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ENSG00000285458
HPA
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  • SUMMARY

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  • BRAIN

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  • ENSG00000285458
BRAIN CEREBRAL CORTEX Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebral cortex
CEREBRAL CORTEX - Expression summary
Protein expression
Cerebral cortexi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endothelial cells: Medium
Glial cells: Low
Neuronal cells: High
Neuropil: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1.4 nTPM
HPA:1.4 nTPM
HPA Brain:14.5 nTPM
HPA PFC Brain:1.2 nTPM
FANTOM5:6.7 Scaled Tags Per Million

CEREBRAL CORTEX - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057434
Endothelial cells Medium
Glial cells Low
Neuronal cells High
Neuropil Medium



CEREBRAL CORTEX - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.4
N/A
Male, age 5
Cerebral cortex sample 48
nTPM: 1.4
overview
Female, age 40
Cerebral cortex sample 105
nTPM: 1.5
Cell types%
Neuronal cells:
35

Glial cells and endothelial cells:
65

overview
Male, age 70
Cerebral cortex sample 106
nTPM: 1.3
Cell types%
Neuronal cells:
35

Glial cells and endothelial cells:
65


CEREBRAL CORTEX - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.5
Sample id Sample description nTPM
Angular gyrus
nTPM: 12.9
2602 Female, age 94, right hemisphere 15.2
2260 Female, age 72, left hemisphere 13.8
2221 Female, age 67, right hemisphere 13.2
1866 Male, age 76, both hemispheres 12.8
2265 Female, age 91, left hemisphere 12.7
1790 Male, age 76, right hemisphere 12.5
2103 Male, age 75, left hemisphere 12.3
2722 Male, age 61, left hemisphere 10.8
Anterior cingulate cortex, supragenual-dorsal
nTPM: 12.6
1896 Female, age 85, right hemisphere 13.4
2342 Female, age 94, right hemisphere 13.4
2472 Male, age 75, left hemisphere 12.9
2547 Male, age 74, left hemisphere 11.9
2478 Female, age 67, right hemisphere 11.6
Anterior cingulate cortex, supragenual-ventral
nTPM: 13.2
1950 Female, age 85, right hemisphere 13.7
1755 Female, age 94, right hemisphere 13.5
1761 Male, age 74, left hemisphere 13.2
2479 Female, age 67, right hemisphere 13.2
2538 Male, age 75, left hemisphere 12.6
Anterior insular cortex, dorsal
nTPM: 12.6
2001 Male, age 76, right hemisphere 14.8
2506 Female, age 94, right hemisphere 12.9
2670 Male, age 75, left hemisphere 11.7
2235 Female, age 91, right hemisphere 10.9
Anterior insular cortex, ventral
nTPM: 13.3
2262 Female, age 67, right hemisphere 15.2
2596 Male, age 75, left hemisphere 15.2
1852 Male, age 76, left hemisphere 13.9
2507 Female, age 94, left hemisphere 13.2
2757 Male, age 61, right hemisphere 11.3
1925 Female, age 91, left hemisphere 11.2
Area parastriata, inferior
nTPM: 12.6
2268 Male, age 61, right hemisphere 14.3
2421 Female, age 91, left hemisphere 14.2
1758 Female, age 72, right hemisphere 14.0
1760 Female, age 67, left hemisphere 12.9
2509 Female, age 94, left hemisphere 12.2
1789 Male, age 76, right hemisphere 10.4
2234 Male, age 75, left hemisphere 10.2
Area parastriata, parietal
nTPM: 12.1
2420 Male, age 75, left hemisphere 13.7
2680 Female, age 94, right hemisphere 12.6
2233 Male, age 61, right hemisphere 11.7
1785 Male, age 76, right hemisphere 11.6
2236 Female, age 91, left hemisphere 11.0
Area parastriata, superior
nTPM: 11.0
