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SOD2
HPA
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  • SOD2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SOD2
Synonyms GC1, GClnc1, IPOB, MnSOD
Gene descriptioni

Full gene name according to HGNC.

Superoxide dismutase 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Disease related genes
Enzymes
Human disease related genes
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q25.3
Chromosome location (bp) 159669069 - 159762529
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000291237 (version 109)
Entrez gene 6648
HGNC HGNC:11180
UniProt P04179 (UniProt - Evidence at protein level)
neXtProt NX_P04179
GeneCards SOD2
Antibodypedia SOD2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Oxidoreductase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Manganese, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is a member of the iron/manganese superoxide dismutase family. It encodes a mitochondrial protein that forms a homotetramer and binds one manganese ion per subunit. This protein binds to the superoxide byproducts of oxidative phosphorylation and converts them to hydrogen peroxide and diatomic oxygen. Mutations in this gene have been associated with idiopathic cardiomyopathy (IDC), premature aging, sporadic motor neuron disease, and cancer. Alternative splicing of this gene results in multiple transcript variants. A related pseudogene has been identified on chromosome 1. [provided by RefSeq, Apr 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SOD2-201
ENSP00000337127
ENST00000337404
P04179
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000303 [response to superoxide]
GO:0001836 [release of cytochrome c from mitochondria]
GO:0003069 [acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure]
GO:0004784 [superoxide dismutase activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006801 [superoxide metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0030145 [manganese ion binding]
GO:0030335 [positive regulation of cell migration]
GO:0032364 [oxygen homeostasis]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0046872 [metal ion binding]
GO:0051289 [protein homotetramerization]
GO:0070062 [extracellular exosome]
GO:0072593 [reactive oxygen species metabolic process]
GO:1902176 [negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway]
GO:1904706 [negative regulation of vascular associated smooth muscle cell proliferation]
GO:1905461 [positive regulation of vascular associated smooth muscle cell apoptotic process]
GO:1905932 [positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching]
Show all
183 aa
20.7 kDa
No 0
SOD2-202
ENSP00000356021
ENST00000367054
P04179
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000303 [response to superoxide]
GO:0001836 [release of cytochrome c from mitochondria]
GO:0003069 [acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure]
GO:0004784 [superoxide dismutase activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006801 [superoxide metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0030145 [manganese ion binding]
GO:0030335 [positive regulation of cell migration]
GO:0032364 [oxygen homeostasis]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0046872 [metal ion binding]
GO:0051289 [protein homotetramerization]
GO:0070062 [extracellular exosome]
GO:0072593 [reactive oxygen species metabolic process]
GO:1902176 [negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway]
GO:1904706 [negative regulation of vascular associated smooth muscle cell proliferation]
GO:1905461 [positive regulation of vascular associated smooth muscle cell apoptotic process]
GO:1905932 [positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching]
Show all
183 aa
20.7 kDa
No 0
SOD2-203
ENSP00000356022
ENST00000367055
P04179
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
A0A384NL29
[Target identity:100%; Query identity:100%] Superoxide dismutase
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000303 [response to superoxide]
GO:0001836 [release of cytochrome c from mitochondria]
GO:0003069 [acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure]
GO:0004784 [superoxide dismutase activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006801 [superoxide metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0030145 [manganese ion binding]
GO:0030335 [positive regulation of cell migration]
GO:0032364 [oxygen homeostasis]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0046872 [metal ion binding]
GO:0051289 [protein homotetramerization]
GO:0070062 [extracellular exosome]
GO:0072593 [reactive oxygen species metabolic process]
GO:1902176 [negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway]
GO:1904706 [negative regulation of vascular associated smooth muscle cell proliferation]
GO:1905461 [positive regulation of vascular associated smooth muscle cell apoptotic process]
GO:1905932 [positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching]
Show all
222 aa
24.7 kDa
No 0
SOD2-204
ENSP00000384196
ENST00000401980
G8JLJ2
[Direct mapping] Superoxide dismutase
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Show all
GO:0004784 [superoxide dismutase activity]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006801 [superoxide metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0046872 [metal ion binding]
Show all
61 aa
6.8 kDa
No 0
SOD2-205
ENSP00000404804
ENST00000444946
P04179
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000303 [response to superoxide]
GO:0001836 [release of cytochrome c from mitochondria]
GO:0003069 [acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure]
GO:0004784 [superoxide dismutase activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006801 [superoxide metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0030145 [manganese ion binding]
GO:0030335 [positive regulation of cell migration]
GO:0032364 [oxygen homeostasis]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0046872 [metal ion binding]
GO:0051289 [protein homotetramerization]
GO:0070062 [extracellular exosome]
GO:0072593 [reactive oxygen species metabolic process]
GO:1902176 [negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway]
GO:1904706 [negative regulation of vascular associated smooth muscle cell proliferation]
GO:1905461 [positive regulation of vascular associated smooth muscle cell apoptotic process]
GO:1905932 [positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching]
Show all
162 aa
18.3 kDa
No 0
SOD2-206
ENSP00000406713
ENST00000452684
G5E9P6
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Show all
GO:0004784 [superoxide dismutase activity]
GO:0005759 [mitochondrial matrix]
GO:0006801 [superoxide metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0046872 [metal ion binding]
