HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:32.0 nTPM
HPA Brain:60.2 nTPM
GTEx:32.0 nTPM
FANTOM5:211.4 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:7.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056731
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 60.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.7
1911 Female, age 85, right hemisphere 37.7
2529 Female, age 94, left hemisphere 34.0
1855 Male, age 76, left hemisphere 33.1
2621 Female, age 67, right hemisphere 30.6
1898 Male, age 80, left hemisphere 25.5
2148 Female, age 91, left hemisphere 23.5
Dentate gyrus
nTPM: 28.9
2010 Male, age 76, both hemispheres 54.5
2246 Female, age 85, both hemispheres 27.2
2528 Male, age 74, both hemispheres 26.6
2530 Female, age 94, left hemisphere 24.8
2531 Female, age 67, both hemispheres 22.4
1927 Female, age 91, both hemispheres 17.9
Entorhinal gyrus
nTPM: 28.1
2117 Female, age 91, right hemisphere 39.6
1787 Male, age 76, left hemisphere 33.7
1938 Female, age 85, left hemisphere 27.5
2686 Male, age 75, right hemisphere 26.3
2764 Male, age 80, right hemisphere 23.1
2613 Female, age 94, left hemisphere 18.7
Hippocampus, CA1
nTPM: 31.1
2045 Male, age 76, both hemispheres 42.2
2082 Female, age 91, right hemisphere 34.4
2527 Male, age 74, both hemispheres 33.9
1873 Female, age 85, both hemispheres 28.2
2749 Male, age 80, left hemisphere 16.9
Hippocampus, CA2
nTPM: 34.7
2249 Male, age 74, both hemispheres 66.0
2113 Female, age 91, right hemisphere 36.6
1940 Female, age 85, left hemisphere 31.0
1892 Male, age 76, both hemispheres 27.7
2437 Female, age 94, left hemisphere 23.6
1963 Male, age 80, left hemisphere 23.4
Hippocampus, CA3
nTPM: 60.2
2436 Male, age 74, both hemispheres 214.8
1867 Male, age 76, both hemispheres 51.2
1891 Female, age 85, both hemispheres 40.5
2861 Female, age 67, both hemispheres 23.5
2137 Male, age 80, left hemisphere 18.8
2620 Female, age 94, left hemisphere 12.2
Parahippocampal cortex
nTPM: 33.2
2018 Male, age 76, both hemispheres 74.6
2692 Male, age 74, both hemispheres 32.4
2245 Female, age 91, both hemispheres 29.8
1933 Female, age 85, both hemispheres 29.6
1990 Female, age 91, right hemisphere 29.2
2532 Female, age 72, left hemisphere 29.2
2622 Female, age 67, right hemisphere 28.6
2250 Female, age 67, right hemisphere 27.3
2693 Female, age 94, both hemispheres 25.5
1850 Male, age 80, both hemispheres 25.3
Perirhinal gyrus
nTPM: 24.6
1841 Female, age 85, right hemisphere 28.5
2521 Female, age 94, right hemisphere 25.4
2848 Male, age 76, right hemisphere 25.1
1794 Male, age 80, right hemisphere 22.1
1847 Female, age 91, left hemisphere 22.0
Subiculum
nTPM: 40.7
2042 Male, age 76, both hemispheres 58.7
2438 Female, age 94, left hemisphere 40.7
1901 Male, age 80, both hemispheres 40.3
2619 Male, age 74, both hemispheres 37.6
1977 Female, age 85, both hemispheres 37.1
2729 Female, age 91, right hemisphere 29.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 32.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.0
Samples: 197

Max nTPM: 232.0
Min nTPM: 6.0
Std nTPM: 26.9
Median nTPM: 22.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 232.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 126.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 108.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 105.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 104.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 99.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 92.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 89.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 82.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 80.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 77.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 211.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.4
FF:10153-102I9 76 years, female 322.0
FF:10169-103B7 60 years, female 100.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.6
Pig sample Sample description nTPM
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 40.9
Min nTPM: 20.5
Sample A Female 20.5
Sample B Female 40.9
Sample C Male 27.7
Sample D Male 24.7
Dorsal hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 40.9
Min nTPM: 18.8
Sample A Female 20.4
Sample B Female 31.4
Sample C Male 40.9
Sample D Male 18.8
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.6
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 21.6
Sample C Male 21.5
Sample D Male 18.5
Ventral hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 36.7
Min nTPM: 23.3
Sample A Female 23.3
Sample B Female 36.7
Sample C Male 27.7
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.7
Sample A Male 9.3
Sample B Male 7.9
Sample C Female 7.0
Sample D Female 6.7
Hippocampal formation
nTPM: 7.0
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.2
Sample A Male 7.4
Sample B Male 6.2
Sample C Female 6.2
Sample D Female 8.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68546548 Antisense, RP_050120_02_F10, Mouse strain C57BL/6J (56 days, male) 0.0

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