2419 Male, age 75, right hemisphere 15.4
1773 Female, age 91, left hemisphere 11.8
2684 Female, age 67, left hemisphere 10.9
2604 Female, age 94, right hemisphere 10.3
2435 Male, age 61, left hemisphere 9.6
2881 Male, age 76, left hemisphere 8.3
Area parastriata, temporal
nTPM: 12.8
2424 Female, age 67, left hemisphere 14.9
2267 Male, age 61, right hemisphere 13.4
2471 Male, age 75, left hemisphere 12.5
2681 Female, age 94, right hemisphere 12.2
1804 Male, age 76, right hemisphere 11.0
Area striata
nTPM: 14.5
2417 Male, age 61, right hemisphere 18.8
2427 Female, age 91, left hemisphere 18.7
1753 Female, age 72, right hemisphere 13.8
2002 Female, age 91, right hemisphere 12.3
1884 Male, age 76, left hemisphere 12.0
2679 Female, age 94, right hemisphere 11.7
Claustrum
nTPM: 12.3
1956 Male, age 74, unknown 13.5
2491 Male, age 75, both hemispheres 13.3
2284 Female, age 91, both hemispheres 13.2
2392 Female, age 94, both hemispheres 12.9
2568 Male, age 61, both hemispheres 12.5
2292 Female, age 85, both hemispheres 12.1
2645 Female, age 72, unknown 11.4
2196 Female, age 79, unknown 10.9
2198 Male, age 80, both hemispheres 10.8
Frontal eye field
nTPM: 12.8
2543 Male, age 74, left hemisphere 14.4
2761 Female, age 94, left hemisphere 14.0
2441 Male, age 75, left hemisphere 12.7
2147 Male, age 61, left hemisphere 10.0
Frontal operculum
nTPM: 13.4
2348 Male, age 75, left hemisphere 14.0
2781 Female, age 85, right hemisphere 13.6
2030 Male, age 61, right hemisphere 12.7
Fusiform gyrus
nTPM: 12.5
2433 Female, age 72, left hemisphere 16.9
2431 Male, age 75, right hemisphere 14.2
2112 Male, age 80, both hemispheres 12.8
2617 Female, age 94, left hemisphere 12.5
2784 Female, age 85, left hemisphere 10.9
1807 Male, age 76, left hemisphere 10.1
2074 Female, age 91, left hemisphere 10.0
Inferior frontal gyrus, opercular
nTPM: 9.8
2875 Female, age 67, left hemisphere 11.1
2867 Male, age 75, left hemisphere 10.9
2868 Male, age 75, right hemisphere 10.8
2872 Female, age 94, right hemisphere 10.4
2873 Female, age 85, left hemisphere 10.2
2874 Female, age 85, right hemisphere 10.1
2871 Female, age 94, left hemisphere 9.9
2865 Male, age 61, left hemisphere 8.7
2869 Male, age 74, left hemisphere 8.7
2866 Male, age 61, right hemisphere 7.4
Inferior parietal lobule
nTPM: 13.7
2418 Male, age 75, left hemisphere 18.3
2599 Female, age 94, left hemisphere 13.0
2876 Male, age 76, right hemisphere 12.4
2606 Female, age 67, right hemisphere 11.1
Inferior temporal gyrus
nTPM: 12.2
2689 Female, age 94, right hemisphere 13.6
1880 Male, age 80, right hemisphere 12.4
1808 Male, age 76, left hemisphere 11.8
1965 Female, age 91, left hemisphere 11.8
2430 Male, age 75, right hemisphere 11.8
1970 Female, age 85, right hemisphere 11.6
Intraparietal deep sulcus
nTPM: 11.6
2102 Female, age 91, left hemisphere 12.3
2798 Male, age 76, left hemisphere 12.0
2600 Female, age 94, right hemisphere 11.9
2607 Female, age 67, right hemisphere 11.8
2669 Male, age 75, left hemisphere 11.2
2230 Male, age 61, right hemisphere 10.6
Lingual gyrus
nTPM: 11.7
2618 Female, age 94, left hemisphere 12.7
2838 Male, age 80, right hemisphere 11.9
1893 Male, age 76, left hemisphere 11.4
2688 Male, age 75, right hemisphere 11.3
2073 Female, age 85, left hemisphere 11.0
Middle cingulate cortex
nTPM: 13.1
2357 Female, age 67, right hemisphere 15.8
2539 Male, age 75, left hemisphere 13.5
