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TISSUE PRIMARY DATA CEREBRAL CORTEX Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION KIDNEY LIVER LUNG LYMPH NODE NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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VALIDATION
Dictionary
Cerebral cortex
Tissue proteome
Cerebral cortex
CEREBRAL CORTEX - Expression summary
Protein expression
Cerebral cortexi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endothelial cells: Not detected
Glial cells: Not detected
Neuronal cells: Not detected
Neuropil: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:6.4 nTPM
HPA:6.4 nTPM
HPA Brain:13.6 nTPM
HPA PFC Brain:9.9 nTPM
FANTOM5:53.7 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:5.4 nTPM
Allen mouse:5.7 Expression energy

CEREBRAL CORTEX - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051872
Endothelial cells Not detected
Glial cells Not detected
Neuronal cells Not detected
Neuropil Not detected



CEREBRAL CORTEX - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.4
N/A
Male, age 5
Cerebral cortex sample 48
nTPM: 3.5
overview
Female, age 40
Cerebral cortex sample 105
nTPM: 9.8
Cell types%
Neuronal cells:
35

Glial cells and endothelial cells:
65

overview
Male, age 70
Cerebral cortex sample 106
nTPM: 6
Cell types%
Neuronal cells:
35

Glial cells and endothelial cells:
65


CEREBRAL CORTEX - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.6
Sample id Sample description nTPM
Angular gyrus
nTPM: 10.8
2265 Female, age 91, left hemisphere 12.2
2260 Female, age 72, left hemisphere 11.8
2103 Male, age 75, left hemisphere 11.3
2722 Male, age 61, left hemisphere 11.3
1790 Male, age 76, right hemisphere 10.7
2602 Female, age 94, right hemisphere 10.6
1866 Male, age 76, both hemispheres 9.7
2221 Female, age 67, right hemisphere 8.6
Anterior cingulate cortex, supragenual-dorsal
nTPM: 11.0
2478 Female, age 67, right hemisphere 12.1
2472 Male, age 75, left hemisphere 11.9
2342 Female, age 94, right hemisphere 11.7
2547 Male, age 74, left hemisphere 10.6
1896 Female, age 85, right hemisphere 8.5
Anterior cingulate cortex, supragenual-ventral
nTPM: 10.2
1761 Male, age 74, left hemisphere 11.6
2479 Female, age 67, right hemisphere 10.5
1950 Female, age 85, right hemisphere 10.0
1755 Female, age 94, right hemisphere 9.5
2538 Male, age 75, left hemisphere 9.3
Anterior insular cortex, dorsal
nTPM: 10.1
2001 Male, age 76, right hemisphere 12.0
2670 Male, age 75, left hemisphere 10.3
2506 Female, age 94, right hemisphere 9.3
2235 Female, age 91, right hemisphere 8.6
Anterior insular cortex, ventral
nTPM: 10.8
2262 Female, age 67, right hemisphere 11.7
2757 Male, age 61, right hemisphere 11.5
2507 Female, age 94, left hemisphere 11.1
2596 Male, age 75, left hemisphere 10.7
1852 Male, age 76, left hemisphere 10.1
1925 Female, age 91, left hemisphere 9.9
Area parastriata, inferior
nTPM: 10.6
1758 Female, age 72, right hemisphere 11.5
2268 Male, age 61, right hemisphere 10.9
2421 Female, age 91, left hemisphere 10.9
2509 Female, age 94, left hemisphere 10.9
1789 Male, age 76, right hemisphere 10.4
1760 Female, age 67, left hemisphere 9.8
2234 Male, age 75, left hemisphere 9.7
Area parastriata, parietal
nTPM: 11.5
2233 Male, age 61, right hemisphere 13.1
2420 Male, age 75, left hemisphere 11.9
2236 Female, age 91, left hemisphere 11.6
2680 Female, age 94, right hemisphere 11.5
1785 Male, age 76, right hemisphere 9.5
Area parastriata, superior
nTPM: 9.6
2604 Female, age 94, right hemisphere 12.9
2435 Male, age 61, left hemisphere 9.9
1773 Female, age 91, left hemisphere 9.4
2419 Male, age 75, right hemisphere 8.6
2881 Male, age 76, left hemisphere 8.4
2684 Female, age 67, left hemisphere 8.0
Area parastriata, temporal
nTPM: 10.9
1804 Male, age 76, right hemisphere 12.1