GO:0072593 [reactive oxygen species metabolic process]
Show all
140 aa
15.8 kDa
No 0
SOD2-208
ENSP00000445015
ENST00000535561
F5H4R2
[Direct mapping] Superoxide dismutase
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Show all
GO:0004784 [superoxide dismutase activity]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006801 [superoxide metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0046872 [metal ion binding]
GO:0072593 [reactive oxygen species metabolic process]
Show all
183 aa
20 kDa
No 0
SOD2-209
ENSP00000439191
ENST00000537657
F5H3C5
[Direct mapping] Superoxide dismutase
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Show all
GO:0004784 [superoxide dismutase activity]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006801 [superoxide metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0046872 [metal ion binding]
GO:0072593 [reactive oxygen species metabolic process]
Show all
111 aa
12.1 kDa
No 0
SOD2-210
ENSP00000446252
ENST00000538183
P04179
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
A0A384NL29
[Target identity:100%; Query identity:100%] Superoxide dismutase
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000302 [response to reactive oxygen species]
GO:0000303 [response to superoxide]
GO:0001666 [response to hypoxia]
GO:0001836 [release of cytochrome c from mitochondria]
GO:0001889 [liver development]
GO:0003032 [detection of oxygen]
GO:0003069 [acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure]
GO:0003677 [DNA binding]
GO:0004784 [superoxide dismutase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006749 [glutathione metabolic process]
GO:0006801 [superoxide metabolic process]
GO:0006979 [response to oxidative stress]
GO:0007005 [mitochondrion organization]
GO:0007507 [heart development]
GO:0007568 [aging]
GO:0007626 [locomotory behavior]
GO:0008217 [regulation of blood pressure]
GO:0008285 [negative regulation of cell population proliferation]
GO:0008630 [intrinsic apoptotic signaling pathway in response to DNA damage]
GO:0008631 [intrinsic apoptotic signaling pathway in response to oxidative stress]
GO:0008637 [apoptotic mitochondrial changes]
GO:0009314 [response to radiation]
GO:0009409 [response to cold]
GO:0009410 [response to xenobiotic stimulus]
GO:0009791 [post-embryonic development]
GO:0010042 [response to manganese ion]
GO:0010043 [response to zinc ion]
GO:0010269 [response to selenium ion]
GO:0010332 [response to gamma radiation]
GO:0010729 [positive regulation of hydrogen peroxide biosynthetic process]
GO:0014823 [response to activity]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0019825 [oxygen binding]
GO:0019899 [enzyme binding]
GO:0022904 [respiratory electron transport chain]
GO:0030097 [hemopoiesis]
GO:0030145 [manganese ion binding]
GO:0030335 [positive regulation of cell migration]
GO:0031667 [response to nutrient levels]
GO:0032364 [oxygen homeostasis]
GO:0032496 [response to lipopolysaccharide]
GO:0033591 [response to L-ascorbic acid]
GO:0034021 [response to silicon dioxide]
GO:0034599 [cellular response to oxidative stress]
GO:0035900 [response to isolation stress]
GO:0035902 [response to immobilization stress]
GO:0042311 [vasodilation]
GO:0042542 [response to hydrogen peroxide]
GO:0042554 [superoxide anion generation]
GO:0042645 [mitochondrial nucleoid]
GO:0042743 [hydrogen peroxide metabolic process]
GO:0042802 [identical protein binding]
GO:0043066 [negative regulation of apoptotic process]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0045429 [positive regulation of nitric oxide biosynthetic process]
GO:0045599 [negative regulation of fat cell differentiation]
GO:0046686 [response to cadmium ion]
GO:0046872 [metal ion binding]
GO:0048147 [negative regulation of fibroblast proliferation]
GO:0048666 [neuron development]
GO:0048678 [response to axon injury]
GO:0048773 [erythrophore differentiation]
GO:0050665 [hydrogen peroxide biosynthetic process]
GO:0050790 [regulation of catalytic activity]
GO:0051289 [protein homotetramerization]
GO:0051602 [response to electrical stimulus]
GO:0051881 [regulation of mitochondrial membrane potential]
GO:0055072 [iron ion homeostasis]
GO:0055093 [response to hyperoxia]
GO:0070062 [extracellular exosome]
GO:0071000 [response to magnetism]
GO:0071361 [cellular response to ethanol]
GO:0072593 [reactive oxygen species metabolic process]
GO:1902176 [negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway]
GO:1902631 [negative regulation of membrane hyperpolarization]
GO:1904706 [negative regulation of vascular associated smooth muscle cell proliferation]
GO:1905461 [positive regulation of vascular associated smooth muscle cell apoptotic process]
GO:1905932 [positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching]
Show all
222 aa
24.7 kDa
No 0
SOD2-213
ENSP00000441362
ENST00000545162
F5GYZ5
[Direct mapping] Superoxide dismutase
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Show all
GO:0004784 [superoxide dismutase activity]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006801 [superoxide metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0046872 [metal ion binding]
GO:0072593 [reactive oxygen species metabolic process]
Show all
190 aa
21.1 kDa
No 0
SOD2-214
ENSP00000442920
ENST00000546087
P04179
[Direct mapping] Superoxide dismutase [Mn], mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Disease related genes
Potential drug targets
Human disease related genes
   Endocrine and metabolic diseases
   Diabetes
   Urinary system diseases
   Kidney diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000303 [response to superoxide]
GO:0001836 [release of cytochrome c from mitochondria]
GO:0003069 [acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure]
GO:0004784 [superoxide dismutase activity]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006801 [superoxide metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016491 [oxidoreductase activity]
GO:0019430 [removal of superoxide radicals]
GO:0030145 [manganese ion binding]
GO:0030335 [positive regulation of cell migration]
GO:0032364 [oxygen homeostasis]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0046872 [metal ion binding]
GO:0051289 [protein homotetramerization]
GO:0070062 [extracellular exosome]
GO:0072593 [reactive oxygen species metabolic process]
GO:1902176 [negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway]
GO:1904706 [negative regulation of vascular associated smooth muscle cell proliferation]
GO:1905461 [positive regulation of vascular associated smooth muscle cell apoptotic process]
GO:1905932 [positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching]
Show all
176 aa
19.7 kDa
No 0

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