2028 Female, age 85, left hemisphere 12.9
2640 Female, age 94, right hemisphere 12.2
2633 Male, age 74, left hemisphere 10.8
Middle temporal gyrus
nTPM: 12.5
2034 Female, age 91, right hemisphere 15.0
1799 Male, age 76, left hemisphere 12.3
2611 Male, age 75, right hemisphere 11.8
2616 Female, age 94, left hemisphere 11.7
1819 Male, age 80, right hemisphere 11.6
Occipital cortex
nTPM: 14.1
2426 Male, age 75, midline 19.0
1842 Male, age 76, right hemisphere 14.7
2470 Male, age 75, right hemisphere 12.7
2608 Female, age 67, both hemispheres 12.6
2677 Female, age 67, right hemisphere 11.7
Olfactory area
nTPM: 13.4
2352 Female, age 94, right hemisphere 18.3
2440 Male, age 75, left hemisphere 13.4
2756 Female, age 67, right hemisphere 12.5
2222 Female, age 67, right hemisphere 12.2
2542 Male, age 74, left hemisphere 12.2
1805 Female, age 85, right hemisphere 11.5
Olfactory tubercle
nTPM: 12.7
1998 Female, age 91, both hemispheres 13.9
2487 Female, age 94, left hemisphere 13.7
1846 Male, age 80, right hemisphere 12.1
2856 Male, age 75, right hemisphere 11.0
Orbitofrontal gyrus, anterior
nTPM: 10.8
2862 Female, age 85, left hemisphere 11.5
2863 Female, age 85, right hemisphere 10.5
2864 Female, age 67, left hemisphere 10.4
Paracentral lobule, anterior
nTPM: 13.2
2638 Female, age 94, right hemisphere 15.0
2474 Male, age 74, left hemisphere 14.6
1754 Male, age 75, left hemisphere 13.5
2340 Female, age 67, right hemisphere 12.8
1926 Male, age 61, left hemisphere 11.9
1776 Female, age 85, right hemisphere 11.6
Paracentral lobule, posterior
nTPM: 13.6
2345 Male, age 61, left hemisphere 16.9
1764 Male, age 74, right hemisphere 14.6
2446 Male, age 75, left hemisphere 12.7
2551 Female, age 94, right hemisphere 12.7
1775 Female, age 85, right hemisphere 11.3
Parietal operculum
nTPM: 14.1
2356 Female, age 67, right hemisphere 16.9
2552 Female, age 94, right hemisphere 14.3
1763 Male, age 74, left hemisphere 14.0
2719 Male, age 75, left hemisphere 11.4
Parieto-insular cortex
nTPM: 11.6
2508 Female, age 94, right hemisphere 12.1
2232 Male, age 61, right hemisphere 12.0
1976 Female, age 91, right hemisphere 11.3
2831 Male, age 76, right hemisphere 11.3
2671 Male, age 75, left hemisphere 11.0
Parieto-occipital transitional area
nTPM: 12.3
2270 Male, age 61, right hemisphere 15.1
2674 Female, age 94, right hemisphere 12.3
1784 Male, age 76, right hemisphere 12.1
2468 Male, age 75, left hemisphere 11.4
2683 Female, age 67, left hemisphere 10.6
Piriform cortex
nTPM: 13.2
2347 Male, age 75, right hemisphere 13.4
2153 Female, age 85, left hemisphere 13.0
Postcentral gyrus
nTPM: 12.6
2533 Male, age 75, right hemisphere 12.6
Postcentral gyrus, dorsal
nTPM: 12.3
2544 Male, age 74, left hemisphere 14.4
2339 Female, age 67, right hemisphere 13.7
1836 Female, age 85, right hemisphere 12.2
2350 Male, age 75, left hemisphere 11.9
2477 Female, age 94, right hemisphere 10.9
2151 Male, age 61, left hemisphere 10.5
Postcentral gyrus, middle
nTPM: 13.0
2444 Male, age 75, left hemisphere 14.1
2146 Female, age 67, right hemisphere 13.5
2545 Male, age 74, left hemisphere 13.2
1897 Female, age 85, right hemisphere 12.4
2248 Male, age 61, left hemisphere 11.9
Postcentral gyrus, ventral
nTPM: 13.3
2445 Male, age 75, left hemisphere 14.3
2024 Female, age 85, right hemisphere 13.0
2836 Female, age 94, right hemisphere 12.6
Posterior cingulate cortex
nTPM: 12.1