2267 Male, age 61, right hemisphere 11.7
2424 Female, age 67, left hemisphere 11.2
2471 Male, age 75, left hemisphere 9.8
2681 Female, age 94, right hemisphere 9.7
Area striata
nTPM: 11.3
2002 Female, age 91, right hemisphere 15.3
1753 Female, age 72, right hemisphere 11.3
2427 Female, age 91, left hemisphere 10.9
1884 Male, age 76, left hemisphere 10.8
2679 Female, age 94, right hemisphere 10.7
2417 Male, age 61, right hemisphere 8.9
Claustrum
nTPM: 12.4
2196 Female, age 79, unknown 15.7
2645 Female, age 72, unknown 14.3
2284 Female, age 91, both hemispheres 12.8
2491 Male, age 75, both hemispheres 12.6
2392 Female, age 94, both hemispheres 12.1
2198 Male, age 80, both hemispheres 11.7
2292 Female, age 85, both hemispheres 11.7
2568 Male, age 61, both hemispheres 11.7
1956 Male, age 74, unknown 8.8
Frontal eye field
nTPM: 9.6
2147 Male, age 61, left hemisphere 10.2
2543 Male, age 74, left hemisphere 9.8
2441 Male, age 75, left hemisphere 9.5
2761 Female, age 94, left hemisphere 8.8
Frontal operculum
nTPM: 11.3
2030 Male, age 61, right hemisphere 13.0
2781 Female, age 85, right hemisphere 10.5
2348 Male, age 75, left hemisphere 10.3
Fusiform gyrus
nTPM: 11.1
2433 Female, age 72, left hemisphere 15.8
2112 Male, age 80, both hemispheres 12.8
1807 Male, age 76, left hemisphere 11.6
2074 Female, age 91, left hemisphere 10.7
2617 Female, age 94, left hemisphere 10.7
2784 Female, age 85, left hemisphere 9.0
2431 Male, age 75, right hemisphere 7.2
Inferior frontal gyrus, opercular
nTPM: 9.4
2869 Male, age 74, left hemisphere 12.6
2873 Female, age 85, left hemisphere 10.3
2866 Male, age 61, right hemisphere 9.8
2868 Male, age 75, right hemisphere 9.2
2874 Female, age 85, right hemisphere 9.2
2871 Female, age 94, left hemisphere 8.9
2872 Female, age 94, right hemisphere 8.9
2875 Female, age 67, left hemisphere 8.8
2865 Male, age 61, left hemisphere 8.7
2867 Male, age 75, left hemisphere 7.5
Inferior parietal lobule
nTPM: 9.6
2876 Male, age 76, right hemisphere 12.5
2599 Female, age 94, left hemisphere 8.9
2418 Male, age 75, left hemisphere 8.8
2606 Female, age 67, right hemisphere 8.1
Inferior temporal gyrus
nTPM: 11.1
1970 Female, age 85, right hemisphere 13.5
1965 Female, age 91, left hemisphere 12.8
1880 Male, age 80, right hemisphere 12.2
2689 Female, age 94, right hemisphere 10.1
2430 Male, age 75, right hemisphere 9.1
1808 Male, age 76, left hemisphere 9.0
Intraparietal deep sulcus
nTPM: 11.4
2102 Female, age 91, left hemisphere 13.8
2600 Female, age 94, right hemisphere 13.5
2607 Female, age 67, right hemisphere 12.6
2230 Male, age 61, right hemisphere 10.5
2669 Male, age 75, left hemisphere 10.5
2798 Male, age 76, left hemisphere 7.6
Lingual gyrus
nTPM: 10.4
2838 Male, age 80, right hemisphere 12.0
2073 Female, age 85, left hemisphere 10.9
2618 Female, age 94, left hemisphere 10.3
1893 Male, age 76, left hemisphere 9.8
2688 Male, age 75, right hemisphere 8.9
Middle cingulate cortex
nTPM: 11.4
2028 Female, age 85, left hemisphere 13.1
2357 Female, age 67, right hemisphere 12.0
2633 Male, age 74, left hemisphere 12.0
2640 Female, age 94, right hemisphere 10.3
2539 Male, age 75, left hemisphere 9.5
Middle temporal gyrus
nTPM: 10.8
1819 Male, age 80, right hemisphere 12.3
2034 Female, age 91, right hemisphere 11.2
1799 Male, age 76, left hemisphere 11.1
2616 Female, age 94, left hemisphere 10.5
2611 Male, age 75, right hemisphere 8.8
Occipital cortex
nTPM: 9.5
2426 Male, age 75, midline 10.6
1842 Male, age 76, right hemisphere 10.5
2677 Female, age 67, right hemisphere 9.5
2608 Female, age 67, both hemispheres 8.9
2470 Male, age 75, right hemisphere 8.1
Olfactory area
nTPM: 10.8
2542 Male, age 74, left hemisphere 12.7
2440 Male, age 75, left hemisphere 12.2
2756 Female, age 67, right hemisphere 10.9
1805 Female, age 85, right hemisphere 10.0
