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ENSG00000290147
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  • ENSG00000290147
TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION KIDNEY LIVER LUNG LYMPH NODE NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:45.7 nTPM
GTEx:45.7 nTPM
FANTOM5:0.0 Scaled Tags Per Million

RETINA - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA005561
Pigment epithelial cells Not detected
Photoreceptor cells High
Limiting membrane Not detected
Outer plexiform layer Not detected
Inner nuclear layer Not detected
Inner plexiform layer Not detected
Ganglion cells Not detected
Nerve fiber layer Medium

RETINA - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA075056
Pigment epithelial cells Not detected
Photoreceptor cells High
Limiting membrane Not detected
Outer plexiform layer Not detected
Inner nuclear layer Not detected
Inner plexiform layer Not detected
Ganglion cells Not detected
Nerve fiber layer Not detected

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 45.7
Samples: 105

Max nTPM: 166.8
Min nTPM: 0.0
Std nTPM: 46.9
Median nTPM:
352_1 62 years, male 166.8
246_1 77 years, male 162.9
163_1 78 years, male 162.6
251_1 78 years, male 135.0
218_1 71 years, female 131.8
425_1 59 years, female 131.5
229_1 69 years, female 130.6
243_1 75 years, male 129.1
319_1 81 years, male 125.8
321_1 62 years, female 121.0
172_1 72 years, female 113.7
405_1 91 years, male 113.1
355_1 70 years, female 111.2
316_1 62 years, male 109.5
406_1 79 years, male 106.6
386_1 76 years, male 106.5
177_1 74 years, male 102.4
237_1 82 years, male 101.5
292_1 71 years, male 96.3
318_1 68 years, male 96.0
291_1 76 years, male 92.1
293_1 68 years, female 87.8
480_1 63 years, male 87.0
404_1 82 years, female 86.5
320_1 89 years, female 80.9
350_1 84 years, female 79.9
447_1 81 years, male 79.1
189_1 76 years, male 77.3
376_1 75 years, female 76.3
377_1 82 years, female 74.3
349_1 83 years, male 74.2
503_1 68 years, male 74.0
322_1 76 years, male 70.6
335_1 73 years, female 67.4
517_1 88 years, male 67.3
389_1 86 years, female 66.7
153_1 70 years, female 65.8
353_1 82 years, female 55.8
348_1 84 years, male 53.5
354_1 81 years, female 51.0
347_1 72 years, male 49.5
468_1 89 years, male 47.9
286_1 68 years, female 47.4
384_1 83 years, male 45.4
9_1 66 years, female 45.1
115_1 83 years, male 45.1
6_1 73 years, female 44.9
265_1 87 years, male 39.4
254_1 77 years, female 38.7
217_1 76 years, male 37.4
317_1 60 years, male 36.8
266_1 85 years, male 36.1
324_1 76 years, male 35.4
351_1 91 years, male 33.2
506_1 65 years, male 30.2
173_1 67 years, male 26.3
518_1 75 years, female 26.2
2_1 77 years, female 25.7
311_1 78 years, male 23.4
99_1 64 years, male 21.1
81_1 67 years, male 21.0
18_1 88 years, male 19.8
394_1 75 years, female 18.1
526_1 61 years, male 15.2
264_1 73 years, female 14.7
295_1 61 years, female 12.8
35_1 74 years, female 11.9
452_1 88 years, female 9.6
356_1 87 years, female 7.7
375_1 74 years, female 5.7
126_1 63 years, male 5.2
145_1 84 years, male 2.5
379_1 60 years, male 1.3
137_1 83 years, male 0.6
4_1 88 years, female 0.0
17_1 71 years, male 0.0
32_1 67 years, male 0.0
41_1 94 years, female 0.0
42_1 85 years, male 0.0
43_1 64 years, female 0.0
89_1 63 years, male 0.0
109_1 81 years, female 0.0
117_1 61 years, male 0.0
119_1 70 years, female 0.0
120_1 70 years, female 0.0
139_1 64 years, female 0.0
142_1 61 years, female 0.0
149_1 88 years, male 0.0
162_1 79 years, female 0.0
288_1 66 years, female 0.0
307_1 66 years, female 0.0
308_1 70 years, female 0.0
313_1 79 years, female 0.0
314_1 67 years, male 0.0
315_1 62 years, female 0.0
396_1 62 years, male 0.0
413_1 59 years, female 0.0
414_1 84 years, female 0.0
415_1 77 years, female 0.0
466_1 57 years, female 0.0
490_1 67 years, female 0.0
491_1 89 years, female 0.0
495_1 57 years, female 0.0
499_1 55 years, female 0.0
501_1 88 years, male 0.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 0.0
FF:10030-101E3 24-65 years, mixed 0.0

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