1759 Male, age 74, right hemisphere 13.4
2553 Female, age 94, right hemisphere 11.7
2473 Male, age 75, left hemisphere 11.0
Posterior cingulate cortex, dorsal
nTPM: 11.8
2076 Female, age 85, right hemisphere 13.3
2540 Male, age 75, right hemisphere 12.6
2634 Male, age 74, left hemisphere 11.7
2556 Female, age 67, right hemisphere 11.6
2343 Male, age 61, left hemisphere 11.1
2641 Female, age 94, right hemisphere 10.5
Posterior cingulate cortex, ventral
nTPM: 13.6
2346 Male, age 61, left hemisphere 15.6
1994 Female, age 85, right hemisphere 14.9
1762 Female, age 94, right hemisphere 13.4
2541 Male, age 75, right hemisphere 12.9
2448 Female, age 67, right hemisphere 12.8
2635 Male, age 74, left hemisphere 12.1
Posterior insular cortex
nTPM: 13.1
1823 Male, age 76, right hemisphere 14.4
2511 Female, age 67, right hemisphere 14.3
2597 Male, age 75, left hemisphere 13.2
2231 Male, age 61, left hemisphere 12.2
2603 Female, age 94, left hemisphere 12.2
2832 Female, age 91, right hemisphere 12.2
Precentral gyrus
nTPM: 11.8
2557 Male, age 75, right hemisphere 11.8
Precentral gyrus, dorsal
nTPM: 13.6
2354 Female, age 67, right hemisphere 15.4
1756 Male, age 74, left hemisphere 13.5
2476 Female, age 94, right hemisphere 12.8
2442 Male, age 75, left hemisphere 12.6
Precentral gyrus, middle
nTPM: 13.0
2443 Male, age 75, left hemisphere 14.3
2549 Female, age 94, right hemisphere 14.2
1909 Male, age 61, left hemisphere 12.5
1969 Female, age 67, right hemisphere 12.1
2475 Male, age 74, right hemisphere 11.9
Precentral gyrus, ventral
nTPM: 12.3
2662 Female, age 67, right hemisphere 12.9
2630 Male, age 75, left hemisphere 12.6
2550 Female, age 94, right hemisphere 12.1
2678 Male, age 74, left hemisphere 11.4
Precuneus
nTPM: 12.3
1780 Female, age 91, right hemisphere 14.1
2594 Male, age 61, left hemisphere 12.6
2673 Female, age 94, right hemisphere 12.2
1782 Male, age 76, right hemisphere 12.1
2510 Female, age 67, right hemisphere 11.8
2467 Male, age 75, right hemisphere 11.1
Premotor cortex, dorsal
nTPM: 13.2
2554 Female, age 67, right hemisphere 15.3
2536 Male, age 75, left hemisphere 13.3
1878 Female, age 85, right hemisphere 12.7
2027 Male, age 61, left hemisphere 12.6
2631 Male, age 74, left hemisphere 12.1
Premotor cortex, ventral
nTPM: 13.9
1757 Male, age 74, left hemisphere 15.3
1779 Male, age 61, left hemisphere 14.2
1881 Female, age 85, right hemisphere 14.1
1777 Female, age 67, left hemisphere 13.6
2349 Male, age 75, left hemisphere 13.5
2637 Female, age 94, right hemisphere 12.8
Retrosplenial cortex
nTPM: 11.3
1914 Male, age 76, right hemisphere 12.3
2675 Female, age 94, left hemisphere 10.9
1951 Male, age 61, right hemisphere 10.6
Subcentral gyrus, S2
nTPM: 12.8
2351 Male, age 75, left hemisphere 15.6
1964 Female, age 85, right hemisphere 13.4
2555 Female, age 67, right hemisphere 12.6
2839 Female, age 94, right hemisphere 12.3
2762 Male, age 74, left hemisphere 12.2
2072 Male, age 61, left hemisphere 10.7
Superior parietal lobule
nTPM: 11.6
1992 Female, age 91, right hemisphere 12.6
2605 Female, age 67, right hemisphere 11.5
2672 Female, age 94, right hemisphere 11.3
1800 Male, age 76, right hemisphere 11.2
2229 Male, age 61, right hemisphere 11.2
Superior temporal gyrus
nTPM: 13.0
2025 Male, age 80, right hemisphere 15.9
1843 Male, age 76, left hemisphere 15.6
2687 Male, age 75, right hemisphere 11.6