2222 Female, age 67, right hemisphere 9.5
2352 Female, age 94, right hemisphere 9.3
Olfactory tubercle
nTPM: 10.1
2487 Female, age 94, left hemisphere 10.8
2856 Male, age 75, right hemisphere 10.6
1846 Male, age 80, right hemisphere 10.3
1998 Female, age 91, both hemispheres 8.8
Orbitofrontal gyrus, anterior
nTPM: 12.0
2863 Female, age 85, right hemisphere 15.0
2862 Female, age 85, left hemisphere 11.1
2864 Female, age 67, left hemisphere 10.0
Paracentral lobule, anterior
nTPM: 8.9
1926 Male, age 61, left hemisphere 10.4
2474 Male, age 74, left hemisphere 10.3
2638 Female, age 94, right hemisphere 9.7
1776 Female, age 85, right hemisphere 8.1
1754 Male, age 75, left hemisphere 7.6
2340 Female, age 67, right hemisphere 7.3
Paracentral lobule, posterior
nTPM: 10.1
2345 Male, age 61, left hemisphere 12.2
2551 Female, age 94, right hemisphere 11.2
1764 Male, age 74, right hemisphere 10.6
2446 Male, age 75, left hemisphere 9.5
1775 Female, age 85, right hemisphere 7.0
Parietal operculum
nTPM: 9.4
1763 Male, age 74, left hemisphere 11.4
2552 Female, age 94, right hemisphere 10.6
2356 Female, age 67, right hemisphere 8.6
2719 Male, age 75, left hemisphere 7.0
Parieto-insular cortex
nTPM: 9.7
1976 Female, age 91, right hemisphere 12.5
2232 Male, age 61, right hemisphere 9.6
2508 Female, age 94, right hemisphere 9.4
2671 Male, age 75, left hemisphere 9.0
2831 Male, age 76, right hemisphere 7.9
Parieto-occipital transitional area
nTPM: 10.5
2683 Female, age 67, left hemisphere 12.4
2468 Male, age 75, left hemisphere 10.7
2270 Male, age 61, right hemisphere 10.6
2674 Female, age 94, right hemisphere 9.6
1784 Male, age 76, right hemisphere 9.3
Piriform cortex
nTPM: 13.6
2153 Female, age 85, left hemisphere 13.9
2347 Male, age 75, right hemisphere 13.3
Postcentral gyrus
nTPM: 9.8
2533 Male, age 75, right hemisphere 9.8
Postcentral gyrus, dorsal
nTPM: 9.5
1836 Female, age 85, right hemisphere 10.6
2544 Male, age 74, left hemisphere 9.9
2151 Male, age 61, left hemisphere 9.7
2339 Female, age 67, right hemisphere 9.6
2350 Male, age 75, left hemisphere 8.9
2477 Female, age 94, right hemisphere 8.2
Postcentral gyrus, middle
nTPM: 8.8
1897 Female, age 85, right hemisphere 11.3
2248 Male, age 61, left hemisphere 10.2
2444 Male, age 75, left hemisphere 9.8
2146 Female, age 67, right hemisphere 7.8
2545 Male, age 74, left hemisphere 4.7
Postcentral gyrus, ventral
nTPM: 10.1
2024 Female, age 85, right hemisphere 10.9
2836 Female, age 94, right hemisphere 10.5
2445 Male, age 75, left hemisphere 9.0
Posterior cingulate cortex
nTPM: 10.9
2553 Female, age 94, right hemisphere 12.4
1759 Male, age 74, right hemisphere 11.9
2473 Male, age 75, left hemisphere 8.3
Posterior cingulate cortex, dorsal
nTPM: 11.8
2556 Female, age 67, right hemisphere 14.3
2634 Male, age 74, left hemisphere 12.6
2540 Male, age 75, right hemisphere 12.2
2343 Male, age 61, left hemisphere 11.6
2076 Female, age 85, right hemisphere 11.1
2641 Female, age 94, right hemisphere 8.9
Posterior cingulate cortex, ventral
nTPM: 11.4
1994 Female, age 85, right hemisphere 12.8
2346 Male, age 61, left hemisphere 12.4
2448 Female, age 67, right hemisphere 12.1
2635 Male, age 74, left hemisphere 11.5
2541 Male, age 75, right hemisphere 10.3
1762 Female, age 94, right hemisphere 9.1
Posterior insular cortex
nTPM: 9.7
2603 Female, age 94, left hemisphere 12.3
2231 Male, age 61, left hemisphere 10.1
2511 Female, age 67, right hemisphere 10.0
1823 Male, age 76, right hemisphere 9.1
2832 Female, age 91, right hemisphere 9.0
2597 Male, age 75, left hemisphere 7.9
Precentral gyrus
nTPM: 9.0
2557 Male, age 75, right hemisphere 9.0
Precentral gyrus, dorsal
nTPM: 9.0
2476 Female, age 94, right hemisphere 11.1
2442 Male, age 75, left hemisphere 9.0
2354 Female, age 67, right hemisphere 8.8
1756 Male, age 74, left hemisphere 7.2
