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 96.2
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 93.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 93.2
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 93.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 86.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 81.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 78.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 78.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 78.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 77.4
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 77.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 76.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 76.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 75.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 75.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 75.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 74.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 68.8
GTEX-1C475-1426-SM-793CH 40-49 years, female 65.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 63.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 58.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 57.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 56.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 53.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 51.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 51.3
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 50.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 49.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 48.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 47.8
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 46.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 43.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 42.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 42.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 40.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 36.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 36.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 34.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 32.5
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 31.3
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 30.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 30.2
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 29.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 29.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 28.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 27.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 27.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 27.6
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 26.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 25.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 23.6
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 23.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 22.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 19.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 19.4
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 18.6
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 18.2
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 17.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 17.0
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 16.3
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 15.6
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 15.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 15.1
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 14.4
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 14.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 14.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 14.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 13.0
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 12.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 12.5
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 12.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 11.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 11.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 11.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 11.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 11.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 10.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 10.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 10.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 9.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 9.3
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 9.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 9.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 9.0
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 9.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 8.8
GTEX-1192X-2526-SM-59868 50-59 years, male 8.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 8.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 8.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 8.1
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 8.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 8.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 8.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 7.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 7.6
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 7.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 7.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 7.2
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 7.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 7.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 7.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 6.8
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 6.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 6.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 6.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 6.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 6.0
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 6.0
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 6.0
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 6.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 5.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 5.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 4.1
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1.3
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

516.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 516.3
FF:10024-101D6 15,40,85 years, mixed 516.3

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