2615 Female, age 94, left hemisphere 11.3
1844 Female, age 91, left hemisphere 10.7
Supplementary motor cortex
nTPM: 13.8
2537 Male, age 75, left hemisphere 14.4
2632 Male, age 74, left hemisphere 14.1
1993 Male, age 61, left hemisphere 13.6
2548 Female, age 94, right hemisphere 13.0
Supramarginal gyrus
nTPM: 13.1
2415 Male, age 61, left hemisphere 14.9
1798 Male, age 76, right hemisphere 13.1
2513 Female, age 72, left hemisphere 12.8
1991 Female, age 91, right hemisphere 12.6
2601 Female, age 94, left hemisphere 12.1
Temporal pole
nTPM: 11.4
1826 Male, age 76, right hemisphere 13.6
2612 Female, age 94, left hemisphere 11.7
1853 Female, age 85, right hemisphere 11.2
1832 Female, age 91, left hemisphere 11.0
2518 Male, age 75, right hemisphere 9.3
Temporo-insular cortex, parainsular gyrus
nTPM: 14.1
2416 Male, age 61, right hemisphere 16.9
2676 Female, age 94, right hemisphere 14.2
1802 Male, age 76, left hemisphere 14.1
2512 Female, age 67, right hemisphere 13.8
2264 Female, age 91, right hemisphere 13.0
2598 Male, age 75, left hemisphere 12.3
Temporo-occipital transitional zone
nTPM: 11.9
2251 Female, age 85, right hemisphere 13.9
1900 Male, age 76, left hemisphere 11.1
1793 Male, age 80, right hemisphere 10.6
Transversal temporal gyrus, anterior
nTPM: 12.7
1888 Female, age 91, left hemisphere 13.3
1809 Male, age 76, right hemisphere 12.9
2522 Female, age 94, left hemisphere 12.7
1910 Male, age 80, right hemisphere 12.5
2610 Male, age 75, right hemisphere 11.9
Transversal temporal gyrus, posterior
nTPM: 12.8
2520 Male, age 75, right hemisphere 15.4
1922 Male, age 76, left hemisphere 13.9
2614 Female, age 94, left hemisphere 12.0
2833 Male, age 80, right hemisphere 11.8
1967 Female, age 91, right hemisphere 10.8

CEREBRAL CORTEX - HPA PFC Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.2
Sample id Sample description nTPM
Anterior cingulate gyrus, pregenual-dorsal
nTPM: 0.6
1518 Female, age 67, right hemisphere 1.0
1512 Male, age 75, left hemisphere 0.9
1513 Male, age 74, left hemisphere 0.8
1515 Female, age 94, right hemisphere 0.8
1514 Male, age 74, right hemisphere 0.6
1510 Male, age 61, left hemisphere 0.5
1517 Female, age 67, left hemisphere 0.5
1511 Male, age 61, right hemisphere 0.3
1516 Female, age 85, left hemisphere 0.3
Anterior cingulate gyrus, pregenual-ventral
nTPM: 0.5
1520 Male, age 75, right hemisphere 0.8
1521 Male, age 74, left hemisphere 0.7
1523 Female, age 67, left hemisphere 0.7
1519 Male, age 61, left hemisphere 0.3
1522 Male, age 74, right hemisphere 0.2
Anterior cingulate gyrus, subgenual
nTPM: 0.6
1525 Male, age 75, left hemisphere 1.0
1526 Male, age 75, right hemisphere 1.0
1530 Female, age 67, right hemisphere 0.9
1524 Male, age 61, left hemisphere 0.5
1527 Male, age 74, left hemisphere 0.5
1528 Male, age 74, right hemisphere 0.4
1529 Female, age 85, left hemisphere 0.1
Dorsolateral prefrontal cortex
nTPM: 0.7
1447 Female, age 94, left hemisphere 1.2
1450 Female, age 67, right hemisphere 0.9
1444 Male, age 75, left hemisphere 0.8
1446 Male, age 74, right hemisphere 0.8
1445 Male, age 75, right hemisphere 0.6
1449 Female, age 85, right hemisphere 0.5
1448 Female, age 94, right hemisphere 0.2
Dorsomedial prefrontal cortex
nTPM: 1.0
1443 Female, age 67, right hemisphere 1.8
1441 Male, age 75, left hemisphere 1.0
1439 Male, age 61, left hemisphere 0.7
1440 Male, age 61, right hemisphere 0.7