Precentral gyrus, middle
nTPM: 9.6
2475 Male, age 74, right hemisphere 10.3
1909 Male, age 61, left hemisphere 10.2
1969 Female, age 67, right hemisphere 9.5
2549 Female, age 94, right hemisphere 9.5
2443 Male, age 75, left hemisphere 8.2
Precentral gyrus, ventral
nTPM: 9.6
2550 Female, age 94, right hemisphere 10.7
2662 Female, age 67, right hemisphere 10.4
2630 Male, age 75, left hemisphere 9.1
2678 Male, age 74, left hemisphere 8.4
Precuneus
nTPM: 11.0
2467 Male, age 75, right hemisphere 12.4
2594 Male, age 61, left hemisphere 11.6
1782 Male, age 76, right hemisphere 11.0
2510 Female, age 67, right hemisphere 10.5
2673 Female, age 94, right hemisphere 10.4
1780 Female, age 91, right hemisphere 9.7
Premotor cortex, dorsal
nTPM: 10.2
2631 Male, age 74, left hemisphere 11.5
2536 Male, age 75, left hemisphere 11.0
2027 Male, age 61, left hemisphere 10.6
2554 Female, age 67, right hemisphere 10.1
1878 Female, age 85, right hemisphere 8.1
Premotor cortex, ventral
nTPM: 9.6
1757 Male, age 74, left hemisphere 10.9
1881 Female, age 85, right hemisphere 10.4
2637 Female, age 94, right hemisphere 10.3
2349 Male, age 75, left hemisphere 9.4
1777 Female, age 67, left hemisphere 8.5
1779 Male, age 61, left hemisphere 8.1
Retrosplenial cortex
nTPM: 11.0
2675 Female, age 94, left hemisphere 11.8
1951 Male, age 61, right hemisphere 11.4
1914 Male, age 76, right hemisphere 9.9
Subcentral gyrus, S2
nTPM: 11.7
2555 Female, age 67, right hemisphere 15.1
1964 Female, age 85, right hemisphere 13.1
2072 Male, age 61, left hemisphere 11.2
2351 Male, age 75, left hemisphere 11.2
2762 Male, age 74, left hemisphere 10.3
2839 Female, age 94, right hemisphere 9.3
Superior parietal lobule
nTPM: 10.4
2672 Female, age 94, right hemisphere 12.0
2605 Female, age 67, right hemisphere 11.5
2229 Male, age 61, right hemisphere 11.3
1800 Male, age 76, right hemisphere 8.5
1992 Female, age 91, right hemisphere 8.5
Superior temporal gyrus
nTPM: 11.8
2025 Male, age 80, right hemisphere 17.0
1843 Male, age 76, left hemisphere 11.4
2615 Female, age 94, left hemisphere 10.8
1844 Female, age 91, left hemisphere 10.1
2687 Male, age 75, right hemisphere 9.9
Supplementary motor cortex
nTPM: 10.6
2632 Male, age 74, left hemisphere 12.9
2548 Female, age 94, right hemisphere 10.3
2537 Male, age 75, left hemisphere 9.7
1993 Male, age 61, left hemisphere 9.5
Supramarginal gyrus
nTPM: 11.2
1991 Female, age 91, right hemisphere 12.4
2513 Female, age 72, left hemisphere 11.7
2415 Male, age 61, left hemisphere 10.9
1798 Male, age 76, right hemisphere 10.7
2601 Female, age 94, left hemisphere 10.2
Temporal pole
nTPM: 10.6
2518 Male, age 75, right hemisphere 12.2
2612 Female, age 94, left hemisphere 11.0
1853 Female, age 85, right hemisphere 10.9
1826 Male, age 76, right hemisphere 9.6
1832 Female, age 91, left hemisphere 9.2
Temporo-insular cortex, parainsular gyrus
nTPM: 11.8
2512 Female, age 67, right hemisphere 12.9
2264 Female, age 91, right hemisphere 12.7
2416 Male, age 61, right hemisphere 12.1
1802 Male, age 76, left hemisphere 11.7
2676 Female, age 94, right hemisphere 11.3
2598 Male, age 75, left hemisphere 9.9
Temporo-occipital transitional zone
nTPM: 10.6
1793 Male, age 80, right hemisphere 13.6
2251 Female, age 85, right hemisphere 10.7
1900 Male, age 76, left hemisphere 7.5
Transversal temporal gyrus, anterior
nTPM: 10.4
1888 Female, age 91, left hemisphere 11.8
2522 Female, age 94, left hemisphere 11.0
1910 Male, age 80, right hemisphere 10.6
1809 Male, age 76, right hemisphere 9.6
2610 Male, age 75, right hemisphere 9.1
Transversal temporal gyrus, posterior
nTPM: 11.1
1967 Female, age 91, right hemisphere 14.0
2520 Male, age 75, right hemisphere 11.5
2614 Female, age 94, left hemisphere 10.6
1922 Male, age 76, left hemisphere 9.7
2833 Male, age 80, right hemisphere 9.6

CEREBRAL CORTEX - HPA PFC Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.9
Sample id Sample description nTPM
Anterior cingulate gyrus, pregenual-dorsal
nTPM: 9.1
1515 Female, age 94, right hemisphere 16.9
1510 Male, age 61, left hemisphere 11.9
1511 Male, age 61, right hemisphere 10.2
1512 Male, age 75, left hemisphere 9.7
1513 Male, age 74, left hemisphere 8.3
1514 Male, age 74, right hemisphere 8.2
1518 Female, age 67, right hemisphere 5.9
1516 Female, age 85, left hemisphere 5.8
1517 Female, age 67, left hemisphere 5.2
Anterior cingulate gyrus, pregenual-ventral
nTPM: 8.2
1520 Male, age 75, right hemisphere 10.7
1519 Male, age 61, left hemisphere 9.8
1521 Male, age 74, left hemisphere 9.2
1523 Female, age 67, left hemisphere 6.2
1522 Male, age 74, right hemisphere 5.2
Anterior cingulate gyrus, subgenual
nTPM: 7.6
1526 Male, age 75, right hemisphere 9.9
1524 Male, age 61, left hemisphere 9.3
1529 Female, age 85, left hemisphere 8.1
1530 Female, age 67, right hemisphere 7.4
1525 Male, age 75, left hemisphere 7.1
1528 Male, age 74, right hemisphere 5.9
1527 Male, age 74, left hemisphere 5.2
Dorsolateral prefrontal cortex
nTPM: 7.8
1447 Female, age 94, left hemisphere 11.7
1448 Female, age 94, right hemisphere 9.2
1450 Female, age 67, right hemisphere 8.8
1444 Male, age 75, left hemisphere 7.4
1446 Male, age 74, right hemisphere 7.3
1449 Female, age 85, right hemisphere 5.6
1445 Male, age 75, right hemisphere 4.5
Dorsomedial prefrontal cortex
nTPM: 9.6
1443 Female, age 67, right hemisphere 11.7
1439 Male, age 61, left hemisphere 10.0
1442 Male, age 75, right hemisphere 9.6
1440 Male, age 61, right hemisphere 8.9
1441 Male, age 75, left hemisphere 7.9
Frontal cortex
nTPM: 8.1
1578 Female, age 94, left hemisphere 11.9
1572 Male, age 61, left hemisphere 11.4
1573 Male, age 61, right hemisphere 11.0
1579 Female, age 94, right hemisphere 10.4
1582 Female, age 67, left hemisphere 7.5
1577 Male, age 74, right hemisphere 7.3
1575 Male, age 75, right hemisphere 6.8
1583 Female, age 67, right hemisphere 6.7
1574 Male, age 75, left hemisphere 6.4
1580 Female, age 85, left hemisphere 6.4
1581 Female, age 85, right hemisphere 6.2
1576 Male, age 74, left hemisphere 5.7
Frontomarginal cortex
nTPM: 8.0
1466 Male, age 61, right hemisphere 14.7
1470 Female, age 94, right hemisphere 13.3
1472 Female, age 67, left hemisphere 9.1
1468 Male, age 74, left hemisphere 8.6
1469 Female, age 94, left hemisphere 7.8
1465 Male, age 61, left hemisphere 7.6
1471 Female, age 85, left hemisphere 5.4
1467 Male, age 75, right hemisphere 4.0
1473 Female, age 67, right hemisphere 1.7
Frontopolar cortex
nTPM: 9.7
1459 Male, age 61, right hemisphere 13.3
1458 Male, age 61, left hemisphere 11.5
1460 Male, age 75, left hemisphere 10.0
1461 Male, age 75, right hemisphere 10.0
1464 Female, age 67, right hemisphere 8.5
1462 Female, age 94, left hemisphere 8.0
1463 Female, age 67, left hemisphere 6.6
Gyrus rectus
nTPM: 9.6
1479 Female, age 94, right hemisphere 14.4
1478 Female, age 94, left hemisphere 14.0
1475 Male, age 61, right hemisphere 10.7
1477 Male, age 75, right hemisphere 9.4
1474 Male, age 61, left hemisphere 9.3
1480 Female, age 85, left hemisphere 6.8
1476 Male, age 75, left hemisphere 6.2
1481 Female, age 67, left hemisphere 5.7
Inferior frontal gyrus, orbital
nTPM: 8.4
1506 Female, age 94, left hemisphere 13.2
1500 Male, age 61, left hemisphere 11.3
1502 Male, age 75, left hemisphere 11.0
1509 Female, age 67, right hemisphere 10.1
1503 Male, age 75, right hemisphere 8.8
1501 Male, age 61, right hemisphere 7.8
1508 Female, age 85, right hemisphere 6.0
1505 Male, age 74, right hemisphere 5.5
1504 Male, age 74, left hemisphere 5.1