1442 Male, age 75, right hemisphere 0.7
Frontal cortex
nTPM: 0.6
1582 Female, age 67, left hemisphere 1.0
1583 Female, age 67, right hemisphere 1.0
1575 Male, age 75, right hemisphere 0.7
1580 Female, age 85, left hemisphere 0.7
1572 Male, age 61, left hemisphere 0.6
1576 Male, age 74, left hemisphere 0.6
1578 Female, age 94, left hemisphere 0.6
1579 Female, age 94, right hemisphere 0.6
1581 Female, age 85, right hemisphere 0.6
1577 Male, age 74, right hemisphere 0.5
1573 Male, age 61, right hemisphere 0.4
1574 Male, age 75, left hemisphere 0.4
Frontomarginal cortex
nTPM: 0.9
1471 Female, age 85, left hemisphere 2.2
1468 Male, age 74, left hemisphere 1.1
1472 Female, age 67, left hemisphere 1.1
1467 Male, age 75, right hemisphere 1.0
1470 Female, age 94, right hemisphere 0.8
1469 Female, age 94, left hemisphere 0.7
1473 Female, age 67, right hemisphere 0.6
1465 Male, age 61, left hemisphere 0.4
1466 Male, age 61, right hemisphere 0.4
Frontopolar cortex
nTPM: 1.2
1464 Female, age 67, right hemisphere 2.2
1462 Female, age 94, left hemisphere 1.5
1461 Male, age 75, right hemisphere 1.4
1463 Female, age 67, left hemisphere 1.4
1460 Male, age 75, left hemisphere 0.8
1458 Male, age 61, left hemisphere 0.4
1459 Male, age 61, right hemisphere 0.4
Gyrus rectus
nTPM: 0.7
1477 Male, age 75, right hemisphere 1.0
1479 Female, age 94, right hemisphere 1.0
1481 Female, age 67, left hemisphere 1.0
1480 Female, age 85, left hemisphere 0.9
1478 Female, age 94, left hemisphere 0.8
1475 Male, age 61, right hemisphere 0.5
1476 Male, age 75, left hemisphere 0.5
1474 Male, age 61, left hemisphere 0.2
Inferior frontal gyrus, orbital
nTPM: 0.6
1504 Male, age 74, left hemisphere 1.0
1505 Male, age 74, right hemisphere 0.9
1502 Male, age 75, left hemisphere 0.7
1503 Male, age 75, right hemisphere 0.7
1508 Female, age 85, right hemisphere 0.7
1506 Female, age 94, left hemisphere 0.6
1507 Female, age 85, left hemisphere 0.6
1509 Female, age 67, right hemisphere 0.5
1500 Male, age 61, left hemisphere 0.4
1501 Male, age 61, right hemisphere 0.4
Inferior frontal gyrus, triangular
nTPM: 0.5
1544 Male, age 75, right hemisphere 0.8
1549 Female, age 67, left hemisphere 0.8
1546 Female, age 94, right hemisphere 0.7
1547 Female, age 85, left hemisphere 0.7
1542 Male, age 61, left hemisphere 0.4
1543 Male, age 61, right hemisphere 0.4
1548 Female, age 85, right hemisphere 0.4
1545 Male, age 74, right hemisphere 0.2
Orbitofrontal gyrus, lateral
nTPM: 0.6
1494 Male, age 75, left hemisphere 0.8
1495 Female, age 94, left hemisphere 0.7
1498 Female, age 85, right hemisphere 0.7
1499 Female, age 67, right hemisphere 0.7
1496 Female, age 94, right hemisphere 0.6
1497 Female, age 85, left hemisphere 0.5
1493 Male, age 61, right hemisphere 0.4
Orbitofrontal gyrus, medial
nTPM: 0.9
1485 Male, age 74, left hemisphere 1.4
1484 Male, age 75, right hemisphere 1.2
1491 Female, age 67, left hemisphere 1.1
1492 Female, age 67, right hemisphere 1.1
1483 Male, age 75, left hemisphere 1.0
1486 Male, age 74, right hemisphere 0.9
1488 Female, age 94, right hemisphere 0.8
1489 Female, age 85, left hemisphere 0.8
1482 Male, age 61, left hemisphere 0.7
1490 Female, age 85, right hemisphere 0.5
1487 Female, age 94, left hemisphere 0.4
Orbitofrontal gyrus, posterior
nTPM: 0.7
1540 Female, age 67, left hemisphere 1.4
1538 Female, age 85, left hemisphere 0.8
1537 Female, age 94, right hemisphere 0.7
1539 Female, age 85, right hemisphere 0.7
1541 Female, age 67, right hemisphere 0.7
1533 Male, age 75, left hemisphere 0.6
1534 Male, age 75, right hemisphere 0.6
1535 Male, age 74, left hemisphere 0.6
1536 Female, age 94, left hemisphere 0.5
1531 Male, age 61, left hemisphere 0.4
1532 Male, age 61, right hemisphere 0.3
Subcallosal gyrus
nTPM: 0.7
1557 Female, age 94, right hemisphere 1.2
1552 Male, age 75, left hemisphere 1.0
1560 Female, age 67, left hemisphere 1.0
1550 Male, age 61, left hemisphere 0.8
1556 Female, age 94, left hemisphere 0.8
1551 Male, age 61, right hemisphere 0.7
1554 Male, age 74, left hemisphere 0.6
1558 Female, age 85, left hemisphere 0.6
1561 Female, age 67, right hemisphere 0.6
1553 Male, age 75, right hemisphere 0.5
1559 Female, age 85, right hemisphere 0.5
1555 Male, age 74, right hemisphere 0.4
Superior frontal gyrus
nTPM: 0.6
1565 Male, age 75, right hemisphere 1.1
1569 Female, age 85, left hemisphere 0.9
1566 Male, age 74, right hemisphere 0.8
1567 Female, age 94, left hemisphere 0.8
1568 Female, age 94, right hemisphere 0.8
1564 Male, age 75, left hemisphere 0.6
1571 Female, age 67, right hemisphere 0.5
1563 Male, age 61, right hemisphere 0.4
1570 Female, age 85, right hemisphere 0.4
1562 Male, age 61, left hemisphere 0.2
Temporal cortex
nTPM: 0.7
1591 Male, age 75, right hemisphere 1.3
1593 Male, age 74, right hemisphere 0.8
1596 Female, age 85, right hemisphere 0.8
1594 Female, age 94, left hemisphere 0.6
1590 Male, age 61, right hemisphere 0.5
1592 Male, age 74, left hemisphere 0.5
1595 Female, age 94, right hemisphere 0.3
Ventrolateral prefrontal cortex
nTPM: 0.9
1457 Female, age 67, right hemisphere 2.0
1451 Male, age 75, right hemisphere 0.9
1456 Female, age 67, left hemisphere 0.9
1455 Female, age 85, right hemisphere 0.8
1454 Female, age 94, left hemisphere 0.7
1452 Male, age 74, left hemisphere 0.6
1453 Male, age 74, right hemisphere 0.4
Ventromedial prefrontal cortex
nTPM: 0.8
1438 Female, age 67, left hemisphere 1.4
1434 Male, age 75, right hemisphere 0.9
1432 Male, age 61, left hemisphere 0.8
1437 Female, age 85, right hemisphere 0.8
1433 Male, age 61, right hemisphere 0.6
1435 Female, age 94, right hemisphere 0.5
1436 Female, age 85, left hemisphere 0.5

CEREBRAL CORTEX - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Occipital cortex
Scaled Tags Per Million: 6.7
FF:10163-103B1 76 years, female 6.7
Postcentral gyrus
Scaled Tags Per Million: 3.9
FF:10032-101E5 44-52 years, mixed 3.9
Frontal lobe
Scaled Tags Per Million: 6.1
FF:10040-101F4 32-61 years, mixed 6.1
Insula
Scaled Tags Per Million: 3.7
FF:10039-101F3 20-68 years, mixed 3.7
Medial frontal gyrus
Scaled Tags Per Million: 6.2
FF:10150-102I6 76 years, female 6.2
Medial temporal gyrus
Scaled Tags Per Million: 5.3
FF:10183-103D3 60 years, female 5.5
FF:10156-103A3 76 years, female 5.0
Occipital lobe
Scaled Tags Per Million: 4.6
FF:10076-102A4 27 years, male 4.6
Occipital pole
Scaled Tags Per Million: 2.7
FF:10036-101E9 22-68 years, mixed 2.7
Paracentral gyrus
Scaled Tags Per Million: 5.5
FF:10035-101E8 22-69 years, mixed 5.5
Parietal lobe
Scaled Tags Per Million: 5.5
FF:10034-101E7 35-89 years, mixed 5.9
FF:10157-103A4 76 years, female 5.4
FF:10171-103B9 60 years, female 5.1
Temporal lobe
Scaled Tags Per Million: 3.5
FF:10031-101E4 32-61 years, mixed 3.5

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