1507 Female, age 85, left hemisphere 5.1
Inferior frontal gyrus, triangular
nTPM: 8.0
1546 Female, age 94, right hemisphere 13.4
1543 Male, age 61, right hemisphere 12.1
1544 Male, age 75, right hemisphere 12.0
1542 Male, age 61, left hemisphere 7.9
1547 Female, age 85, left hemisphere 5.7
1548 Female, age 85, right hemisphere 5.0
1549 Female, age 67, left hemisphere 4.8
1545 Male, age 74, right hemisphere 3.4
Orbitofrontal gyrus, lateral
nTPM: 9.9
1495 Female, age 94, left hemisphere 11.2
1493 Male, age 61, right hemisphere 11.0
1496 Female, age 94, right hemisphere 10.6
1494 Male, age 75, left hemisphere 10.2
1498 Female, age 85, right hemisphere 10.0
1499 Female, age 67, right hemisphere 8.7
1497 Female, age 85, left hemisphere 7.6
Orbitofrontal gyrus, medial
nTPM: 7.9
1488 Female, age 94, right hemisphere 13.1
1487 Female, age 94, left hemisphere 11.2
1482 Male, age 61, left hemisphere 10.0
1483 Male, age 75, left hemisphere 9.8
1491 Female, age 67, left hemisphere 9.3
1484 Male, age 75, right hemisphere 7.9
1490 Female, age 85, right hemisphere 7.2
1492 Female, age 67, right hemisphere 7.1
1489 Female, age 85, left hemisphere 5.1
1485 Male, age 74, left hemisphere 4.1
1486 Male, age 74, right hemisphere 2.0
Orbitofrontal gyrus, posterior
nTPM: 9.9
1537 Female, age 94, right hemisphere 14.8
1536 Female, age 94, left hemisphere 12.5
1541 Female, age 67, right hemisphere 11.8
1534 Male, age 75, right hemisphere 11.6
1533 Male, age 75, left hemisphere 11.4
1531 Male, age 61, left hemisphere 10.2
1532 Male, age 61, right hemisphere 10.1
1540 Female, age 67, left hemisphere 9.4
1539 Female, age 85, right hemisphere 7.1
1538 Female, age 85, left hemisphere 6.4
1535 Male, age 74, left hemisphere 3.7
Subcallosal gyrus
nTPM: 8.4
1557 Female, age 94, right hemisphere 14.8
1550 Male, age 61, left hemisphere 10.8
1551 Male, age 61, right hemisphere 10.5
1552 Male, age 75, left hemisphere 9.8
1559 Female, age 85, right hemisphere 8.6
1556 Female, age 94, left hemisphere 8.2
1553 Male, age 75, right hemisphere 8.1
1558 Female, age 85, left hemisphere 7.8
1554 Male, age 74, left hemisphere 6.9
1560 Female, age 67, left hemisphere 5.9
1561 Female, age 67, right hemisphere 5.6
1555 Male, age 74, right hemisphere 3.9
Superior frontal gyrus
nTPM: 9.1
1567 Female, age 94, left hemisphere 13.9
1562 Male, age 61, left hemisphere 12.5
1565 Male, age 75, right hemisphere 10.8
1563 Male, age 61, right hemisphere 10.5
1568 Female, age 94, right hemisphere 9.9
1571 Female, age 67, right hemisphere 9.8
1564 Male, age 75, left hemisphere 6.6
1569 Female, age 85, left hemisphere 6.0
1570 Female, age 85, right hemisphere 5.9
1566 Male, age 74, right hemisphere 5.4
Temporal cortex
nTPM: 7.8
1591 Male, age 75, right hemisphere 13.1
1594 Female, age 94, left hemisphere 12.2
1595 Female, age 94, right hemisphere 11.0
1590 Male, age 61, right hemisphere 8.9
1596 Female, age 85, right hemisphere 4.7
1592 Male, age 74, left hemisphere 2.7
1593 Male, age 74, right hemisphere 2.1
Ventrolateral prefrontal cortex
nTPM: 7.2
1454 Female, age 94, left hemisphere 13.3
1456 Female, age 67, left hemisphere 8.9
1453 Male, age 74, right hemisphere 7.4
1452 Male, age 74, left hemisphere 7.3
1455 Female, age 85, right hemisphere 5.9
1451 Male, age 75, right hemisphere 5.7
1457 Female, age 67, right hemisphere 2.0
Ventromedial prefrontal cortex
nTPM: 9.4
1435 Female, age 94, right hemisphere 12.9
1432 Male, age 61, left hemisphere 12.3
1436 Female, age 85, left hemisphere 10.3
1438 Female, age 67, left hemisphere 8.9
1434 Male, age 75, right hemisphere 8.3
1433 Male, age 61, right hemisphere 7.4
1437 Female, age 85, right hemisphere 5.8

CEREBRAL CORTEX - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Occipital cortex
Scaled Tags Per Million: 43.3
FF:10163-103B1 76 years, female 43.3
Postcentral gyrus
Scaled Tags Per Million: 45.7
FF:10032-101E5 44-52 years, mixed 45.7
Frontal lobe
Scaled Tags Per Million: 39.7
FF:10040-101F4 32-61 years, mixed 39.7
Insula
Scaled Tags Per Million: 44.3
FF:10039-101F3 20-68 years, mixed 44.3
Medial frontal gyrus
Scaled Tags Per Million: 41.4
FF:10150-102I6 76 years, female 41.4
Medial temporal gyrus
Scaled Tags Per Million: 46.6
FF:10156-103A3 76 years, female 47.1
FF:10183-103D3 60 years, female 46.0
Occipital lobe
Scaled Tags Per Million: 33.9
FF:10076-102A4 27 years, male 33.9
Occipital pole
Scaled Tags Per Million: 53.7
FF:10036-101E9 22-68 years, mixed 53.7
Paracentral gyrus
Scaled Tags Per Million: 41.5
FF:10035-101E8 22-69 years, mixed 41.5
Parietal lobe
Scaled Tags Per Million: 41.9
FF:10034-101E7 35-89 years, mixed 46.3
FF:10171-103B9 60 years, female 42.3
FF:10157-103A4 76 years, female 37.1
Temporal lobe
Scaled Tags Per Million: 53.3
FF:10031-101E4 32-61 years, mixed 53.3

CEREBRAL CORTEX - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.3
Pig sample Sample description nTPM
Occipital cortex
nTPM: 29.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 26.5
Sample A Female 31.0
Sample B Female 27.0
Sample C Male 33.8
Sample D Male 26.5
Retrosplenial cortex
nTPM: 26.6
Samples: 4

Max nTPM: 30.3
Min nTPM: 23.4
Sample A Female 27.0
Sample B Female 25.7
Sample C Male 30.3
Sample D Male 23.4
Cingulate cortex
nTPM: 28.4
Samples: 4

Max nTPM: 32.5
Min nTPM: 24.2
Sample A Female 32.5
Sample B Female 24.2
Sample C Male 32.4
Sample D Male 24.5
Insular cortex
nTPM: 27.9
Samples: 4

Max nTPM: 33.1
Min nTPM: 23.4
Sample A Female 33.1
Sample B Female 24.9
Sample C Male 30.1
Sample D Male 23.4
Motor cortex
nTPM: 30.8
Samples: 4

Max nTPM: 33.8
Min nTPM: 25.2
Sample A Female 32.6
Sample B Female 31.7
Sample C Male 33.8
Sample D Male 25.2
Prefrontal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 35.3
Min nTPM: 26.9
Sample A Female 35.3
Sample B Female 31.1
Sample C Male 27.6
Sample D Male 26.9
Somatosensory cortex
nTPM: 31.3
Samples: 3

Max nTPM: 33.4
Min nTPM: 29.3
Sample B Female 29.3
Sample C Male 31.3
Sample D Male 33.4
Temporal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 34.7
Min nTPM: 27.0
Sample A Female 30.2
Sample B Female 29.2
Sample C Male 34.7
Sample D Male 27.0

CEREBRAL CORTEX - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.4
Mouse sample Sample description nTPM
Occipital cortex
nTPM: 4.3
Samples: 4

Max nTPM: 10.0
Min nTPM: 0.0
Sample A Male 10.0
Sample B Male 1.6
Sample C Female 0.0
Sample D Female 5.7
Frontal cortex
nTPM: 0.6
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.6
Sample D Female 1.7
Retrosplenial and cingulate cortex
nTPM: 5.4
Samples: 4

Max nTPM: 9.5
Min nTPM: 0.0
Sample A Male 9.5
Sample B Male 6.6
Sample C Female 5.6
Sample D Female 0.0
Somatosensory cortex
nTPM: 3.4
Samples: 4

Max nTPM: 10.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 3.7
Sample C Female 10.0
Sample D Female 0.0

CEREBRAL CORTEX - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.7
Allen experiment id Experiment description Expression energy
Cerebral cortex
Expression energy: 5.7
70445520 Antisense, RP_050614_04_A06, Mouse strain C57BL/6J (56 days, male) 5.7

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